Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac8g2885 | ATGACAAATTATTATGATATTGATGACATTTTAGCGGAGGAAGAGCTTGTCTCGGTTTTGTTCCAAAAGGCAGTTAACGGAGTTGGAATCGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCGCAAGAGTTACATCATAGACAAGTGGCGGTTATGGGCTTACCTGCCTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGATCTAGATGTCAATATTTCTATGAATTTGGATGCAAGATTGCACCACTGATTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAAGTGCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATACTTGACACTTCTATCAAAAGAAGAAATCAAAATGTATGAGGCAGCTCAATCCTCTATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCCTAGATTTCAGATAGCATCCTTTCTTGGAAGGAAGAGGAAGTCATCTGAGTAG | 558 | 41.22 | MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSRYKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRKRKSSE | 185 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 45994197 | 45996460 | - | Lag0030272.1 | Lac8g2885 | 618719 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac8g2885 | 185 | Gene3D | - | 1 | 167 | IPR038437 | - | |
| Lac8g2885 | 185 | Pfam | GINS complex protein helical bundle domain | 66 | 165 | IPR021151 | - | |
| Lac8g2885 | 185 | SUPERFAMILY | GINS helical bundle-like | 65 | 166 | IPR036224 | - | |
| Lac8g2885 | 185 | CDD | GINS_A_psf3 | 65 | 167 | - | - | |
| Lac8g2885 | 185 | Pfam | GINS/PriA/YqbF domain | 5 | 55 | - | - | |
| Lac8g2885 | 185 | SUPERFAMILY | PriA/YqbF domain | 1 | 66 | - | - | |
| Lac8g2885 | 185 | CDD | GINS_B_Psf3 | 4 | 66 | - | - | |
| Lac8g2885 | 185 | PANTHER | UNCHARACTERIZED | 1 | 183 | IPR010492 | GO:0000811(PANTHER)|GO:1902975(PANTHER) |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac8g2885 | K10734 | - | csv:101203869 | 343.199 |