Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2615 ATGGCTGAAGATGGACAGGAGATGAGATCTCTGGCATTGACGCCCACTTGGTCTGTTGCTTCTGTGCTGACTATTTTTGTTGCTGTCTCTTTGCTTGTCGAGCGGTCCATTCACCGGCTAAGCACTTGGTTGGGGAAAACTAACAGAAAGCCATTATTTGAGGCAGTGGAGAAAATGAAAGAAGAGTTGATGCTGCTTGGATTTATTTCTCTCCTATTAACGGCTACATCAAGCTCAATAGCAAATATCTGCATCCCATCAAAGTTCTACAATACCCCTTTTACTCCATGCACCAAATCTGAGATTGATGAACAAAAAGAAGACAGTTCATCTGAGGAACGGAAACTATATACAGTTTCTGTATTACCCCATTTATTTAGGCGGATGCTTAATGTGAATAAGAAAACCTGCAGAGAGGGTTATGAGCCGTTTGTTTCATATGAGGGTCTTGAGCAATTGCATCGCTTTATCTTTATAATGGCAGTAACTCACATATCTTATAGCTGCTTAACAATGTTACTGGCAATTGTGAAGATTCACAGATGGAGAGTCTGGGAAGATGAAGCCCACATGGACAGACATGATTCACTAAATGTGATGAGCTACATCCAGAAGGATTTGATGATGAAATCAATGGAAGAATTGGATAATGATGAAAGTGAACTTTTTCAATTTTTCTGTACAATGACATGTTTCTTCCGGCAATTTGGGAATTCTGTAGTTCGTGCGGATTATCTCACACTCCGTAAGGGCTTCATCATGAATCACCACCTCCCTTTGACATATGATTTCCACAGCTACATGATTCGCTCCATGGAAGAAGAATTCCAAAGGATAGTTGGTGTGAGTGGCCCACTGTGGGGATTCGTTGTTGCTTTCATGCTGTTTAATGTAAAAGGCTCTAATCTGTATTTCTGGATAGCAAGCATTCCGATTACTCTTGTTCTTTTTGTGGGCACGAAGCTGCAGCATGTCATTGCAACATTGGCATTAGAAAGTGCTGGTATAACTGGTTCTTTTTCGGGTTCGAAGCTAAAGCCAAGAGATGATCTTTTTTGGTTTAAGAAGCCTGAATTCCTCTTGTCCTTGATCCACTTTATCCTTTTCCAGAATGCATTCGAGTTGGCATCGTTCTTCTGGTTCTGGTGGCAATTCGGATATAATTCTTGCTTTATTAGGAATCATATGCTTGTCTATGCAAGACTCATATTGGGATTTGCCGGGCAGTTCCTTTGCAGCTACAGCACCTTGCCCTTGTATGCTTTGGTAACTCAGATGGGAACAAACTATAAAGCTGCATTAATTCCACAAAGAATAAGGGAAACAATTCATGGATGGGGCAAGGCAGCAAGAAGGAAAAGAAGGCTTCGTATGTTCACCGATGACACCACGATTCACACCGAAACAAGCACAGTGGTGTCACTTGAGGATGATGACCATCGGCTTATTGATGATACTCCTGAAATTACTGCTGACTATACGGCAATCGAGCTCCAGCCAACTGTACAAGACGAATCTGACTCTGTCGCTAATGAACGGCCAAGCAGGGCCAGAACGCCTCTTCTACAACCCTCTGCATCTCTTTCTTCACCAGTTGATCATAAGTTTGAGGTGGAAAGATTTATGAGAAGCTCTTCTATGCCAGTCAAAAGATAG 1656 42.03 MAEDGQEMRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSTWLGKTNRKPLFEAVEKMKEELMLLGFISLLLTATSSSIANICIPSKFYNTPFTPCTKSEIDEQKEDSSSEERKLYTVSVLPHLFRRMLNVNKKTCREGYEPFVSYEGLEQLHRFIFIMAVTHISYSCLTMLLAIVKIHRWRVWEDEAHMDRHDSLNVMSYIQKDLMMKSMEELDNDESELFQFFCTMTCFFRQFGNSVVRADYLTLRKGFIMNHHLPLTYDFHSYMIRSMEEEFQRIVGVSGPLWGFVVAFMLFNVKGSNLYFWIASIPITLVLFVGTKLQHVIATLALESAGITGSFSGSKLKPRDDLFWFKKPEFLLSLIHFILFQNAFELASFFWFWWQFGYNSCFIRNHMLVYARLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKAARRKRRLRMFTDDTTIHTETSTVVSLEDDDHRLIDDTPEITADYTAIELQPTVQDESDSVANERPSRARTPLLQPSASLSSPVDHKFEVERFMRSSSMPVKR 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43734253 43740830 - Lag0030002.1 Lac8g2615 618449

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2615 551 PANTHER MLO-LIKE PROTEIN 1 1 487 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lac8g2615 551 Pfam Mlo family 9 467 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lac8g2615 551 MobiDBLite consensus disorder prediction 502 530 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2615 K08472 - - csv:101217434 951.429
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1279 Lac-Chr2:10556534 Lac8g2615 Lac-Chr8:43734253 1.10E-237 dispersed
Lac5g2487 Lac-Chr5:43410405 Lac8g2615 Lac-Chr8:43734253 1.70E-113 dispersed
Lac8g2615 Lac-Chr8:43734253 Lac9g2008 Lac-Chr9:39705647 7.00E-64 dispersed
Lac8g2615 Lac-Chr8:43734253 Lac9g2570 Lac-Chr9:44311303 2.60E-87 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lac2g1279 . 3 554 MLO family AT5G53760 68.6 8.8e-211 730.7
Lac8g2615 . 9 551 MLO family AT5G53760 68.0 6.5e-206 714.5
Lac7g2551 . 10 473 MLO family AT3G45290 55.4 1.2e-139 494.2
Lac2g1279 . 3 554 MLO family AT1G26700 67.9 4.1e-213 738.4
Lac8g2615 . 9 551 MLO family AT1G26700 66.9 4.4e-199 691.8
Lac7g2556 . 8 536 MLO family AT2G39200 63.3 4.1e-192 668.7
Lac9g2570 . 8 504 MLO family AT2G39200 67.6 1.7e-190 663.3
Lac13g0722 . 4 497 MLO family AT2G39200 67.1 1.7e-190 663.3
Lac9g2570 . 8 415 MLO family AT1G61560 67.6 3.9e-160 562.0
Lac7g2556 . 8 416 MLO family AT1G61560 67.7 5.7e-159 558.1
Lac13g0722 . 4 406 MLO family AT1G61560 66.7 6.5e-155 544.7
Lac1g3099 . 28 424 MLO family AT1G61560 52.2 1.3e-115 414.1
Lac6g0081 . 10 413 MLO family AT1G61560 50.2 4.9e-110 395.6
Lac1g3099 . 10 498 MLO family AT2G17430 61.3 1.2e-169 594.0
Lac5g0037 . 32 492 MLO family AT2G17430 62.8 1.8e-157 553.5
Lac6g0081 . 2 477 MLO family AT2G17430 59.3 4.2e-154 542.3
Lac1g3099 . 28 586 MLO family AT2G17480 62.4 8.6e-193 671.0
Lac5g0037 . 7 579 MLO family AT2G17480 60.3 6.8e-182 634.8
Lac6g0081 . 12 462 MLO family AT2G17480 61.2 1.3e-156 550.8
Lac7g2556 . 8 463 MLO family AT2G17480 52.2 4.5e-125 446.0
Lac9g2570 . 8 462 MLO family AT2G17480 51.0 1.3e-124 444.5
Lac13g0722 . 4 453 MLO family AT2G17480 50.3 1.8e-118 424.1
Lac6g0081 . 12 378 MLO family AT1G42560 61.7 1.6e-128 456.8
Lac1g3099 . 28 388 MLO family AT1G42560 59.3 9.6e-121 431.0
Lac5g0037 . 32 391 MLO family AT1G42560 55.0 9.0e-111 397.9
Lac7g2556 . 8 381 MLO family AT1G42560 50.4 8.2e-96 348.2
Lac9g0132 . 9 178 MLO family AT4G24250 55.3 5.9e-44 176.0
Lac1g3099 . 8 389 MLO family AT5G65970 65.2 1.9e-142 503.4
Lac5g0037 . 30 391 MLO family AT5G65970 65.7 4.1e-137 485.7
Lac6g0081 . 9 378 MLO family AT5G65970 60.4 3.8e-122 436.0
Lac9g2570 . 2 380 MLO family AT5G65970 51.8 6.4e-106 382.1
Lac6g0081 . 2 535 MLO family AT2G33670 61.7 3.3e-177 619.0
Lac1g3099 . 28 510 MLO family AT2G33670 58.2 7.3e-153 538.1
Lac5g0037 . 32 474 MLO family AT2G33670 57.8 6.0e-139 491.9
Lac7g2556 . 8 482 MLO family AT2G33670 50.7 1.4e-127 454.1
Lac13g0722 . 62 520 MLO family AT1G11310 64.7 9.7e-169 590.9
Lac7g2556 . 63 506 MLO family AT1G11310 65.1 1.0e-165 580.9
Lac9g2570 . 63 519 MLO family AT1G11310 63.8 5.0e-165 578.6
Lac12g1923 . 1 488 MLO family AT2G44110 53.1 1.2e-139 494.2
Lac12g1923 . 1 495 MLO family AT4G02600 64.6 1.9e-183 639.8
Lac9g0132 . 8 178 MLO family AT4G02600 50.3 1.8e-37 154.8
Lac5g2487 . 3 561 MLO family AT1G11000 67.8 1.8e-216 749.6
Lac5g0104 . 4 459 MLO family AT1G11000 52.9 1.2e-130 464.5
Lac12g1923 . 1 495 MLO family AT4G02600 64.6 1.9e-183 639.8
Lac9g0132 . 8 178 MLO family AT4G02600 50.3 1.8e-37 154.8
Lac13g0722 . 62 520 MLO family AT1G11310 64.7 9.7e-169 590.9
Lac7g2556 . 63 506 MLO family AT1G11310 65.1 1.0e-165 580.9
Lac9g2570 . 63 519 MLO family AT1G11310 63.8 5.0e-165 578.6
Lac7g2551 . 10 473 MLO family AT3G45290 55.4 1.2e-139 494.2
Lac5g2487 . 3 561 MLO family AT1G11000 67.8 1.8e-216 749.6
Lac5g0104 . 4 459 MLO family AT1G11000 52.9 1.2e-130 464.5
Lac6g0081 . 2 535 MLO family AT2G33670 61.7 3.3e-177 619.0
Lac1g3099 . 28 510 MLO family AT2G33670 58.2 7.3e-153 538.1
Lac5g0037 . 32 474 MLO family AT2G33670 57.8 6.0e-139 491.9
Lac7g2556 . 8 482 MLO family AT2G33670 50.7 1.4e-127 454.1
Lac9g2570 . 8 415 MLO family AT1G61560 67.6 3.9e-160 562.0
Lac7g2556 . 8 416 MLO family AT1G61560 67.7 5.7e-159 558.1
Lac13g0722 . 4 406 MLO family AT1G61560 66.7 6.5e-155 544.7
Lac1g3099 . 28 424 MLO family AT1G61560 52.2 1.3e-115 414.1
Lac6g0081 . 10 413 MLO family AT1G61560 50.2 4.9e-110 395.6
Lac1g3099 . 10 498 MLO family AT2G17430 61.3 1.2e-169 594.0
Lac5g0037 . 32 492 MLO family AT2G17430 62.8 1.8e-157 553.5
Lac6g0081 . 2 477 MLO family AT2G17430 59.3 4.2e-154 542.3
Lac1g3099 . 28 586 MLO family AT2G17480 62.4 8.6e-193 671.0
Lac5g0037 . 7 579 MLO family AT2G17480 60.3 6.8e-182 634.8
Lac6g0081 . 12 462 MLO family AT2G17480 61.2 1.3e-156 550.8
Lac7g2556 . 8 463 MLO family AT2G17480 52.2 4.5e-125 446.0
Lac9g2570 . 8 462 MLO family AT2G17480 51.0 1.3e-124 444.5
Lac13g0722 . 4 453 MLO family AT2G17480 50.3 1.8e-118 424.1
Lac6g0081 . 12 378 MLO family AT1G42560 61.7 1.6e-128 456.8
Lac1g3099 . 28 388 MLO family AT1G42560 59.3 9.6e-121 431.0
Lac5g0037 . 32 391 MLO family AT1G42560 55.0 9.0e-111 397.9
Lac7g2556 . 8 381 MLO family AT1G42560 50.4 8.2e-96 348.2
Lac1g3099 . 8 389 MLO family AT5G65970 65.2 1.9e-142 503.4
Lac5g0037 . 30 391 MLO family AT5G65970 65.7 4.1e-137 485.7
Lac6g0081 . 9 378 MLO family AT5G65970 60.4 3.8e-122 436.0
Lac9g2570 . 2 380 MLO family AT5G65970 51.8 6.4e-106 382.1
Lac2g1279 . 3 554 MLO family AT5G53760 68.6 8.8e-211 730.7
Lac8g2615 . 9 551 MLO family AT5G53760 68.0 6.5e-206 714.5
Lac7g2556 . 8 536 MLO family AT2G39200 63.3 4.1e-192 668.7
Lac9g2570 . 8 504 MLO family AT2G39200 67.6 1.7e-190 663.3
Lac13g0722 . 4 497 MLO family AT2G39200 67.1 1.7e-190 663.3
Lac9g0132 . 9 178 MLO family AT4G24250 55.3 5.9e-44 176.0
Lac2g1279 . 3 554 MLO family AT1G26700 67.9 4.1e-213 738.4
Lac8g2615 . 9 551 MLO family AT1G26700 66.9 4.4e-199 691.8
Lac12g1923 . 1 488 MLO family AT2G44110 53.1 1.2e-139 494.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001851 1 6 2 2 2 1 3 2 1 2 2 2 3 2 2 3 1 2 2 2 2 2 2 2 2 2 2 3 4 1 65