Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2759 ATGAATGCGAATAGTTCTCGATTTCAATCGTTTGGTCAGACTGAGATTAACTGGGACAAGCTTGATAAAGCAAAATTTTATGGCGTGGGAGCTGGTCTCTTTACTGGGATTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACAAGGATGCAGGTTGCTGTGAAGGATTCTGCCGAGAAAAATGCATTATCTGTTGTTAAAGGCTTACTGAAGAATGATGGGGTTCCTGGTCTTTACAGAGGGTTCGGCACAGTAATCACCGGTGCAATTCCTGCAAGGATTATATTTCTTACCGCTTTGGAGACGACCAAAGTGGGAGCCTTTAAAATGGTTGAGCCATTTAAATTTTCTGAACCTACCCAGGCTGCAATAGCTAATGGATTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTTTTCGTTCCAATTGATGTGATTAGTCAAAAGCTAATGGTTCAAGGATACTCGGGCAATACAAGATATAATGGTGGTTTAGACGTTGCTCGTAAACTGATAAAGGCTAATGGGATCAGGGGATTGTACAAAGGTTTTGGGTTATCTGTTATGACATACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCGTCATCTGGAGGTTCTTAGGCCAGAACGCTGCTTCTGAGAAATTTGCTCCTAGCCATGCACAACTTATTTCAGTTCAAGCTGCGGGTGGGATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCATTGGACACTATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTAATTGCTGAGGATGGATGGAAAGGCTTTTACAGGGGGTTGGGTCCTCGATTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACTTGAGTATGGACTTCTCACAAAATATAGCCTGCACTCTATTCAGCGCTTGTGTGCAAAAGATGTGCAGACTTGACCTCCGCGACGATTTTAGAGCCGAAGCTCGTCTGGTTTCAACTCTTTTTTTTCCCCTCACAGTCACAAGGGCAGGTTCAGGTTCAGGTTCAGCATAG 1101 43.96 MNANSSRFQSFGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVVKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAFKMVEPFKFSEPTQAAIANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKANGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRVIWRFLGQNAASEKFAPSHAQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGFYRGLGPRFFSMSAWGTSMILAYEYLSMDFSQNIACTLFSACVQKMCRLDLRDDFRAEARLVSTLFFPLTVTRAGSGSGSA 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 44904718 44907885 - Lag0030146.1 Lac8g2759 618593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2759 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 19 107 IPR018108 -
Lac8g2759 366 Gene3D Mitochondrial carrier domain 26 320 IPR023395 -
Lac8g2759 366 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 312 - -
Lac8g2759 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Lac8g2759 366 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085(InterPro)
Lac8g2759 366 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085(InterPro)
Lac8g2759 366 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085(InterPro)
Lac8g2759 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 314 IPR018108 -
Lac8g2759 366 FunFam Mitochondrial substrate carrier family protein 27 317 - -
Lac8g2759 366 SUPERFAMILY Mitochondrial carrier 19 311 IPR023395 -
Lac8g2759 366 Pfam Mitochondrial carrier protein 124 211 IPR018108 -
Lac8g2759 366 Pfam Mitochondrial carrier protein 31 106 IPR018108 -
Lac8g2759 366 Pfam Mitochondrial carrier protein 235 312 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0482 Lac-Chr2:3519883 Lac8g2759 Lac-Chr8:44904718 2.50E-67 dispersed
Lac7g0998 Lac-Chr7:8606993 Lac8g2759 Lac-Chr8:44904718 4.70E-83 dispersed
Lac8g2759 Lac-Chr8:44904718 Lac9g2357 Lac-Chr9:42820589 6.30E-29 dispersed
Lac8g2759 Lac-Chr8:44904718 Lac4g3001 Lac-Chr4:48277704 9.70E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2759 K15121 - csv:101206140 592.423