Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2602 ATGGATCCGAGCTTGTTCTGGGGTCATCCTGAAAAGAGGGATTCATGGAGGACGATCTTCACTTTGGCTTACCAGAGCTTGGGAGTTGTTTATGGGGATTTGAGCACTTCTCCACTGTATGTGTACAAAAGCACTTTTGCAGAAAACATTCAGCACTCTGAGACGAATGAGGAGGTTTATGGGGTTCTTTGCTTTGTGTTTTGGACTTTGACACTTATCCCTTTACTTAAATATGTGTTCATAGTTCTTAGAGCTGATGATAATGGCGAAGGGGGAACTTTTGCTCTGTATTCTCTGCTCTGCCGCCATGCCCGGCTGAGCTCCCTCCCTAATCATCAGCTAGCAGATGAGGAGCTTTCTGCTTATACAAGAGATAGACCTGAACCCAGTAGCAATTTTAGTTTTAGTTCTTGTCTGAAATCAACTTTGGAGAAATGTAAAGTTTTGCAAAGAATGTTGCTTGTTCTTGCCTTGATTGGGACTTGCATGGTTATTGGAGATGGAGTGCTCACACCAGCAATTTCAGTTTTTTCTGCTGTGTCTGGGCTTGAGTTATCCATGGCTAAGGAACATCACCAATATATCGAAGTCCCTCTCGCGTGTGGCATATTGGTATTCTTATTCGCATTGCAACATTACGGAACGCATCAGGTCGGCTTCCTGTTTGCTCCAGTTGTAATAGTATGGCTTCTTTGCATCAGTGCCATTGGTTTGTACAATATCTTCTATTGGAATCCCTTGGTTTACAAAGCACTCTCACCATACTACATGTATAAGTTCTTGAAGAAAACCAGAAAGCAAGGTTGGATGGCGTTGGGCGGAATCCTCTTGTGTATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGACACTTCTCACAGTTTTCTATCAAGCTTGCTTTCACTTTCGCGGTTTATCCATCCTTGGTTCTTGCATACATGGGACAAGCTGCTTATCTTTCTAAGCATCACAATCTCGACAACGATTATCGAATCGGATTCTATGTTTCTGTTCCTGAGAAGGTAAGATGGCCAGTTCTTGCAATAGCAATACTTGCAGCAGTGGTGGGCAGTCAAGCGATCATCACCGGCACGTTTTCGATCATCAAACAATGTTCTGCTTTGGGTTGTTTCCCAAGAGTAAAGATCATCCATACGTCTTCGAAAATACACGGCCAGATTTACATTCCCCTGATCAACTGGATACTAATGATTTTGTGTTTGGCTGTTACCATTGGGTTTAGAGACACCAAACGCTTGGGCAATGCAGCAGGGTTGGCGGTTATAACCGTTATGCTCGTCTCGACTTGTCTGATGTCACTTGTCATCGTGTTATGTTGGCGTAAAAGTGTCTTGTTGGCCATAGCTTTCTTACTCTTCTTTGGCTCCATAGAAGCTCTCTACTTCTCTGCATCTCTTATTAAGTTCTTTGAAGGGGCTTGGGTTCCTATTGCTCTTGCACTAACCTTCCTTGTGGTTATGTATGTTTGGCATTATGGCACTCTAAAGAAATATGAGGCTGATGTTGAAAACAAAGTCCCTATTAATTGGCTCCTCAGTATAGGACCGAAAATCGGGATCGTTCGGGTTCGGGGGATCGGCCTTGTACATACCGAACTCGTCTCAGGGATCCCTGCCATTTTCTCTCATTTTGTCACCAACCTTCCAGCCTTTCACCAAATTCTAGTCTTCCTCTGCATCAAATCTGTCACAGTGCCTCATGTGAGACCTGAGGAAAGATTCTTGGTGGGAAGAGTTGGGCCAAAGGAGTATCGCCTCTACCGTTGCATCGCACGGTATGGATACCGTGACGTGCACAAGGACGACTTAGAGTTCGAGAGAGATCTTGCCTGCAGCATTGCAGAATTCATTCGATCCGAGAGAACAGAATGCAACACATTTAGACACCAAGACTTGGACGACAACGAAAGAATGACAGTGATTGGGACTTCATCAACACAACTAGACGGTATACGAATGTGTGAAAACGAAACGTACTCTTCTCCAATCATTGGCACTTCGGAGATAAAGTCCGAAAAGTTAAGGAAGAGAGTAAGGTTCGTGCTCCCGGAGAGTCCGAAAATGGATATCGATACGAGGGGAGAGTTGCAAGAGTTGATGGAAGCAAGGGAGGCAGGAATAGCATTCATAATGGGACATTCATATGTGAAGGCAAAGAAAGGATCAGGTTGGATGAAGAAACTTGTGATTAATTATGGCTATGATTTCTTGAGGAAGAATTCAAGAGGCCCATCTTATGCTTTGAGCATTCCTTATGCTTCTACTCTTGAGGTTGGTATGGTTTATTATGTTTAA 2316 43.74 MDPSLFWGHPEKRDSWRTIFTLAYQSLGVVYGDLSTSPLYVYKSTFAENIQHSETNEEVYGVLCFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARLSSLPNHQLADEELSAYTRDRPEPSSNFSFSSCLKSTLEKCKVLQRMLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMAKEHHQYIEVPLACGILVFLFALQHYGTHQVGFLFAPVVIVWLLCISAIGLYNIFYWNPLVYKALSPYYMYKFLKKTRKQGWMALGGILLCITGSEAMFADLGHFSQFSIKLAFTFAVYPSLVLAYMGQAAYLSKHHNLDNDYRIGFYVSVPEKVRWPVLAIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPLINWILMILCLAVTIGFRDTKRLGNAAGLAVITVMLVSTCLMSLVIVLCWRKSVLLAIAFLLFFGSIEALYFSASLIKFFEGAWVPIALALTFLVVMYVWHYGTLKKYEADVENKVPINWLLSIGPKIGIVRVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKSVTVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDVHKDDLEFERDLACSIAEFIRSERTECNTFRHQDLDDNERMTVIGTSSTQLDGIRMCENETYSSPIIGTSEIKSEKLRKRVRFVLPESPKMDIDTRGELQELMEAREAGIAFIMGHSYVKAKKGSGWMKKLVINYGYDFLRKNSRGPSYALSIPYASTLEVGMVYYV 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43649500 43653044 + Lag0029989.1 Lac8g2602 618436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2602 771 Pfam K+ potassium transporter integral membrane domain 22 519 IPR053951 -
Lac8g2602 771 NCBIfam potassium uptake protein 22 771 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac8g2602 771 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 771 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac8g2602 771 Pfam K+ potassium transporter C-terminal domain 532 769 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g1229 Lac-Chr13:10972602 Lac8g2602 Lac-Chr8:43649500 1.10E-267 transposed
Lac5g2705 Lac-Chr5:45521003 Lac8g2602 Lac-Chr8:43649500 4.90E-147 transposed
Lac7g1530 Lac-Chr7:16960675 Lac8g2602 Lac-Chr8:43649500 1.30E-167 transposed
Lac7g2853 Lac-Chr7:47672173 Lac8g2602 Lac-Chr8:43649500 4.40E-226 transposed
Lac8g0033 Lac-Chr8:587969 Lac8g2602 Lac-Chr8:43649500 5.20E-255 transposed
Lac8g0351 Lac-Chr8:4304917 Lac8g2602 Lac-Chr8:43649500 0.00E+00 transposed
Lac8g3091 Lac-Chr8:47547278 Lac8g2602 Lac-Chr8:43649500 6.00E-184 transposed
Lac13g0217 Lac-Chr13:1540578 Lac8g2602 Lac-Chr8:43649500 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2602 K03549 - csv:101218141 1475.3