Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2615 ATGGCTGAAGATGGACAGGAGATGAGATCTCTGGCATTGACGCCCACTTGGTCTGTTGCTTCTGTGCTGACTATTTTTGTTGCTGTCTCTTTGCTTGTCGAGCGGTCCATTCACCGGCTAAGCACTTGGTTGGGGAAAACTAACAGAAAGCCATTATTTGAGGCAGTGGAGAAAATGAAAGAAGAGTTGATGCTGCTTGGATTTATTTCTCTCCTATTAACGGCTACATCAAGCTCAATAGCAAATATCTGCATCCCATCAAAGTTCTACAATACCCCTTTTACTCCATGCACCAAATCTGAGATTGATGAACAAAAAGAAGACAGTTCATCTGAGGAACGGAAACTATATACAGTTTCTGTATTACCCCATTTATTTAGGCGGATGCTTAATGTGAATAAGAAAACCTGCAGAGAGGGTTATGAGCCGTTTGTTTCATATGAGGGTCTTGAGCAATTGCATCGCTTTATCTTTATAATGGCAGTAACTCACATATCTTATAGCTGCTTAACAATGTTACTGGCAATTGTGAAGATTCACAGATGGAGAGTCTGGGAAGATGAAGCCCACATGGACAGACATGATTCACTAAATGTGATGAGCTACATCCAGAAGGATTTGATGATGAAATCAATGGAAGAATTGGATAATGATGAAAGTGAACTTTTTCAATTTTTCTGTACAATGACATGTTTCTTCCGGCAATTTGGGAATTCTGTAGTTCGTGCGGATTATCTCACACTCCGTAAGGGCTTCATCATGAATCACCACCTCCCTTTGACATATGATTTCCACAGCTACATGATTCGCTCCATGGAAGAAGAATTCCAAAGGATAGTTGGTGTGAGTGGCCCACTGTGGGGATTCGTTGTTGCTTTCATGCTGTTTAATGTAAAAGGCTCTAATCTGTATTTCTGGATAGCAAGCATTCCGATTACTCTTGTTCTTTTTGTGGGCACGAAGCTGCAGCATGTCATTGCAACATTGGCATTAGAAAGTGCTGGTATAACTGGTTCTTTTTCGGGTTCGAAGCTAAAGCCAAGAGATGATCTTTTTTGGTTTAAGAAGCCTGAATTCCTCTTGTCCTTGATCCACTTTATCCTTTTCCAGAATGCATTCGAGTTGGCATCGTTCTTCTGGTTCTGGTGGCAATTCGGATATAATTCTTGCTTTATTAGGAATCATATGCTTGTCTATGCAAGACTCATATTGGGATTTGCCGGGCAGTTCCTTTGCAGCTACAGCACCTTGCCCTTGTATGCTTTGGTAACTCAGATGGGAACAAACTATAAAGCTGCATTAATTCCACAAAGAATAAGGGAAACAATTCATGGATGGGGCAAGGCAGCAAGAAGGAAAAGAAGGCTTCGTATGTTCACCGATGACACCACGATTCACACCGAAACAAGCACAGTGGTGTCACTTGAGGATGATGACCATCGGCTTATTGATGATACTCCTGAAATTACTGCTGACTATACGGCAATCGAGCTCCAGCCAACTGTACAAGACGAATCTGACTCTGTCGCTAATGAACGGCCAAGCAGGGCCAGAACGCCTCTTCTACAACCCTCTGCATCTCTTTCTTCACCAGTTGATCATAAGTTTGAGGTGGAAAGATTTATGAGAAGCTCTTCTATGCCAGTCAAAAGATAG 1656 42.03 MAEDGQEMRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSTWLGKTNRKPLFEAVEKMKEELMLLGFISLLLTATSSSIANICIPSKFYNTPFTPCTKSEIDEQKEDSSSEERKLYTVSVLPHLFRRMLNVNKKTCREGYEPFVSYEGLEQLHRFIFIMAVTHISYSCLTMLLAIVKIHRWRVWEDEAHMDRHDSLNVMSYIQKDLMMKSMEELDNDESELFQFFCTMTCFFRQFGNSVVRADYLTLRKGFIMNHHLPLTYDFHSYMIRSMEEEFQRIVGVSGPLWGFVVAFMLFNVKGSNLYFWIASIPITLVLFVGTKLQHVIATLALESAGITGSFSGSKLKPRDDLFWFKKPEFLLSLIHFILFQNAFELASFFWFWWQFGYNSCFIRNHMLVYARLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKAARRKRRLRMFTDDTTIHTETSTVVSLEDDDHRLIDDTPEITADYTAIELQPTVQDESDSVANERPSRARTPLLQPSASLSSPVDHKFEVERFMRSSSMPVKR 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43734253 43740830 - Lag0030002.1 Lac8g2615 618449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2615 551 PANTHER MLO-LIKE PROTEIN 1 1 487 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lac8g2615 551 Pfam Mlo family 9 467 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lac8g2615 551 MobiDBLite consensus disorder prediction 502 530 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1279 Lac-Chr2:10556534 Lac8g2615 Lac-Chr8:43734253 1.10E-237 dispersed
Lac5g2487 Lac-Chr5:43410405 Lac8g2615 Lac-Chr8:43734253 1.70E-113 dispersed
Lac8g2615 Lac-Chr8:43734253 Lac9g2008 Lac-Chr9:39705647 7.00E-64 dispersed
Lac8g2615 Lac-Chr8:43734253 Lac9g2570 Lac-Chr9:44311303 2.60E-87 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2615 K08472 - csv:101217434 951.429