Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2609 ATGGCGGGAAGATACTTAATGGAAGGGATTCTGCCATTTCCGGCGATGATAACGATGGAGTGCATCAACGTCGGCCTCAACACTCTCTTCAAATCCGCCACCGCCTCCGGCATGAGCCACCACGTCTTCGTCGTCTATTCTTACTCCCTCGCCGCCCTCATCCTCCTCCCTTCTCCCTTCATTTCTCGCAGATCGAGGCGGCTTCCACCGCTGAATTTCTCTGTGCTCTCGAAGATCGCTCTTCTCGGACTGATCGGTTCTTCTTCGCAGATTATGGGATACACGGGAATCAGTTACAGTTCTCCCACTCTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTCGCCATCATTTTCAGGATGGAGAAAGTGGTATTGAAAAGCAATAGCAGTCAAGCAAAAGTGATGGGCACCATAATATCAATATCAGGTGCATTTGTAGTCACTCTTTACAAGGGTCCAAGGATCATATTCTCTTCAGCACCCACATCTCTTTCACTTCATCACCCACTAACCTCTTCGGATTCTAATTGGGTCATTGGCAGCCTTCTCTTGACTGCTGAATATATCTTGGTTCCACTTTGGTACATTGTTCAGACAAAAATAATGAAGGAATACCCAGAAGAGGCAACAGTGATCTTCTTCTACAACTTAACTGTGGCCTTCATAGCTGCAGTTGTAGGAGTGATTTTAGAGAAAGATCCAAGTGCTTGGATTTTGAGTCAAAATACAGCATTGGCCTCTGTTTTATGCTCTGGACTTTTTGGATCATGCTTGAATAATACAGTTCATACATGGGCACTCCGCTTGAAAGGGCCAGTGTTCGTAGCGATGTTTAAGCCACTGTCAATTGTTGTCGCTATTGTAATGGGTGTTCTGTTTCTTGGTGATTCTCTATACCTTGGAAGTCTTATTGGAGCATCCATAATATCCATAGGGTTTTATACTGTAATGTGGGGAAAAGCCAAAGAAGAAATGGGTGATGAAGAAGAAAAAGAAGAAGGCCATAGCCATAATCTTACTGGTAACAAGGAATCACATGAAGATCAGAGAGTACCTCTTCTTGGAAGGTACAACACACAGAGATACAGTTCAGACCATGTATGA 1119 44.41 MAGRYLMEGILPFPAMITMECINVGLNTLFKSATASGMSHHVFVVYSYSLAALILLPSPFISRRSRRLPPLNFSVLSKIALLGLIGSSSQIMGYTGISYSSPTLASAISNLVPAFTFILAIIFRMEKVVLKSNSSQAKVMGTIISISGAFVVTLYKGPRIIFSSAPTSLSLHHPLTSSDSNWVIGSLLLTAEYILVPLWYIVQTKIMKEYPEEATVIFFYNLTVAFIAAVVGVILEKDPSAWILSQNTALASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLYLGSLIGASIISIGFYTVMWGKAKEEMGDEEEKEEGHSHNLTGNKESHEDQRVPLLGRYNTQRYSSDHV 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43701185 43705901 + Lag0029996.1 Lac8g2609 618443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2609 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 156 - -
Lac8g2609 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 326 - -
Lac8g2609 372 MobiDBLite consensus disorder prediction 330 356 - -
Lac8g2609 372 Pfam EamA-like transporter family 198 322 IPR000620 GO:0016020(InterPro)
Lac8g2609 372 Pfam EamA-like transporter family 24 153 IPR000620 GO:0016020(InterPro)
Lac8g2609 372 PANTHER WAT1-RELATED PROTEIN 15 337 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac8g0356 Lac-Chr8:4362998 Lac8g2609 Lac-Chr8:43701185 8.20E-21 dispersed
Lac8g0357 Lac-Chr8:4368372 Lac8g2609 Lac-Chr8:43701185 8.00E-49 dispersed
Lac8g0362 Lac-Chr8:4420438 Lac8g2609 Lac-Chr8:43701185 5.30E-28 dispersed
Lac8g0363 Lac-Chr8:4425847 Lac8g2609 Lac-Chr8:43701185 4.30E-49 dispersed
Lac8g0377 Lac-Chr8:4691234 Lac8g2609 Lac-Chr8:43701185 7.50E-35 dispersed
Lac8g2485 Lac-Chr8:42772346 Lac8g2609 Lac-Chr8:43701185 1.00E-42 dispersed
Lac8g2486 Lac-Chr8:42795169 Lac8g2609 Lac-Chr8:43701185 1.00E-42 dispersed
Lac8g2609 Lac-Chr8:43701185 Lac9g0310 Lac-Chr9:4958882 1.60E-43 dispersed
Lac8g2608 Lac-Chr8:43692276 Lac8g2609 Lac-Chr8:43701185 9.20E-73 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2609 - - - 0.0