Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2760 ATGATTCCAAGAGCCGGGAAACCAATCGATGTCGCCGAGAACGATGGGTGCCGTTCCGACGAGGTGAATCTTGTGGAGCAACAGCAAGAAAAGCGAAAAAACGATGTGAAAAAGGAAGTGGGTCGCAGCTTCATTTTCACAGAAGCCTATGATGCTCTTGATCCAACTGGAAACATCACTATCAAGTGGGATGTCATGGCCTGGAACCCAGATGGTTATGTGGCTGTTGTGAAAATCTACAATTTCCAGCAATATCGTCACATCCAAGCCCCGGGTTGGTCGCTGAGATGGACGTGGGCAAAAAAGGAGGTAATATGGAGCATGGTGGGAGGCCAAGCCACAGAGCAAGGAGATTGTTCAAGATACAAAGCAAACATCCCACATTGCTGCAAGAAAGATCCAACGGTGGTTGATCTGCTACCAGCAACTCCTTACAATTCACAGGTTGCAAATTGTTGTAAAGGTGGAGTACTTACCTCTTGGGTCCAAGATCCTGGAAATGCAATGAGCTCATTTCAGCTGAGTGTTGGTTCAGCTGGAACCAGCAATAGGACCGTCAGAATGCCTAAGAACTTCATTTTGAAAGCACCAGGGCCCGGCTATACGTGTGGACCTGCTACGGTCGTTGAACCAAGTACCTTTATTTCAGCAGATAAGAGAAGGGTCACTCAGGCTTCGATGACATGGAATATTACGTGCACATATTCCCAATTTTTGGCTCACAAAAATCCCAGTTGCTGCGTCTCAATGTCATCCTTCTACAATGACAGCATTGCAACCTGCTCCAAATGTTCTTGCGGCTGCCAAAGCAACATGGTTCAGACAGGAAGCTGCATTGAGGAAAATTCACATTACTTATCACCCGTCGTTTCCAACTCCGGCAAGAACTTTGAACCTCTGGTTCAATGTACAAGCCACATGTGCCCGATCCGAGTTCACTGGCACATTAAGCTCAACTACAGAGAATACTGGAGAGTCAAGATCACCATTACAAACTTCAACTACAGAAGGAACTATTCAGACTGGAACTTAGTCATTCAGCACCCCAACCTCAGCAATGTGACAAAGATATTCAGTTTCAACTACAAGTCTCTTGCTCCTTACGCCACAATAAATGATACAGCAATGGTATGGGGAATCAAGTTCTACAACAATATGCTAATACAAGCGGGTCCTCTTGGTAATGTACAGACAGAGATGATTTTTGGAAAGGATAAAGAAAGCTTTACGTTTGACGAAGGTTGGGGCTTCCCTCGAAGGATCTACTTTAATGGCGAAAACTGCGTCATGCCGCCTCCCGACGCCTATCCGCGGTTGCCGAACGCCGGTTCCGATGAAAATATCTCCTTTTTTGCTCTAATTTAG 1365 45.86 MIPRAGKPIDVAENDGCRSDEVNLVEQQQEKRKNDVKKEVGRSFIFTEAYDALDPTGNITIKWDVMAWNPDGYVAVVKIYNFQQYRHIQAPGWSLRWTWAKKEVIWSMVGGQATEQGDCSRYKANIPHCCKKDPTVVDLLPATPYNSQVANCCKGGVLTSWVQDPGNAMSSFQLSVGSAGTSNRTVRMPKNFILKAPGPGYTCGPATVVEPSTFISADKRRVTQASMTWNITCTYSQFLAHKNPSCCVSMSSFYNDSIATCSKCSCGCQSNMVQTGSCIEENSHYLSPVVSNSGKNFEPLVQCTSHMCPIRVHWHIKLNYREYWRVKITITNFNYRRNYSDWNLVIQHPNLSNVTKIFSFNYKSLAPYATINDTAMVWGIKFYNNMLIQAGPLGNVQTEMIFGKDKESFTFDEGWGFPRRIYFNGENCVMPPPDAYPRLPNAGSDENISFFALI 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 44907949 44911939 + Lag0030147.1 Lac8g2760 618594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2760 454 PANTHER PROTEIN COBRA 44 451 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Lac8g2760 454 PIRSF COBRA 24 454 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Lac8g2760 454 Pfam COBRA-like protein 73 236 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0548 Lac-Chr3:4184739 Lac8g2760 Lac-Chr8:44907949 1.00E-198 dispersed
Lac4g0330 Lac-Chr4:7562297 Lac8g2760 Lac-Chr8:44907949 1.70E-52 dispersed
Lac4g0341 Lac-Chr4:7891089 Lac8g2760 Lac-Chr8:44907949 5.70E-170 dispersed
Lac4g0342 Lac-Chr4:7893385 Lac8g2760 Lac-Chr8:44907949 1.20E-34 dispersed
Lac4g0343 Lac-Chr4:7894194 Lac8g2760 Lac-Chr8:44907949 4.60E-97 dispersed
Lac4g1354 Lac-Chr4:31724713 Lac8g2760 Lac-Chr8:44907949 5.10E-46 dispersed
Lac4g1355 Lac-Chr4:31732091 Lac8g2760 Lac-Chr8:44907949 2.40E-46 dispersed
Lac5g2477 Lac-Chr5:43344014 Lac8g2760 Lac-Chr8:44907949 8.40E-135 dispersed
Lac7g0923 Lac-Chr7:7737569 Lac8g2760 Lac-Chr8:44907949 1.50E-30 dispersed
Lac8g2760 Lac-Chr8:44907949 Lac3g0547 Lac-Chr3:4181393 2.80E-167 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2760 - - - 0.0