Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g3091 ATGGATCAAGTAGATCAAATTGAGGAAGGAAGCTCCAGATTGTTGGGGGGCCATAGCGTTGCTGGGAGCAGTAATGATTACAGGTGGGTTGATGGCAGTGAAGTGGACTCCGAGTCGCCTCCATGGTCACTCTTAGAAGAAAGAGAAAGCGGGGAAGGATATGGATCTGTGAGGAGGAGGTTAGTTAAGAAGCCCAAGAGAGTCGATTCTTTTGACGTTGAAGCAATGGAGATTGCTGACACTAACTATCATCATTTAAAGGATGTTTCCACGTGGCAAACTCTTGCTATAGCATTTCAAACGCTTGGTGTTGTATATGGTGACATGGGTACAAGCCCATTATACGTCTTTGCTGATGTATTCAGCAAGGTGCATATTGAGGCAGATGTTGACGTCCTGGGGGCTCTATCCTTAGTGATTTACACAATTGCTCTTATTCCTTTGGCAAAATATGTTTTTGTAGTTCTCAGAGCCAACGACAATGGTGAAGGAGGAACATTTGCATTGTATTCACTGATCTGTAGGTATGCCAAAGTTAACATGCTGCCAAACCGTCAGCCAGCTGACGAACGTATCTCAAGTTTTAAGCTCAAACTACCCACTCCAGAGTTGGAAAGGGCCTTACACATCAAAGAGACTCTCGAGAAGAGATCATCCTTGAAAACTCTTATATTGTTGCTGGTCCTGATGGGCACTTCAATGATTATTGGGGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCTGTGAGTGGTTTGCAGGGACAGATAAAGTCATTCGATACAAATGCTGTTGTCATTGTTTCAATTATAATCCTTGTGGCCTTGTTCAGCATACAGAAATTTGGGACTGGCAAAGTTGGATTTATGTTTGCTCCTGTGCTTGCTTTGTGGTTTTTTAGTCTGGGATCTATTGGAATTTACAATCTAGTGAAGTATGATCTCACCGTTGTAAGGGCTCTCAATCCCGCTTACATCTATTTATTCTTCAAGAAAAATTCAAATAATGCTTGGTCAGCTCTCGGTGGTTGTGTTTTGTGCGTAACAGGAGCTGAAGCAATGTTTGCTGATCTAGGGCATTTCACTGTGCCAGCCATACAGATTGCCTTCACATGTGTTGTTTTCCCCTGCCTTCTCTTGGCTTACATGGGCCAGGCTGCATACCTTATGAAACATCCAGATGCTGCAGCAAGAATATTTTATGATTCTGTGCCAGCAAGTCTTTTTTGGCCAGTCTTTGTGACAGCAGCACTTGCTGCTATGATTGCGAGCCAAGCAATGATATCTGCAACCTTTTCTTGTGTCAAGCAATCTATGGCTCTTGGATGTTTTCCGAGAATGAAGATAGTTCACACATCTAAGAGACGAATGGGTCAAATTTACATCCCTGTGATCAACTGGTTTTTGATGATAATGTGCATATTTGTCGTTGCTATATTTCAGAGGACTACAGATATTGCCAATGCTTATGGTATTGCTGAAGTTGGTGTGATGCTGGTGAGCACTGTCCTGGTGACTCTAGTAATGCTTCTGATCTGGCAGACAAATTTGTTTCTTGCTTTGTGTTTCCCACTTGTATTTGGGTCAGTGGAATTTATCTACTTATCTGCAGTTTTATCAAAAATCAGCGAGGGTGGGTGGTTGCCACTTGCTTTTGCTTTTATCTTCCTCTCTGTGATGTACACATGGAACTATGGGAGTGTGTTGAAGTATCAAAGTGAGGTGAGAGAGAAGATATCGATTGATTTCTTGCTTGAACTGGGATCTACACTCGGGACTGTAAGAGTTCCAGGAATTGGTCTCCTCTACAATGAGCTTGTCCAAGGCATTCCTGCAATTTTTGGGCAATTTCTTCTTAGCCTTCCAGCCATCCACTCCACAATCGTGTTTGTGTGCATCAAATATGTTCCTATCCCTGTGGTTCCGCAAGAGGAAAGGTTTTTGTTTAGGAGGGTTGGCCCAAAAGATTACCATATGTTTCGTTGCATCGCGAGATATGGTTACAAGGATGTGCGGAAGGAAGATCACCATGCGTTTGAGCAACTTTTGATGGAAAGCCTTGAGAAGTTCTTAAGGAAGGAGGCTCAAGATCTTGCATTGGAGAGCAATTTGAATGAGTTGGAATTTGATAATATTTCAGAGAGGCCGCGGAATTCTCCCACTCTAGGTGTGGTTGATGTGAATGAGCTGAGAATTCCATTGATGGAAGAGGCAAGAACTATGAGTTCAGATGAAGGTTTTGGGGCCCCGTTGCCATCTAGCATTATGGCATCAGATGACGACCCTAGTCTGGAGTATGAGCTATCAGCTCTTCGAGAAGCAATGGATTCAGGATTTACATATCTACTGGCACAAGGAGATGTCCGAGCAAAGAAAAATTCCTTTTTTATTAAGAAGCTTGTTATAAACTATTTCTATGCATTCCTAAGGAGGAACTGTAGGGGTGGTGCAGCGACTATGCGAGTTCCTCACATGAATATCATGCAAGTTGGGATGACTTACATGGTCTAA 2514 42.88 MDQVDQIEEGSSRLLGGHSVAGSSNDYRWVDGSEVDSESPPWSLLEERESGEGYGSVRRRLVKKPKRVDSFDVEAMEIADTNYHHLKDVSTWQTLAIAFQTLGVVYGDMGTSPLYVFADVFSKVHIEADVDVLGALSLVIYTIALIPLAKYVFVVLRANDNGEGGTFALYSLICRYAKVNMLPNRQPADERISSFKLKLPTPELERALHIKETLEKRSSLKTLILLLVLMGTSMIIGDGILTPAISVMSAVSGLQGQIKSFDTNAVVIVSIIILVALFSIQKFGTGKVGFMFAPVLALWFFSLGSIGIYNLVKYDLTVVRALNPAYIYLFFKKNSNNAWSALGGCVLCVTGAEAMFADLGHFTVPAIQIAFTCVVFPCLLLAYMGQAAYLMKHPDAAARIFYDSVPASLFWPVFVTAALAAMIASQAMISATFSCVKQSMALGCFPRMKIVHTSKRRMGQIYIPVINWFLMIMCIFVVAIFQRTTDIANAYGIAEVGVMLVSTVLVTLVMLLIWQTNLFLALCFPLVFGSVEFIYLSAVLSKISEGGWLPLAFAFIFLSVMYTWNYGSVLKYQSEVREKISIDFLLELGSTLGTVRVPGIGLLYNELVQGIPAIFGQFLLSLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVGPKDYHMFRCIARYGYKDVRKEDHHAFEQLLMESLEKFLRKEAQDLALESNLNELEFDNISERPRNSPTLGVVDVNELRIPLMEEARTMSSDEGFGAPLPSSIMASDDDPSLEYELSALREAMDSGFTYLLAQGDVRAKKNSFFIKKLVINYFYAFLRRNCRGGAATMRVPHMNIMQVGMTYMV 837
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 47547278 47558815 - Lag0030478.1 Lac8g3091 618925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g3091 837 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 80 837 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac8g3091 837 MobiDBLite consensus disorder prediction 1 47 - -
Lac8g3091 837 Pfam K+ potassium transporter integral membrane domain 98 586 IPR053951 -
Lac8g3091 837 Pfam K+ potassium transporter C-terminal domain 598 835 IPR053952 -
Lac8g3091 837 NCBIfam potassium uptake protein 97 837 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2705 Lac-Chr5:45521003 Lac8g3091 Lac-Chr8:47547278 2.50E-244 dispersed
Lac7g1530 Lac-Chr7:16960675 Lac8g3091 Lac-Chr8:47547278 2.40E-198 dispersed
Lac8g0351 Lac-Chr8:4304917 Lac8g3091 Lac-Chr8:47547278 1.10E-187 dispersed
Lac8g3091 Lac-Chr8:47547278 Lac8g2602 Lac-Chr8:43649500 6.00E-184 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g3091 K03549 - csv:101202804 1470.29