Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac8g2662 | ATGGTCAATTACAGGACTCTGAATAATGTTTCTCAAGAAAGTGGAATTTCGTGGAAACCAAATGTACCCGCAAGTGTTTTCACTTCATCTTCTTCAGTTTTTTCCTTGCTGAAGCTTGAAGATGGGGACAAGGATGATGTTTTGGAGGCTGTTGTGAAGGAAGCTGTTGATTTGGAGAACGTGCCTCTTGAAGAGGTTTTTCAGACTTTGAGGTGTAATACTAATGGTTTGACAACAGAGGCGGCTCGTGAGAGGTTGGCCATTTTTGGCTATAACAAGCTTGAAGAAAAAAAGGAGAGTAAGGTTTTGAAGTTCTTGGGATTTATGTGGAACCCTCTCTCATGGGTCATGGAAGCTGCAGCTATAATGGCTATTGCTCTAGCTAATGGAGGAGGAAAACCTCCAGATTGGCAAGATTTTGTTGGGATCATAACCTTGTTACTTATCAATTCAACTATTAGTTTTATAGAGGAGAACAATGCTGGAAATGCTGCAGCTGCTCTAATGGCTCGTCTTGCACCGAAAGCTAAGGTTCTTAGAGATGGGAAATGGGTTGAGGAGGAAGCATCAGTTCTTGTTCCTGGTGATATAATTAGTGTCAAGCTCGGTGACATTATTCCTGCTGATTCTCGCCTCCTTGAAGGTGATCCCCTGAAGATTGATCAATCTGCTCTCACTGGTGAATCACTTCCTGTGACTAAAGGCCCCGGCGACAGTGTCTATTCAGGGTCAACATGCAAACAGGGAGAAATTGAAGCAGTTGTTATTGCTACTGGTGTTCATACCTTCTTTGGCAAAGCTGCTCATCTTGTGGACTCCACAAACCAAGTGGGTCACTTCCAAAAGGTCTTGACTGCTATTGGAAATTTCTGCATATGTTCCATTGCTGTGGGCATGATCGTGGAGATTATTGTCATGTACCCAATCCAACATCGAGCTTACCGTCCAGGGATCGACAATCTCCTAGTTCTTCTCATCGGAGGAATTCCTATTGCAATGCCAACTGTTTTGTCAGTCACGATGGCAATTGGATCACATCGTCTATCTCAACAGGGAGCTATCACTAAACGAATGACTGCAATAGAAGAAATGGCTGGAATGGACGTGCTTTGTAGCGACAAAACAGGAACGCTGACCTTAAATAAGCTTACTGTTGACAAGACTCTGATAGAGGTTTTCGCCAAGAGAGTGGATGTAGATACCGTCGTTCTCATGGCAGCTCAAGCCTCCCGAACTGAAAACCAAGATGCAATAGATGCTGCTATAGTAGGGATGTTAAGTGATCCAAAGGAGGCACGAGCAGGAATTCAAGAGGTTCACTTCCTTCCATTCAACCCAACTGACAAGCGGACTGCCCTGACATACATTGATGGTGATGGTAAAATGCATCGGGTCAGCAAAGGTGCTCCAGAACAGATTTTGAATCTTGCACACAACAAATCAGAGATAGAAAGAAGAGTTCATGCTGTAATCGATAAGTTCGCAGAGCGAGGATTGCGATCTCTTGCAGTGGCATACCAAGAAGTTCCAGAAGGAAGGAAGGAGAGTCATGGAGGGCCATGGCAATTCATCGGCCTATTGCCACTGTTTGACCCACCTAGACATGATAGTGCAGAGACAATTAGGAGGGCTTTGAATCTTGGTGTAAATGTCAAAATGATCACAGGTGATCAACTGGCTATAGGAAAGGAGACAGGACGTCGGCTCGGGATGGGAACAAATATGTACCCTTCATCTGCATTATTAGGACAGAACAAAGATGAATCAATATCTGGACTGCCTGTTGATGACTTAATTGAGAAGGCTGATGGATTTGCTGGTGTATTTCCTGAGCACAAATATGAGATTGTGAAACGTTTACAAGCTCGAAAACATATATGTGGAATGACTGGAGATGGCGTTAATGATGCTCCTGCTCTAAAAAAGGCTGATATTGGCATAGCAGTTGCTGATGCAACTGATGCAGCTCGTAGCGCTTCTGACATTGTTCTTACAGAGCCTGGTCTTAGTGTTATTATAAGCGCTGTTCTAACCAGCAGGGCCATCTTCCAGAGGATGAAAAATTACACGATTTATGCAGTTTCAATTACCATTCGTATCGTGCTTGGATTCATGTTGCTGGCCCTTATATATCAATTTGACTTCCCACCTTTTATGGTTCTGATCATTGCTATCCTTAATGATGGTACCATAATGACAATATCAAAGGATAGAGTGAAACCATCTCCTCTGCCAGATAGCTGGAAACTGGCAGAGATTTTTGGCACTGGAATTATACTTGGAGGTTATTTGGCTATGATGACCGTTATTTTCTTCTGGGCAGCTTACAAAACTGACTTCTTTCCTCGTACATTTGGGGTTTCTAGCCTTCAGAAGAAGGATGAGGATGATTTCAGAAAGCTAGCTTCAGCAATATACCTGCAAGTGAGTACAATTAGTCAGGCCCTCATCTTTGTTACACGATCTCGGAGTTGGTCGTTTGTGGAGCGTCCTGGCCTGTTATTGGTTGCAGCTTTCATTATTGCTCAGCTGATTGCTACCGTCATTGCTGTCTATGCAAACTGGAGTTTTGCTGCAATAGAAGGGATTGGCTGGGGCTGGGCTGGTGTGGTTTGGCTATACAACCTCATCTTTTATTTCCCACTTGATCTAATTAAGTTTGCAATCAGATATGCCATTAGTGGTAGGGCATGGGATCTTGTCATTGAACAAAGGATTGCCTTCACAAGGAAGAAGGATTTTGGGAAGGAAGAGCGTGAGCTCAAATGGGCACATGCACAAAGGACACTTCATGGGCTGCAGCCACCTGAGGCTAAGATGTTTTCTGAGCGCACAACTTATACAGAACTCAATCAAATGGCTGAAGAAGCAAAACGACGAGCTGAAATTGCAAGGCTGAGAGAGCTCCACACACTGAAAGGTCATGTTGAATCAGTGGTGAGGCTGAAGGGTCTTGATATCAACACGATTCAGCAGTCATACACAGTATAG | 2991 | 43.8 | MVNYRTLNNVSQESGISWKPNVPASVFTSSSSVFSLLKLEDGDKDDVLEAVVKEAVDLENVPLEEVFQTLRCNTNGLTTEAARERLAIFGYNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWVEEEASVLVPGDIISVKLGDIIPADSRLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFAKRVDVDTVVLMAAQASRTENQDAIDAAIVGMLSDPKEARAGIQEVHFLPFNPTDKRTALTYIDGDGKMHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESHGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESISGLPVDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIYQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFGTGIILGGYLAMMTVIFFWAAYKTDFFPRTFGVSSLQKKDEDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGLLLVAAFIIAQLIATVIAVYANWSFAAIEGIGWGWAGVVWLYNLIFYFPLDLIKFAIRYAISGRAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLQPPEAKMFSERTTYTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDINTIQQSYTV | 996 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 44135151 | 44141611 | + | Lag0030049.1 | Lac8g2662 | 618496 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac8g2662 | 996 | SUPERFAMILY | Calcium ATPase, transduction domain A | 174 | 271 | IPR008250 | - | |
Lac8g2662 | 996 | Coils | Coil | 947 | 967 | - | - | |
Lac8g2662 | 996 | Pfam | E1-E2 ATPase | 172 | 350 | - | - | |
Lac8g2662 | 996 | FunFam | Plasma membrane ATPase | 174 | 258 | - | - | |
Lac8g2662 | 996 | FunFam | Plasma membrane ATPase | 524 | 678 | - | - | |
Lac8g2662 | 996 | PRINTS | H+-transporting ATPase (proton pump) signature | 661 | 686 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac8g2662 | 996 | PRINTS | H+-transporting ATPase (proton pump) signature | 806 | 827 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac8g2662 | 996 | PRINTS | H+-transporting ATPase (proton pump) signature | 602 | 618 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac8g2662 | 996 | PRINTS | H+-transporting ATPase (proton pump) signature | 487 | 505 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac8g2662 | 996 | PRINTS | H+-transporting ATPase (proton pump) signature | 630 | 646 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac8g2662 | 996 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 373 | 379 | IPR018303 | - | |
Lac8g2662 | 996 | Pfam | haloacid dehalogenase-like hydrolase | 367 | 644 | - | - | |
Lac8g2662 | 996 | NCBIfam | HAD-IC family P-type ATPase | 605 | 713 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac8g2662 | 996 | NCBIfam | HAD-IC family P-type ATPase | 143 | 392 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac8g2662 | 996 | Gene3D | - | 368 | 667 | IPR023214 | - | |
Lac8g2662 | 996 | CDD | P-type_ATPase_H | 76 | 887 | IPR006534 | GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro) | |
Lac8g2662 | 996 | PRINTS | P-type cation-transporting ATPase superfamily signature | 221 | 235 | - | - | |
Lac8g2662 | 996 | PRINTS | P-type cation-transporting ATPase superfamily signature | 525 | 536 | - | - | |
Lac8g2662 | 996 | PRINTS | P-type cation-transporting ATPase superfamily signature | 547 | 557 | - | - | |
Lac8g2662 | 996 | PRINTS | P-type cation-transporting ATPase superfamily signature | 653 | 665 | - | - | |
Lac8g2662 | 996 | PRINTS | P-type cation-transporting ATPase superfamily signature | 630 | 649 | - | - | |
Lac8g2662 | 996 | PRINTS | P-type cation-transporting ATPase superfamily signature | 371 | 385 | - | - | |
Lac8g2662 | 996 | SFLD | p-type atpase | 353 | 681 | IPR044492 | - | |
Lac8g2662 | 996 | SMART | Cation_ATPase_N_a_2 | 57 | 129 | IPR004014 | - | |
Lac8g2662 | 996 | FunFam | Plasma membrane ATPase | 383 | 530 | - | - | |
Lac8g2662 | 996 | Pfam | Cation transporter/ATPase, N-terminus | 60 | 123 | IPR004014 | - | |
Lac8g2662 | 996 | Gene3D | - | 136 | 861 | - | - | |
Lac8g2662 | 996 | Gene3D | - | 383 | 530 | IPR023299 | GO:0000166(InterPro) | |
Lac8g2662 | 996 | SFLD | C1.7: P-type atpase like | 353 | 681 | - | - | |
Lac8g2662 | 996 | SUPERFAMILY | HAD-like | 367 | 677 | IPR036412 | - | |
Lac8g2662 | 996 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 59 | 927 | - | GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER) | |
Lac8g2662 | 996 | FunFam | ATPase 4 plasma membrane-type | 615 | 861 | - | - | |
Lac8g2662 | 996 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 57 | 892 | IPR023298 | - | |
Lac8g2662 | 996 | Gene3D | - | 174 | 258 | - | - | |
Lac8g2662 | 996 | Gene3D | - | 945 | 996 | - | - | |
Lac8g2662 | 996 | NCBIfam | plasma-membrane proton-efflux P-type ATPase | 76 | 852 | IPR006534 | GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac6g2308 | Lac-Chr6:40409927 | Lac8g2662 | Lac-Chr8:44135151 | 0.00E+00 | dispersed | |
Lac8g2662 | Lac-Chr8:44135151 | Lac9g1422 | Lac-Chr9:32120529 | 1.20E-08 | dispersed | |
Lac10g0381 | Lac-Chr10:2961247 | Lac8g2662 | Lac-Chr8:44135151 | 0.00E+00 | wgd | |
Lac3g0642 | Lac-Chr3:4975235 | Lac8g2662 | Lac-Chr8:44135151 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac8g2662 | K01535 | - | csv:101211115 | 1767.67 |