Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac8g2609 | ATGGCGGGAAGATACTTAATGGAAGGGATTCTGCCATTTCCGGCGATGATAACGATGGAGTGCATCAACGTCGGCCTCAACACTCTCTTCAAATCCGCCACCGCCTCCGGCATGAGCCACCACGTCTTCGTCGTCTATTCTTACTCCCTCGCCGCCCTCATCCTCCTCCCTTCTCCCTTCATTTCTCGCAGATCGAGGCGGCTTCCACCGCTGAATTTCTCTGTGCTCTCGAAGATCGCTCTTCTCGGACTGATCGGTTCTTCTTCGCAGATTATGGGATACACGGGAATCAGTTACAGTTCTCCCACTCTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTCGCCATCATTTTCAGGATGGAGAAAGTGGTATTGAAAAGCAATAGCAGTCAAGCAAAAGTGATGGGCACCATAATATCAATATCAGGTGCATTTGTAGTCACTCTTTACAAGGGTCCAAGGATCATATTCTCTTCAGCACCCACATCTCTTTCACTTCATCACCCACTAACCTCTTCGGATTCTAATTGGGTCATTGGCAGCCTTCTCTTGACTGCTGAATATATCTTGGTTCCACTTTGGTACATTGTTCAGACAAAAATAATGAAGGAATACCCAGAAGAGGCAACAGTGATCTTCTTCTACAACTTAACTGTGGCCTTCATAGCTGCAGTTGTAGGAGTGATTTTAGAGAAAGATCCAAGTGCTTGGATTTTGAGTCAAAATACAGCATTGGCCTCTGTTTTATGCTCTGGACTTTTTGGATCATGCTTGAATAATACAGTTCATACATGGGCACTCCGCTTGAAAGGGCCAGTGTTCGTAGCGATGTTTAAGCCACTGTCAATTGTTGTCGCTATTGTAATGGGTGTTCTGTTTCTTGGTGATTCTCTATACCTTGGAAGTCTTATTGGAGCATCCATAATATCCATAGGGTTTTATACTGTAATGTGGGGAAAAGCCAAAGAAGAAATGGGTGATGAAGAAGAAAAAGAAGAAGGCCATAGCCATAATCTTACTGGTAACAAGGAATCACATGAAGATCAGAGAGTACCTCTTCTTGGAAGGTACAACACACAGAGATACAGTTCAGACCATGTATGA | 1119 | 44.41 | MAGRYLMEGILPFPAMITMECINVGLNTLFKSATASGMSHHVFVVYSYSLAALILLPSPFISRRSRRLPPLNFSVLSKIALLGLIGSSSQIMGYTGISYSSPTLASAISNLVPAFTFILAIIFRMEKVVLKSNSSQAKVMGTIISISGAFVVTLYKGPRIIFSSAPTSLSLHHPLTSSDSNWVIGSLLLTAEYILVPLWYIVQTKIMKEYPEEATVIFFYNLTVAFIAAVVGVILEKDPSAWILSQNTALASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLYLGSLIGASIISIGFYTVMWGKAKEEMGDEEEKEEGHSHNLTGNKESHEDQRVPLLGRYNTQRYSSDHV | 372 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 43701185 | 43705901 | + | Lag0029996.1 | Lac8g2609 | 618443 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac8g2609 | 372 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 50 | 156 | - | - | |
Lac8g2609 | 372 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 222 | 326 | - | - | |
Lac8g2609 | 372 | MobiDBLite | consensus disorder prediction | 330 | 356 | - | - | |
Lac8g2609 | 372 | Pfam | EamA-like transporter family | 198 | 322 | IPR000620 | GO:0016020(InterPro) | |
Lac8g2609 | 372 | Pfam | EamA-like transporter family | 24 | 153 | IPR000620 | GO:0016020(InterPro) | |
Lac8g2609 | 372 | PANTHER | WAT1-RELATED PROTEIN | 15 | 337 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac8g0356 | Lac-Chr8:4362998 | Lac8g2609 | Lac-Chr8:43701185 | 8.20E-21 | dispersed | |
Lac8g0357 | Lac-Chr8:4368372 | Lac8g2609 | Lac-Chr8:43701185 | 8.00E-49 | dispersed | |
Lac8g0362 | Lac-Chr8:4420438 | Lac8g2609 | Lac-Chr8:43701185 | 5.30E-28 | dispersed | |
Lac8g0363 | Lac-Chr8:4425847 | Lac8g2609 | Lac-Chr8:43701185 | 4.30E-49 | dispersed | |
Lac8g0377 | Lac-Chr8:4691234 | Lac8g2609 | Lac-Chr8:43701185 | 7.50E-35 | dispersed | |
Lac8g2485 | Lac-Chr8:42772346 | Lac8g2609 | Lac-Chr8:43701185 | 1.00E-42 | dispersed | |
Lac8g2486 | Lac-Chr8:42795169 | Lac8g2609 | Lac-Chr8:43701185 | 1.00E-42 | dispersed | |
Lac8g2609 | Lac-Chr8:43701185 | Lac9g0310 | Lac-Chr9:4958882 | 1.60E-43 | dispersed | |
Lac8g2608 | Lac-Chr8:43692276 | Lac8g2609 | Lac-Chr8:43701185 | 9.20E-73 | tandem |
Pathway information
