Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2613 ATGGCTCCGAGCTCTGTTGTGGTCACAATTGAGAAGCATAACAGTTTCCCTTTAGTGGAAATCAATGCCTCTGATTCTCTGTTGCTTCCTGAGAAGCAGAAGGCCACCAGTCCCAAGCAGCTCACTTGGGTTCTTCTTCTCAAAGCCCACAGAGCTCTGTTTTTCTTCTCGTGGTTGGCTATGACTACGAAGGCTGTGTTTGCTTCTGTTAAGAAACGCATTGCTCATGCGGATATTAACGAAGAGGATTCCAAAAGCCGAGGGAAGTTGTATAGATTCATTAAAGCTTTTCTCGCTATTTCAATTGCGGGTTTGATCGTTGAAGTTGTTGCCCATTTCAAGAAGTGGAATCTGCAAATGATTCAGCCATTGGAGCTCGAGGTTCATGGGCTTGTCCAATGGTTTTATGTCTCGTGGCTTGCGTTTCGAGTTGATTACATTGCTCCACTGGTGTTAATGCTTTCTAAATTCTGCACTGTTCTGTTCCTGATCCAATCTCTCGATCGCCTTGTTCTCTGCGTTGGCTGCTTTTGGATCAAATACAAGAGAATCAAGCCCACGATTCAAGATGATGCTTATGATTTGGAAGATGCTTCAACTTTTCCGATGGTTCTTGTTCAAATCCCAATGTGCAATGAGAGAGAGGTTTATGCACAATCCATTGCTGCTGCTTGTCAGCTTGATTGGCCAAGGAATCGGATTTTGATTCAAGTTCTGGATGATTCAGACGATGGAAATCTTCAGCGTTTGATCAAAGAAGAAGTTCTGTCATGGAATGAAAAGGGTGTTAATATTGTTTACAGACATAGATTGATCCGAACTGGGTATAAAGCTGGGAATCTCAAGTCTGCTATGGCTTGTGATTATGTTAAAGATTATGAGTTTGTAGCTATTTTAGATGCAGATTTCCAGCCCAACCCTGATTTCCTTAAACTAACGATCCCCCATTTCAAGGGAAATCCTCAACTGGGACTTGTCCAAGCTCGGTGGGCGTTTGTTAACAAGGACGAAAACTTACTTACAAGACTCCAAAACATCAACTTGTGCTTTCACTTTGAAGTGGAGCAGCAAGTTAATGGTGTTTTCCTGAACTTCTTTGGATTCAATGGAACAGCAGGCGTTTGGAGAACGGAAGCGCTTGAGGAATCCGGTGGCTGGCTCGAGCGGACGACCGTAGAAGATATGGACATCGCAGTTCGAGCTCACTTGAAGGGATGGAAATTCATCTTCCTCAATGATGTTAAGGTGCTGTGTGAATTGCCTGAATCATATGAAGCTTACAAGAAACAGCAACACCGTTGGCATTCTGGTCCAATGCAGCTCTTCAGATTATGCCTGCCTTCGATCATTACTTCAAAGATATCAATATGGAAGAAGACCAACTTGATATTCCTGTTCTTTCTCCTGAGAAAACTCATCCTTCCCTTTTACTCATTCACTTTGTTTTGCATCATACTTCCATTGACAATGTTCATTCCAGAAGCAGAATTGCCTCTCTGGGTGATCTGCTACATCCCAGTCTTCATGTCATTGCTAAACATTCTTCCATCCCCCAAATCCTTCCCCTTCTTGATCCCATACCTCTTGTTTGAGAACACCATGTCTGTCACAAAGTTCAACGCCATGGTTTCGGGGCTATTCCAGCTCGGAAGCTCATACGAATGGATCGTGACAAAGAAGACAGGACGATCGTCTGAATCCGACTTCTTAGCATTCGCCGAGCGAGAGTCGAAAACGACGAACGAGGAGAAGATTCTGAGGAGACATTCGGAGTCGGGGCTGGAGTTGTTGAGCAAATTGAACCAACAAGAGAAGCAGCAAAAGGGTTCAAACTCAAAGAAGAAGAGAAACAAGGTGTATAGAAAAGAGCTAGCTCTTGCTTTTCTGCTGCTAACTGCATCAGCTAGAAGCTTGCTGTCAGCACATGGAGTTCACTTCTATTTCTTGCTCTTCCAAGGTTTGTCATTCCTGGTTGTGGGTTTGGACTTGATTGGTGAGCAAATGAACTGA 2010 43.73 MAPSSVVVTIEKHNSFPLVEINASDSLLLPEKQKATSPKQLTWVLLLKAHRALFFFSWLAMTTKAVFASVKKRIAHADINEEDSKSRGKLYRFIKAFLAISIAGLIVEVVAHFKKWNLQMIQPLELEVHGLVQWFYVSWLAFRVDYIAPLVLMLSKFCTVLFLIQSLDRLVLCVGCFWIKYKRIKPTIQDDAYDLEDASTFPMVLVQIPMCNEREVYAQSIAAACQLDWPRNRILIQVLDDSDDGNLQRLIKEEVLSWNEKGVNIVYRHRLIRTGYKAGNLKSAMACDYVKDYEFVAILDADFQPNPDFLKLTIPHFKGNPQLGLVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRTEALEESGGWLERTTVEDMDIAVRAHLKGWKFIFLNDVKVLCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIITSKISIWKKTNLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWVICYIPVFMSLLNILPSPKSFPFLIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKTGRSSESDFLAFAERESKTTNEEKILRRHSESGLELLSKLNQQEKQQKGSNSKKKRNKVYRKELALAFLLLTASARSLLSAHGVHFYFLLFQGLSFLVVGLDLIGEQMN 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43718309 43720603 - Lag0030000.1 Lac8g2613 618447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2613 669 SUPERFAMILY Nucleotide-diphospho-sugar transferases 204 504 IPR029044 -
Lac8g2613 669 Pfam Glycosyl transferase family group 2 296 502 IPR001173 -
Lac8g2613 669 FunFam probable xyloglucan glycosyltransferase 5 196 420 - -
Lac8g2613 669 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 194 421 IPR029044 -
Lac8g2613 669 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 118 668 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0693 Lac-Chr2:5210373 Lac8g2613 Lac-Chr8:43718309 4.40E-273 dispersed
Lac6g0224 Lac-Chr6:1786030 Lac8g2613 Lac-Chr8:43718309 3.20E-239 dispersed
Lac8g2613 Lac-Chr8:43718309 Lac9g2668 Lac-Chr9:45034125 2.70E-110 dispersed
Lac8g2613 Lac-Chr8:43718309 Lac2g0428 Lac-Chr2:3122723 7.10E-244 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2613 K20887 - csv:101208151 1234.94