Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2982 ATGGGTCGGTGCAATGAGAAACTTGTGGCCTTTTTGAACAATCGCTGGCTGGTTTTTGTGGCTGCAATATGGGTTCAGTCTTGCGCTGGAATTGGGTATCTTTTCGGGAGCATATCGCCGGTCATCAAGACGAATTTGAGTTACAACCAGAGGCAAATTGCCCGGCTCGGTGTCGCCAAGGACCTTGGCGACAGCGTCGGCGTTTTGGCCGGAACTTTGTCGGAGATATTGCCCTTTTGGGGAACTCTGTTGGTCGGTGCTCTCAATAATTTTGTTGGGTATGGTTGGCTTTGGCTCATCGTCTCTGGGCGAGCTCCGGTTTTGCCTCTCTGGGCCATGTGCGTTCTTGTATTTGTGGGAACGAATGGGGAGACTTACTTCAATACAGTTTCTCTGGTTTCTTGTGTACAAAACTTTCCGAAAAGCAGGGGTCCGGTGGTCGGGATTCTGAAAGGCTTTGCTGGTTTAAGTGGTGCAATTTTGACTCAGATATATGCAATCATGCATTCTCCTGATTCAGCCAATCTTATATTCATGATAGCAGTAGGTCCTGCAATGGTGGCTATTGGTATGATGTTTTTTATCAGACCTGTCGCGGGTCATCGACAAATAAGACCGTCGGATGGCATGAGCTTTACTAGTGTTTATGGTGTCTGCCTCCTTTTGGCTGCATACTTGATGGGAGTCATGCTTATTGAGGATCTTGTTACCTTGAACCCCACTGTGATAGCCATTTTTACTGCAGTCATGTTTGTCATTCTTCTTACTCCCTTTTTGATTCCTGTTACATTGACTCTTAGCTCGGAGACGACAACATTTCCTGAGCAAGAAGCTCTCCTACAACAGTCACCGAAACAGGAACCTGCCAGATCTGAACCAGATGGGAATGAAGTGATATTTAGTGAGGTCGAAGACGAAAAATCCGAGGGAGAGGACTTACTTCCTGTATTAGAGAGACAAAAGCGCATTGCTCAGTTGCAAGCAAGACTATTGCAAGCAGCTGCAGAAGGAGCAGTAAGAGTGAAGAGGAGGAAGGGTCCACGTAGAGGGGAAGATTTCACTTTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGCTTATCTTTTTCTCCCTTCTCCTTGGTTCTGGAACTGGATTGACCGTGATCGATAACCTCGGACAGATGAGCCAGTCTTTAGGTTACGATAACACGCATATTTTTGTATCCATGATAAGCATATGGAACTTTCTCGGCCGTGTCGGTGGCGGATACTTCTCCGAGATCATTGTGAGAGATTATGCTTATCCAAGGCCCATTGCAATGGCGACTGCGCAATTCCTTATGATATTTGGACATGTCTTCATCGGTATGGGATGGCCTGGAGCAATGTATATCGGTACTCTGATAACGGGGCTCGGGTACGGGGCTCACTGGGCTATCGTGCCTGCTACCGCCTCTGAATTGTTTGGTTTGAAAAAGTTTGGGGCTTTGTACAACTTCCTGACCCTCTCAAATCCTATGGGATCTCTGATATTTTCTGGCTTGATAGCGAGCAGTATATACGATAGCGAAGCAGAGAAGCAAGCTCATAATCATAATCATCTCTCACAGCTGCAGAGCTCCTCATCAATTTGGTTCAGCAGCTGGCTTTACGCCGCCGAGGGACCGCACAAGCATGTTAAGTTTGATTTTGGTGTATCGGACGAAGAGTGTGTACTACAATCTCTATGGAAAATCTCGTACATCGACGCTTTCGTAGATCGGTTTCATCCGTCGTGCTACTGCTACTACTGCTACCCTATCATGTTTGTTATTTTCGGATCGAGTGAAATTTTTGCTCGGATGGCATTGCAAGGTCGACACAAGAACTATAATTGCTTCAGTCCCTCCAGTTACAATTCACTCTCTTTTGGTATAAAAGCGTTTTCCTGTGTGTTGCAGACTGCAGTCAGGTGGAAGAAGAACAGACATTTTCATGTGCCACCAAAATAA 1971 46.07 MGRCNEKLVAFLNNRWLVFVAAIWVQSCAGIGYLFGSISPVIKTNLSYNQRQIARLGVAKDLGDSVGVLAGTLSEILPFWGTLLVGALNNFVGYGWLWLIVSGRAPVLPLWAMCVLVFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHSPDSANLIFMIAVGPAMVAIGMMFFIRPVAGHRQIRPSDGMSFTSVYGVCLLLAAYLMGVMLIEDLVTLNPTVIAIFTAVMFVILLTPFLIPVTLTLSSETTTFPEQEALLQQSPKQEPARSEPDGNEVIFSEVEDEKSEGEDLLPVLERQKRIAQLQARLLQAAAEGAVRVKRRKGPRRGEDFTLGQALIKADFWLIFFSLLLGSGTGLTVIDNLGQMSQSLGYDNTHIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPIAMATAQFLMIFGHVFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFGALYNFLTLSNPMGSLIFSGLIASSIYDSEAEKQAHNHNHLSQLQSSSSIWFSSWLYAAEGPHKHVKFDFGVSDEECVLQSLWKISYIDAFVDRFHPSCYCYYCYPIMFVIFGSSEIFARMALQGRHKNYNCFSPSSYNSLSFGIKAFSCVLQTAVRWKKNRHFHVPPK 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 46686858 46689649 - Lag0030369.1 Lac8g2982 618816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2982 656 Pfam Nodulin-like 15 262 IPR010658 -
Lac8g2982 656 Gene3D MFS general substrate transporter like domains 358 545 IPR036259 -
Lac8g2982 656 CDD MFS_Mch1p_like 15 520 - -
Lac8g2982 656 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 606 - GO:0016020(PANTHER)
Lac8g2982 656 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Lac8g2982 656 MobiDBLite consensus disorder prediction 277 296 - -
Lac8g2982 656 SUPERFAMILY MFS general substrate transporter 10 203 IPR036259 -
Lac8g2982 656 SUPERFAMILY MFS general substrate transporter 212 516 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0629 Lac-Chr11:6421156 Lac8g2982 Lac-Chr8:46686858 6.20E-87 dispersed
Lac4g1330 Lac-Chr4:31455159 Lac8g2982 Lac-Chr8:46686858 5.60E-53 dispersed
Lac8g2375 Lac-Chr8:41858954 Lac8g2982 Lac-Chr8:46686858 1.20E-75 dispersed
Lac8g2982 Lac-Chr8:46686858 Lac9g1811 Lac-Chr9:37862325 8.60E-77 dispersed
Lac8g2982 Lac-Chr8:46686858 Lac10g2988 Lac-Chr10:44461487 8.90E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2982 - - - 0.0