Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac8g2911 | ATGACGACAATCGAAAACTCCCACGTTGTTGCAATGGAGGAAGAGCAAGAAGAACGGCCTCGCCGGCTTTCTACAGCCGCCACTGTCGCCTCTCCGGCTTCTGATGATGTGCGGCGGTGCTCGGGCCAGTCGAGGGCTGAGATTGTGGGGGAGGCGGCGCCGGTGCCGGAGAAAAGAAGGGGATCCTCTGTCTCGGAGTGCTCTGTGGAGATGGATCTGGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCCGGATTTGCCATCTGAGTTTGGATGCTTCTAATCACGAATCTGGAATCCCCATTGAACTGGGTTGTTCTTGTAAGGAAGATTTGGCTGCTGCTCATAAGCAGTGTGCTGAGGCTTGGTTCAGGATTAAGGGCGACATCACCTGTGAAATCTGTGGATCAATTGCACACAATGTTACTGGTACTTATGAAGCCGATTCGACAGAGCAGCGCAATGAGTCAAGCGATGCAGCGACAGCAACCGCTGCAGCCTCCGTCGTGGTGCCACCACACTCTACAGAGGCTCGGAACTTCTGGCAGGGCCACAGGTTCCTGAATTTCTTACTCGCCTGCATGGTTTTCGCCTTCGTCATATCATGGCTATTTCACTTCAAAATACCCTCATAG | 657 | 52.66 | MTTIENSHVVAMEEEQEERPRRLSTAATVASPASDDVRRCSGQSRAEIVGEAAPVPEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKEDLAAAHKQCAEAWFRIKGDITCEICGSIAHNVTGTYEADSTEQRNESSDAATATAAASVVVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 46234570 | 46237033 | + | Lag0030298.1 | Lac8g2911 | 618745 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac8g2911 | 218 | SUPERFAMILY | RING/U-box | 88 | 145 | - | - | |
Lac8g2911 | 218 | PANTHER | ZINC FINGER, RING-CH-TYPE | 27 | 217 | - | - | |
Lac8g2911 | 218 | Pfam | RING-variant domain | 91 | 142 | IPR011016 | GO:0008270(InterPro) | |
Lac8g2911 | 218 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 79 | 152 | IPR013083 | - | |
Lac8g2911 | 218 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 83 | 149 | IPR011016 | GO:0008270(InterPro) | |
Lac8g2911 | 218 | SMART | ringv_2 | 90 | 143 | IPR011016 | GO:0008270(InterPro) | |
Lac8g2911 | 218 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac1g3424 | Lac-Chr1:53716956 | Lac8g2911 | Lac-Chr8:46234570 | 4.30E-16 | dispersed | |
Lac7g2581 | Lac-Chr7:44193092 | Lac8g2911 | Lac-Chr8:46234570 | 9.60E-09 | dispersed | |
Lac1g0723 | Lac-Chr1:17948921 | Lac8g2911 | Lac-Chr8:46234570 | 1.10E-10 | transposed | |
Lac1g1919 | Lac-Chr1:40874212 | Lac8g2911 | Lac-Chr8:46234570 | 1.40E-47 | wgd | |
Lac10g3167 | Lac-Chr10:45883863 | Lac8g2911 | Lac-Chr8:46234570 | 1.20E-50 | wgd | |
Lac7g2790 | Lac-Chr7:47030481 | Lac8g2911 | Lac-Chr8:46234570 | 7.70E-41 | wgd |
Pathway information
