Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac8g2802 | ATGGTGAAAGATATGGCGAAGGAAATTGACGACGGTGACGACGGAAAGAAGTCGACGGCGACAATGTGTTCTGGGTGCAATAAGGCCAATAGTTTTGCATCGTTGGATGTAAGAGAGAGAAATGCTCAGGAACCAATGGCGGTTCCCGCGGTTCAGTTCCCGATCTTCATGGCTGTCAGAGTGCTCGGGATGATTGTGGCAGCTCTTGCCATTATCTGGACCTTGCACTTCCGTGGAGGATTGGCGCTTATCTCAGACAACAAGGATCTCATCTTCAATGTCCATCCTGTTCTTATGGTGATTGGACTTATACTTCTAAATGGTGAAGCAATGTTAGCATACAAGACAGTTTCAGGAACCAAAAACTTCAAAAAATTAGTTCATCTTGCCGTACAGTTTGTTGCATTCTGTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAATGACAAAGGGATCGACAACTTTTACAGTCTGCATTCGTGGTTGGGCCTAGTTTCCATCTTTCTGTTTGGCATCCAGTGGACTGCAGGATTTGTAACTTTTTGGTACCCAGGTGGCTCCAGAAATAGCAGAGCTACTCTGTTGCCATGGCATGTTTTCTTTGGCATTTACATATATGGCATCTCCATTGCTACAGCTGTTACTGGATTGTTAGAAAAGGCTACATTCCTTCAAACCAGCAAGGTAATATTACGCTATTCGAACGAGGCTTTGCTGATAAATTCATTGGGTATCCTCATTGTTCTTCTGGGCGGCCTCGTTATTCTTGCCGTTATCGCTCCATCCAATGGCAAAGGTGACATCTACAGAGGGCCAGCAGAATAG | 834 | 45.2 | MVKDMAKEIDDGDDGKKSTATMCSGCNKANSFASLDVRERNAQEPMAVPAVQFPIFMAVRVLGMIVAALAIIWTLHFRGGLALISDNKDLIFNVHPVLMVIGLILLNGEAMLAYKTVSGTKNFKKLVHLAVQFVAFCLSLIGIWAALKFHNDKGIDNFYSLHSWLGLVSIFLFGIQWTAGFVTFWYPGGSRNSRATLLPWHVFFGIYIYGISIATAVTGLLEKATFLQTSKVILRYSNEALLINSLGILIVLLGGLVILAVIAPSNGKGDIYRGPAE | 277 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 45221650 | 45227499 | - | Lag0030189.1 | Lac8g2802 | 618636 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac8g2802 | 277 | Pfam | Eukaryotic cytochrome b561 | 94 | 226 | IPR006593 | - | |
| Lac8g2802 | 277 | ProSiteProfiles | Cytochrome b561 domain profile. | 58 | 262 | IPR006593 | - | |
| Lac8g2802 | 277 | Gene3D | - | 46 | 274 | - | - | |
| Lac8g2802 | 277 | FunFam | Cytochrome b reductase 1 | 49 | 270 | - | - | |
| Lac8g2802 | 277 | CDD | Cyt_b561_ACYB-1_like | 85 | 228 | - | - | |
| Lac8g2802 | 277 | SMART | 561_7 | 94 | 220 | IPR006593 | - | |
| Lac8g2802 | 277 | PANTHER | CYTOCHROME B561-RELATED | 46 | 266 | IPR043205 | GO:0016491(PANTHER)|GO:0016491(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac11g0019 | Lac-Chr11:190025 | Lac8g2802 | Lac-Chr8:45221650 | 8.90E-53 | dispersed | |
| Lac13g0449 | Lac-Chr13:3231072 | Lac8g2802 | Lac-Chr8:45221650 | 2.40E-44 | dispersed | |
| Lac13g1518 | Lac-Chr13:15437720 | Lac8g2802 | Lac-Chr8:45221650 | 3.10E-47 | dispersed | |
| Lac8g2207 | Lac-Chr8:40394878 | Lac8g2802 | Lac-Chr8:45221650 | 2.40E-42 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac8g2802 | K08360 | - | csv:101212633 | 400.208 |