Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac8g2852 | ATGTCAAGAGAAAGGGAATTGTCGGAGGTGGAGGAGATAGGGAAGAAGATAAAGAGGGAAGTTGAAGGGTTGTATCCTAATTTGATGGGAAGAAGGCACATTTTGAGTCCAGCAGCTGGGACATTGAATACAATAACTCCATGTGCAGCTTGTAAACTTCTAAGAAGAAGGTGTGCCCAAGAATGTCCATTTTCTCCTTACTTCTCTCCACATGAACCCCACAAATTTGCTTCTGTTCACAAGGTTTTTGGTGCCAGCAACGTTGCTAAGATGCTCATGGAGGTACCGGAAAGCCAAAGAGCCGACGCGGCAAACAGCCTAGTTTATGAAGCCAATCTGAGGCTGAGAGATCCAGTCTACGGTTGCATGGGCGCCATTTCAGCTCTTCAACACCAACTTCAAACTTTACAAGCTGAGCTCAATGCTATTAGAACTGAGATTTTGAAGTACAAATATAGAGAAGCCATAATTCCTTCTACTTCTTCTTCCTCCTCTTCCCACATCGCTTTGATTTCGGCAGCCGGTGTCGTCGTTTCCACCACCGCAACGCCACCCGCAGCCCCGCCGACTCCGCCACATTCCCAGCCACCTCCGCTCTCTCTTCCGCCGCCTCTTCCTCCGTCTTCGTCTTCCATCTATTCCACACCCATCAGCAGTACTACTGCCCCTGAATTTAACCCCATCTCAACCGAACATATTTCCTACTTCGGATGA | 714 | 48.18 | MSRERELSEVEEIGKKIKREVEGLYPNLMGRRHILSPAAGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQAELNAIRTEILKYKYREAIIPSTSSSSSSHIALISAAGVVVSTTATPPAAPPTPPHSQPPPLSLPPPLPPSSSSIYSTPISSTTAPEFNPISTEHISYFG | 237 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 45705239 | 45706795 | + | Lag0030239.1 | Lac8g2852 | 618686 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac8g2852 | 237 | MobiDBLite | consensus disorder prediction | 181 | 225 | - | - | |
Lac8g2852 | 237 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 45 | 166 | - | - | |
Lac8g2852 | 237 | Coils | Coil | 126 | 153 | - | - | |
Lac8g2852 | 237 | Pfam | Lateral organ boundaries (LOB) domain | 47 | 143 | IPR004883 | - | |
Lac8g2852 | 237 | MobiDBLite | consensus disorder prediction | 184 | 210 | - | - | |
Lac8g2852 | 237 | MobiDBLite | consensus disorder prediction | 211 | 225 | - | - | |
Lac8g2852 | 237 | ProSiteProfiles | LOB domain profile. | 46 | 147 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac8g2852 | Lac-Chr8:45705239 | Lac9g2273 | Lac-Chr9:42086121 | 2.00E-39 | dispersed | |
Lac13g1221 | Lac-Chr13:10860305 | Lac8g2852 | Lac-Chr8:45705239 | 4.60E-60 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
24362 | PF03195 | LOB | 1.10E-40 | No_clan | Lac | TF |
Pathway information
