Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac8g2821 | ATGGCCGTCACGTTTGCACTCGTTGTTCTTACAACCCTGGCCTTGGCTGCTGCGACGTCGTTTTTCATCTTCTCTTTGTTATACCACACCCTTTCCTCCTACTGCCTCACTCCTAGACGCATCAAAAACAAGATGGCCAAGCAAGGTGTGCGTGGCCCCAAACCCCGCCCTCTCCTCGGCAACATCCTCGACGTCGCCGCCCTCCTCTCCAAATCCACCTCCTCCGACATGCCCTCTATCTCCCACGACCTCGTCCCCCGCCTCCTCCCCCACTTCCTCGCCTGGTCCGCCCAATTCGGTAAGAGATTTATCTTTTGGAATGGGATCGAGCCGAGAATGTGTCTGACCGAAACGGATTTGATCAAAGAGCTTTTGTCGAAATACAGCGCGGTTTCGGGCAAGTCGTGGCTTCAACAACAGGGCTCCAAGCACTTCATTGGCCGAGGTCTCTTAATGGCCAACGGCCAAAACTGGTTCCACCAACGCCATATCGTCGCGCCGGCTTTCGTCGGCGACCGACTCAAGAGTTATGCGGGGTACATGGTGGAGTGCACAAGAGAGATGCTTCAATCAATAGAAAATGAGGTAAAATCGGGGCGATCCGAGTTTGAAATCGGCGAGTATATGACCAGACTCACTGCTGACATAATTTCCAGAACCGAGTTTGAAAGCAGTTATGAAAAAGGAAAACAAATTTTTCATTTGCTTACTGTTCTACAGCATCTCTGTGCCCAGGCCAGCCGCCATCTCTGCCTTCCCGGTAGCCGATTTTTTCCAAGTAAATATAACAGAGAGATAAAGGCATTGAAGGGGAAAGTGGAGGGATTGTTAATGGAGATAATACAAAGCAGAAGGGACTGTGTGGAGATTGGGAGGAGCAGTTCATATGGAAATGATTTATTGGGAATGTTGCTGAATGAGATGCAGAAGAAAAAAGATGGAAATGGTTTGAGTTTGAATTTGCAAATTATAATGGATGAATGCAAGACCTTCTTCTTTGCTGGCCATGAAACAACTGCTCTTTTGCTCACTTGGACTGTAATGTTATTAGCCACTAACCCTTCTTGGCAACAAAAGGTTCGAGCCGAAGTTATGACCGTTTGCAATGGCCAAACTCCCTCACTCGATCATCTCTCCAAACTCTCCCTGTTGAATATGGTGATAAATGAATCATTGCGACTATATCCACCGGCAAGTATTCTTCCAAGAATGGCATTTGAGGATATAAAACTTGGAGATCTTGAGATTCCGAAAGGATTGTCAATATGGATTCCAGTATTGGCCATTCACCACAGTGAAGAGTTATGGGGGAAAGATGTGAATGAGTTCAACCCAGAACGATTTAGCAATTCGAAAGCCTTTACGTCGGGGAGATTCATCCCTTTTGCTTCGGGTCCTCGAAACTGCGTCGGCCAATCGTTTGCACTCATGGAAACCAAGATCATCTTGGCTATGCTCATCTCCAAGTTTAGCTTTACAATTTCGGACAATTATCGCCATGCACCTGTGGTTGTGCTTACTATAAAACCTAAATATGGAGTTCAAGTTTGCTTGAAGCCTTTGAATGAATAA | 1572 | 46.56 | MAVTFALVVLTTLALAAATSFFIFSLLYHTLSSYCLTPRRIKNKMAKQGVRGPKPRPLLGNILDVAALLSKSTSSDMPSISHDLVPRLLPHFLAWSAQFGKRFIFWNGIEPRMCLTETDLIKELLSKYSAVSGKSWLQQQGSKHFIGRGLLMANGQNWFHQRHIVAPAFVGDRLKSYAGYMVECTREMLQSIENEVKSGRSEFEIGEYMTRLTADIISRTEFESSYEKGKQIFHLLTVLQHLCAQASRHLCLPGSRFFPSKYNREIKALKGKVEGLLMEIIQSRRDCVEIGRSSSYGNDLLGMLLNEMQKKKDGNGLSLNLQIIMDECKTFFFAGHETTALLLTWTVMLLATNPSWQQKVRAEVMTVCNGQTPSLDHLSKLSLLNMVINESLRLYPPASILPRMAFEDIKLGDLEIPKGLSIWIPVLAIHHSEELWGKDVNEFNPERFSNSKAFTSGRFIPFASGPRNCVGQSFALMETKIILAMLISKFSFTISDNYRHAPVVVLTIKPKYGVQVCLKPLNE | 523 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 45447759 | 45450969 | + | Lag0030208.1 | Lac8g2821 | 618655 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac8g2821 | 523 | CDD | CYP72_clan | 89 | 515 | - | - | |
| Lac8g2821 | 523 | SUPERFAMILY | Cytochrome P450 | 52 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g2821 | 523 | Gene3D | Cytochrome P450 | 35 | 523 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g2821 | 523 | PRINTS | E-class P450 group I signature | 96 | 115 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g2821 | 523 | PRINTS | E-class P450 group I signature | 459 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g2821 | 523 | PRINTS | E-class P450 group I signature | 469 | 492 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g2821 | 523 | PRINTS | E-class P450 group I signature | 212 | 230 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g2821 | 523 | PRINTS | E-class P450 group I signature | 343 | 369 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g2821 | 523 | PRINTS | E-class P450 group I signature | 323 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g2821 | 523 | PRINTS | E-class P450 group I signature | 426 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g2821 | 523 | PRINTS | P450 superfamily signature | 386 | 397 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g2821 | 523 | PRINTS | P450 superfamily signature | 469 | 480 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g2821 | 523 | PRINTS | P450 superfamily signature | 460 | 469 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g2821 | 523 | PRINTS | P450 superfamily signature | 334 | 351 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g2821 | 523 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 21 | 514 | IPR050665 | GO:0004497(PANTHER) | |
| Lac8g2821 | 523 | Pfam | Cytochrome P450 | 97 | 496 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac13g1271 | Lac-Chr13:11538889 | Lac8g2821 | Lac-Chr8:45447759 | 1.90E-82 | dispersed | |
| Lac3g0839 | Lac-Chr3:6698421 | Lac8g2821 | Lac-Chr8:45447759 | 7.80E-92 | dispersed | |
| Lac5g2937 | Lac-Chr5:47435976 | Lac8g2821 | Lac-Chr8:45447759 | 5.20E-65 | dispersed | |
| Lac6g2958 | Lac-Chr6:47176422 | Lac8g2821 | Lac-Chr8:45447759 | 8.70E-96 | dispersed | |
| Lac8g2821 | Lac-Chr8:45447759 | Lac11g2180 | Lac-Chr11:37942210 | 1.50E-23 | dispersed | |
| Lac5g2316 | Lac-Chr5:41818343 | Lac8g2821 | Lac-Chr8:45447759 | 3.80E-36 | transposed | |
| Lac11g0177 | Lac-Chr11:1671895 | Lac8g2821 | Lac-Chr8:45447759 | 4.50E-238 | wgd | |
| Lac13g1270 | Lac-Chr13:11504353 | Lac8g2821 | Lac-Chr8:45447759 | 6.40E-83 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac8g2821 | K10717 | - | csv:101215037 | 951.044 |