Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2805 ATGGCTTCTTCACCTTCTCCAAGTACTTCTCCTCCTGAAAATCCGTCAGATTCCACAGCTTTTTCACCTCCTTCTCCTTCTCCTCCTGCGGAGTCTGCATTATCTCCCTCATCCCCTACATCTTCTGTGCCTAATCAGACCGGTGAACCTCCTTCATCACCTTCTACTCCTTCAGCTCCACCTCCTCAATCACCACCAACTGTTCCTGATTCTCCACCTCCTTCTCCTACATTGTCTCCTCCTCCTGTGACAGCATCCCCACCTCCTTCTCCTGCTGGTTCCCCACCTCCGCCTCTACAATCGTCGCCATCGCCGCCGCCTCCTTCACCATCTTCCTCCCCACCACCACCTCCAACATCGACCTCTCCACCACCACCTTCAACATCACCACCACCACCTTCCTCTGATTCACCACCTCCTCCAGACCCATCCACTGCCTCTCCTCCTCCTGAAGCTTCACCTCCCCCTCCTGATTCATTGCCGCCGCCACCACCAGCAGGTGGTTCTCCACCTCCTCAATCCAATCCTAGACCTCCATTTTCAACTCACTCTCCCCCTCCCCCTGATGTAATTTCGCCTTCTCCACCTCCACCAACTAAAGTCCCGACACCGCCTTCACCAACAGGAGAATCACCTAAAGTATCTCCCCCGTCCCCCAAGGTTTCTCCTCCTCCTTCTGATTCTCAATCTCCACCTTCAGTTGATGCCCCTCCACCAAGAACTACAGTACCATCACCTCCTCCTTCAGTCCCTTCATCATCTGCTCCTCCTCCAGTTACTGTTCCTGGTCCTCCATCTAATTCATCTGGTGCGAGTCCTACTATCCCTCCAACTTCTGTTACACCTGAACGACCAATTCCAACAATCAATGGTACCAATGTTACAGCAAATGACTCAATCAGAGGTCGGGGTTTCAGCACTGGAACATCTGTGGCAGTTGGCAGCGTGGTTGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCTATGTGGTTTGTTCAGAAACGGAAGAGACGGAAGAAGAATATCCCTTACACAATGCCCTCTCCTTTTTCCTCCCAAAACTCAGATTCCTTTTTCCTAAGGCCCAATTCTTCAGCTCCCGTGGTAGGAAGTCGTACTGATAGTGATTTCAAGTATTCAGCATCAGAAGGTGGAGTAGGTAATTCAAGATCATTTCCTTATGAAGAGCTGCACCAGGCAACAAGTGGATTTTCATCGAATAATCTTTTGGGGGAAGGTGGATTTGGTTGTGTGTACAAAGGCACCCTTTCAGATGGAAGAGACGTAGCCGTTAAACAACTTAAAGTGGGTGGTGGACAGGGAGAACGAGAGTTCAGAGCCGAAGTTGAGATTATTAGCCGAGTACACCATCGACATTTGGTTTCCCTGGTCGGTTACTGTATCTCTGATTACCAAAGATTGCTTGTGTATGATTATGTTCCAAACAATACCCTTCATTACCATCTGCACGGTTCAAACAGGCCAGTTCTGGCTTGGGCTACACGTGTTCGAATTGCTGCTGGTGCAGCCCGTGGAATTGCCTACCTACATGAAGATTGCCATCCACGCATTATTCACAGGGATATTAAATCATCTAACATTCTGCTCGATATCAACTTTGAAGCTCAGGTTGCAGATTTTGGGCTTGCTAAATTGGCATTGGATTCACATACACATGTAACAACTCGTGTAATGGGAACGTTTGGATACATGGCTCCAGAATACGCAACGAGTGGGAAATTGACGGATAAATCTGATGTTTTCTCTTTTGGGGTTGTACTTTTGGAGTTAATTTCTGGTCGCAAGCCTGTAGATTCTTCTCAGCCTCTAGGGGATGAGAGTTTAGTTGAATGGGCTCGACCATTGCTTGCACAAGCTATTGAGGATGAGAATTTTGAAGAACTGGTGGATCCAAGGCTAGACAACAATTATATCGACAGAGAAATGTTTCGGATGATCGAAGCAGCCGCCGCTTGCGTTCGTCATTCAGCAGTAAAGAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTTGCAAATGGGGTGAAACCTGGGCAAAGTGGAGTATTTGATTCAGCTGAACATTCTGCTCAGATCAGAATGTTTCAAAGAATGGCTTTTGGCAGTCAGGATTACAGTTACGGTTATTCCGATCGAGATCGGGATCGAAGTCGAAGTTATAGTCAAAGTCAGAGTAGCTGGAGTAGAGAATCCAGGGATCAAAGTCCCTCGGCGCCTATTAATCGATCCCGGCAATGGAACATCTGA 2292 47.99 MASSPSPSTSPPENPSDSTAFSPPSPSPPAESALSPSSPTSSVPNQTGEPPSSPSTPSAPPPQSPPTVPDSPPPSPTLSPPPVTASPPPSPAGSPPPPLQSSPSPPPPSPSSSPPPPPTSTSPPPPSTSPPPPSSDSPPPPDPSTASPPPEASPPPPDSLPPPPPAGGSPPPQSNPRPPFSTHSPPPPDVISPSPPPPTKVPTPPSPTGESPKVSPPSPKVSPPPSDSQSPPSVDAPPPRTTVPSPPPSVPSSSAPPPVTVPGPPSNSSGASPTIPPTSVTPERPIPTINGTNVTANDSIRGRGFSTGTSVAVGSVVGVLVLSLVIMAMWFVQKRKRRKKNIPYTMPSPFSSQNSDSFFLRPNSSAPVVGSRTDSDFKYSASEGGVGNSRSFPYEELHQATSGFSSNNLLGEGGFGCVYKGTLSDGRDVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDYQRLLVYDYVPNNTLHYHLHGSNRPVLAWATRVRIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSHTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELISGRKPVDSSQPLGDESLVEWARPLLAQAIEDENFEELVDPRLDNNYIDREMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLANGVKPGQSGVFDSAEHSAQIRMFQRMAFGSQDYSYGYSDRDRDRSRSYSQSQSSWSRESRDQSPSAPINRSRQWNI 763
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 45266396 45272991 - Lag0030192.1 Lac8g2805 618639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2805 763 MobiDBLite consensus disorder prediction 8 33 - -
Lac8g2805 763 MobiDBLite consensus disorder prediction 1 300 - -
Lac8g2805 763 Gene3D Phosphorylase Kinase; domain 1 376 479 - -
Lac8g2805 763 SUPERFAMILY Protein kinase-like (PK-like) 381 677 IPR011009 -
Lac8g2805 763 MobiDBLite consensus disorder prediction 735 763 - -
Lac8g2805 763 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 290 713 IPR047117 -
Lac8g2805 763 MobiDBLite consensus disorder prediction 723 763 - -
Lac8g2805 763 MobiDBLite consensus disorder prediction 284 300 - -
Lac8g2805 763 FunFam Proline-rich receptor-like protein kinase PERK8 377 479 - -
Lac8g2805 763 ProSiteProfiles Protein kinase domain profile. 404 665 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac8g2805 763 Gene3D Transferase(Phosphotransferase) domain 1 480 692 - -
Lac8g2805 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac8g2805 763 MobiDBLite consensus disorder prediction 50 264 - -
Lac8g2805 763 ProSitePatterns Protein kinases ATP-binding region signature. 410 432 IPR017441 GO:0005524(InterPro)
Lac8g2805 763 SMART serkin_6 404 660 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac8g2805 763 FunFam proline-rich receptor-like protein kinase PERK8 480 692 - -
Lac8g2805 763 MobiDBLite consensus disorder prediction 34 49 - -
Lac8g2805 763 Pfam Protein tyrosine and serine/threonine kinase 407 677 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac8g2805 763 CDD STKc_IRAK 410 680 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0200 Lac-Chr13:1385928 Lac8g2805 Lac-Chr8:45266396 1.50E-141 dispersed
Lac13g0438 Lac-Chr13:3095235 Lac8g2805 Lac-Chr8:45266396 2.30E-147 dispersed
Lac5g2874 Lac-Chr5:46972873 Lac8g2805 Lac-Chr8:45266396 2.90E-74 dispersed
Lac8g2805 Lac-Chr8:45266396 Lac9g1665 Lac-Chr9:36012322 4.60E-122 dispersed
Lac9g2597 Lac-Chr9:44494276 Lac8g2805 Lac-Chr8:45266396 9.50E-66 dispersed
Lac8g2805 Lac-Chr8:45266396 Lac6g2998 Lac-Chr6:47585561 1.20E-130 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86405 PF07714 PK_Tyr_Ser-Thr 1.90E-45 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2805 - - - 0.0