Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2662 ATGGTCAATTACAGGACTCTGAATAATGTTTCTCAAGAAAGTGGAATTTCGTGGAAACCAAATGTACCCGCAAGTGTTTTCACTTCATCTTCTTCAGTTTTTTCCTTGCTGAAGCTTGAAGATGGGGACAAGGATGATGTTTTGGAGGCTGTTGTGAAGGAAGCTGTTGATTTGGAGAACGTGCCTCTTGAAGAGGTTTTTCAGACTTTGAGGTGTAATACTAATGGTTTGACAACAGAGGCGGCTCGTGAGAGGTTGGCCATTTTTGGCTATAACAAGCTTGAAGAAAAAAAGGAGAGTAAGGTTTTGAAGTTCTTGGGATTTATGTGGAACCCTCTCTCATGGGTCATGGAAGCTGCAGCTATAATGGCTATTGCTCTAGCTAATGGAGGAGGAAAACCTCCAGATTGGCAAGATTTTGTTGGGATCATAACCTTGTTACTTATCAATTCAACTATTAGTTTTATAGAGGAGAACAATGCTGGAAATGCTGCAGCTGCTCTAATGGCTCGTCTTGCACCGAAAGCTAAGGTTCTTAGAGATGGGAAATGGGTTGAGGAGGAAGCATCAGTTCTTGTTCCTGGTGATATAATTAGTGTCAAGCTCGGTGACATTATTCCTGCTGATTCTCGCCTCCTTGAAGGTGATCCCCTGAAGATTGATCAATCTGCTCTCACTGGTGAATCACTTCCTGTGACTAAAGGCCCCGGCGACAGTGTCTATTCAGGGTCAACATGCAAACAGGGAGAAATTGAAGCAGTTGTTATTGCTACTGGTGTTCATACCTTCTTTGGCAAAGCTGCTCATCTTGTGGACTCCACAAACCAAGTGGGTCACTTCCAAAAGGTCTTGACTGCTATTGGAAATTTCTGCATATGTTCCATTGCTGTGGGCATGATCGTGGAGATTATTGTCATGTACCCAATCCAACATCGAGCTTACCGTCCAGGGATCGACAATCTCCTAGTTCTTCTCATCGGAGGAATTCCTATTGCAATGCCAACTGTTTTGTCAGTCACGATGGCAATTGGATCACATCGTCTATCTCAACAGGGAGCTATCACTAAACGAATGACTGCAATAGAAGAAATGGCTGGAATGGACGTGCTTTGTAGCGACAAAACAGGAACGCTGACCTTAAATAAGCTTACTGTTGACAAGACTCTGATAGAGGTTTTCGCCAAGAGAGTGGATGTAGATACCGTCGTTCTCATGGCAGCTCAAGCCTCCCGAACTGAAAACCAAGATGCAATAGATGCTGCTATAGTAGGGATGTTAAGTGATCCAAAGGAGGCACGAGCAGGAATTCAAGAGGTTCACTTCCTTCCATTCAACCCAACTGACAAGCGGACTGCCCTGACATACATTGATGGTGATGGTAAAATGCATCGGGTCAGCAAAGGTGCTCCAGAACAGATTTTGAATCTTGCACACAACAAATCAGAGATAGAAAGAAGAGTTCATGCTGTAATCGATAAGTTCGCAGAGCGAGGATTGCGATCTCTTGCAGTGGCATACCAAGAAGTTCCAGAAGGAAGGAAGGAGAGTCATGGAGGGCCATGGCAATTCATCGGCCTATTGCCACTGTTTGACCCACCTAGACATGATAGTGCAGAGACAATTAGGAGGGCTTTGAATCTTGGTGTAAATGTCAAAATGATCACAGGTGATCAACTGGCTATAGGAAAGGAGACAGGACGTCGGCTCGGGATGGGAACAAATATGTACCCTTCATCTGCATTATTAGGACAGAACAAAGATGAATCAATATCTGGACTGCCTGTTGATGACTTAATTGAGAAGGCTGATGGATTTGCTGGTGTATTTCCTGAGCACAAATATGAGATTGTGAAACGTTTACAAGCTCGAAAACATATATGTGGAATGACTGGAGATGGCGTTAATGATGCTCCTGCTCTAAAAAAGGCTGATATTGGCATAGCAGTTGCTGATGCAACTGATGCAGCTCGTAGCGCTTCTGACATTGTTCTTACAGAGCCTGGTCTTAGTGTTATTATAAGCGCTGTTCTAACCAGCAGGGCCATCTTCCAGAGGATGAAAAATTACACGATTTATGCAGTTTCAATTACCATTCGTATCGTGCTTGGATTCATGTTGCTGGCCCTTATATATCAATTTGACTTCCCACCTTTTATGGTTCTGATCATTGCTATCCTTAATGATGGTACCATAATGACAATATCAAAGGATAGAGTGAAACCATCTCCTCTGCCAGATAGCTGGAAACTGGCAGAGATTTTTGGCACTGGAATTATACTTGGAGGTTATTTGGCTATGATGACCGTTATTTTCTTCTGGGCAGCTTACAAAACTGACTTCTTTCCTCGTACATTTGGGGTTTCTAGCCTTCAGAAGAAGGATGAGGATGATTTCAGAAAGCTAGCTTCAGCAATATACCTGCAAGTGAGTACAATTAGTCAGGCCCTCATCTTTGTTACACGATCTCGGAGTTGGTCGTTTGTGGAGCGTCCTGGCCTGTTATTGGTTGCAGCTTTCATTATTGCTCAGCTGATTGCTACCGTCATTGCTGTCTATGCAAACTGGAGTTTTGCTGCAATAGAAGGGATTGGCTGGGGCTGGGCTGGTGTGGTTTGGCTATACAACCTCATCTTTTATTTCCCACTTGATCTAATTAAGTTTGCAATCAGATATGCCATTAGTGGTAGGGCATGGGATCTTGTCATTGAACAAAGGATTGCCTTCACAAGGAAGAAGGATTTTGGGAAGGAAGAGCGTGAGCTCAAATGGGCACATGCACAAAGGACACTTCATGGGCTGCAGCCACCTGAGGCTAAGATGTTTTCTGAGCGCACAACTTATACAGAACTCAATCAAATGGCTGAAGAAGCAAAACGACGAGCTGAAATTGCAAGGCTGAGAGAGCTCCACACACTGAAAGGTCATGTTGAATCAGTGGTGAGGCTGAAGGGTCTTGATATCAACACGATTCAGCAGTCATACACAGTATAG 2991 43.8 MVNYRTLNNVSQESGISWKPNVPASVFTSSSSVFSLLKLEDGDKDDVLEAVVKEAVDLENVPLEEVFQTLRCNTNGLTTEAARERLAIFGYNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWVEEEASVLVPGDIISVKLGDIIPADSRLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFAKRVDVDTVVLMAAQASRTENQDAIDAAIVGMLSDPKEARAGIQEVHFLPFNPTDKRTALTYIDGDGKMHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESHGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESISGLPVDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIYQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFGTGIILGGYLAMMTVIFFWAAYKTDFFPRTFGVSSLQKKDEDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGLLLVAAFIIAQLIATVIAVYANWSFAAIEGIGWGWAGVVWLYNLIFYFPLDLIKFAIRYAISGRAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLQPPEAKMFSERTTYTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDINTIQQSYTV 996
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 44135151 44141611 + Lag0030049.1 Lac8g2662 618496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2662 996 SUPERFAMILY Calcium ATPase, transduction domain A 174 271 IPR008250 -
Lac8g2662 996 Coils Coil 947 967 - -
Lac8g2662 996 Pfam E1-E2 ATPase 172 350 - -
Lac8g2662 996 FunFam Plasma membrane ATPase 174 258 - -
Lac8g2662 996 FunFam Plasma membrane ATPase 524 678 - -
Lac8g2662 996 PRINTS H+-transporting ATPase (proton pump) signature 661 686 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Lac8g2662 996 PRINTS H+-transporting ATPase (proton pump) signature 806 827 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Lac8g2662 996 PRINTS H+-transporting ATPase (proton pump) signature 602 618 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Lac8g2662 996 PRINTS H+-transporting ATPase (proton pump) signature 487 505 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Lac8g2662 996 PRINTS H+-transporting ATPase (proton pump) signature 630 646 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Lac8g2662 996 ProSitePatterns E1-E2 ATPases phosphorylation site. 373 379 IPR018303 -
Lac8g2662 996 Pfam haloacid dehalogenase-like hydrolase 367 644 - -
Lac8g2662 996 NCBIfam HAD-IC family P-type ATPase 605 713 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Lac8g2662 996 NCBIfam HAD-IC family P-type ATPase 143 392 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Lac8g2662 996 Gene3D - 368 667 IPR023214 -
Lac8g2662 996 CDD P-type_ATPase_H 76 887 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Lac8g2662 996 PRINTS P-type cation-transporting ATPase superfamily signature 221 235 - -
Lac8g2662 996 PRINTS P-type cation-transporting ATPase superfamily signature 525 536 - -
Lac8g2662 996 PRINTS P-type cation-transporting ATPase superfamily signature 547 557 - -
Lac8g2662 996 PRINTS P-type cation-transporting ATPase superfamily signature 653 665 - -
Lac8g2662 996 PRINTS P-type cation-transporting ATPase superfamily signature 630 649 - -
Lac8g2662 996 PRINTS P-type cation-transporting ATPase superfamily signature 371 385 - -
Lac8g2662 996 SFLD p-type atpase 353 681 IPR044492 -
Lac8g2662 996 SMART Cation_ATPase_N_a_2 57 129 IPR004014 -
Lac8g2662 996 FunFam Plasma membrane ATPase 383 530 - -
Lac8g2662 996 Pfam Cation transporter/ATPase, N-terminus 60 123 IPR004014 -
Lac8g2662 996 Gene3D - 136 861 - -
Lac8g2662 996 Gene3D - 383 530 IPR023299 GO:0000166(InterPro)
Lac8g2662 996 SFLD C1.7: P-type atpase like 353 681 - -
Lac8g2662 996 SUPERFAMILY HAD-like 367 677 IPR036412 -
Lac8g2662 996 PANTHER CALCIUM-TRANSPORTING ATPASE 59 927 - GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER)
Lac8g2662 996 FunFam ATPase 4 plasma membrane-type 615 861 - -
Lac8g2662 996 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 892 IPR023298 -
Lac8g2662 996 Gene3D - 174 258 - -
Lac8g2662 996 Gene3D - 945 996 - -
Lac8g2662 996 NCBIfam plasma-membrane proton-efflux P-type ATPase 76 852 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g2308 Lac-Chr6:40409927 Lac8g2662 Lac-Chr8:44135151 0.00E+00 dispersed
Lac8g2662 Lac-Chr8:44135151 Lac9g1422 Lac-Chr9:32120529 1.20E-08 dispersed
Lac10g0381 Lac-Chr10:2961247 Lac8g2662 Lac-Chr8:44135151 0.00E+00 wgd
Lac3g0642 Lac-Chr3:4975235 Lac8g2662 Lac-Chr8:44135151 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2662 K01535 - csv:101211115 1767.67