Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac8g2937 | ATGGCGAATCCATGGTGGGGTGGAATTGGGAATCTTTCGATCAGGGGAGTTGATTCCTTATCTTCCTTTGATCTTAAGAACCCACAAGAACAAGACCATGAACAACGACAACATCGTCAAATTGGATCTTCAAGTGACAACCCTGATTCCAACACCCGACAAGAAGAACACGATATTAAGAATGAAGATCGGCATGGAGCTAAGAACACTAGGCGGCCACGAGGGCGGCCGCCGGGCTCAAAAAACAAGCCGAAGCCACCGATTGTCCTCACCAAAGCCACTCCCAACGCTCTCCAAAGCCACGTATTCGAAATCGCCGCCGCCACCGACATCGCCCACTCCATTTCCACCTTCGCCAACCGCCGCCGCCGTGGAGTCTCCATCCTCAGCGCCACCGGCCTCGTCGCCAACGTCACTCTCCGCCAGCCCGCCGGCGCCGTCATCACCCTCCACGAACGCTTCGAGATCCTGTCTCTCTCCGGCGCCTTCCTCCCGCCGCCGTCCCCCCAGGGCGCCACTGGCTTGACCGTCTATCTCGCCGGCGGCCAGGGACGCGTCGTCGGCGGCATGGTCGCCGGTCCCTTCGTCGCCGCCGGCCCGGTCATAGTAATTGCAGCTTCGTTCACCAACGCCATATATGAAAGATTGCCGATTGAGGAAGATGATCAGAAAGAGAATGCAAATGAGGAAATGAAAATGGAAAAGCAAGAGGAAGATCATAGTAATGGAAACAATTCAGTGGCCGGAGAATCATCGGCCGGAGGAGCTGCAGCAGCTTCTTCTTTGGCAGTTTACACTCAAATTTCTCAAGATGTGTTCTGGGCTCCTCTTCACCTTCCTCCTCCATCTTATTAA | 855 | 55.09 | MANPWWGGIGNLSIRGVDSLSSFDLKNPQEQDHEQRQHRQIGSSSDNPDSNTRQEEHDIKNEDRHGAKNTRRPRGRPPGSKNKPKPPIVLTKATPNALQSHVFEIAAATDIAHSISTFANRRRRGVSILSATGLVANVTLRQPAGAVITLHERFEILSLSGAFLPPPSPQGATGLTVYLAGGQGRVVGGMVAGPFVAAGPVIVIAASFTNAIYERLPIEEDDQKENANEEMKMEKQEEDHSNGNNSVAGESSAGGAAAASSLAVYTQISQDVFWAPLHLPPPSY | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 46379978 | 46380832 | + | Lag0030324.1 | Lac8g2937 | 618771 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac8g2937 | 284 | CDD | DUF296 | 101 | 208 | IPR005175 | - | |
Lac8g2937 | 284 | Coils | Coil | 219 | 239 | - | - | |
Lac8g2937 | 284 | MobiDBLite | consensus disorder prediction | 219 | 252 | - | - | |
Lac8g2937 | 284 | PIRSF | ESCAROLA | 13 | 275 | IPR014476 | GO:0003680(InterPro) | |
Lac8g2937 | 284 | ProSiteProfiles | PPC domain profile profile. | 95 | 229 | IPR005175 | - | |
Lac8g2937 | 284 | MobiDBLite | consensus disorder prediction | 50 | 69 | - | - | |
Lac8g2937 | 284 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 96 | 224 | - | - | |
Lac8g2937 | 284 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 35 | 251 | IPR014476 | GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Lac8g2937 | 284 | MobiDBLite | consensus disorder prediction | 219 | 241 | - | - | |
Lac8g2937 | 284 | MobiDBLite | consensus disorder prediction | 23 | 90 | - | - | |
Lac8g2937 | 284 | FunFam | AT-hook motif nuclear-localized protein | 98 | 224 | - | - | |
Lac8g2937 | 284 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 100 | 209 | IPR005175 | - | |
Lac8g2937 | 284 | Gene3D | - | 99 | 237 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac7g0635 | Lac-Chr7:5083327 | Lac8g2937 | Lac-Chr8:46379978 | 3.40E-57 | dispersed | |
Lac8g2937 | Lac-Chr8:46379978 | Lac13g1008 | Lac-Chr13:8513065 | 7.30E-57 | transposed |
Pathway information
