Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g0114 ATGAAGAGTGGAAAACTAATACTGAAATTGGTTTTTCCGAATACCCAGGGTTGCAAGGAACTTGGAATTTATTATCGAAGGAGGTGGTTGTTGATTGATCAAGGTTATCTTTTGCAACTCATGGCGACCAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAACTCACTAATGCTTACTGTTTGGTTGCAATCGGTGGCTCTGAGAACTTCTACAGTACCTTCGAAGCTGAATTAGGTGGTGTCATTCCGGTTGTTAAAGCATCCATTGATGGCACTCGCATTATTGGCCGCCTATGTGCTGGAAATAAAAATGGGCTCCTTGTACCGCACACCACGACTGACCAAGAACTCCAGCACTTGAGAAACAGCCTACCTGATCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAATACCATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTTGCTGGTAACGTACTCGTGGGAAGCTACTGTAGCTTCACAAATAGGGGTGGCTTGGTTCATCCACATACGTCTATCGAAGATTTGGACGAACTATCGACTCTTCTTCAGGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGCGAAGTGATTGCTGCTGGATTGACAGCAAATGACTGGACTGCATTTTGTGGTTCGGACACCACTGCCACAGAACTATCAGTAATTGAAAGCGTTTTCAAATTGAGAGAGGCTCAACCAAGTTCCATTGTTGACGAGATGAGGAAGTCGCTAATAGACAGTTACGTGTGA 858 44.52 MKSGKLILKLVFPNTQGCKELGIYYRRRWLLIDQGYLLQLMATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFEAELGGVIPVVKASIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1741644 1744439 + Lag0007601.1 Lac9g0114 619040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g0114 285 CDD IF6 42 263 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Lac9g0114 285 NCBIfam translation initiation factor IF-6 44 264 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Lac9g0114 285 SUPERFAMILY Pentein 41 264 - -
Lac9g0114 285 FunFam Eukaryotic translation initiation factor 6 41 265 - -
Lac9g0114 285 SMART eIF6neu2 43 244 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Lac9g0114 285 Hamap Translation initiation factor 6 [eif6]. 30 285 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Lac9g0114 285 Gene3D - 41 265 - -
Lac9g0114 285 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 41 284 IPR002769 GO:0000054(PANTHER)|GO:0000460(PANTHER)|GO:0000470(PANTHER)|GO:0005730(PANTHER)|GO:0005829(PANTHER)|GO:0030687(PANTHER)|GO:0042256(InterPro)|GO:0043022(InterPro)|GO:0043023(PANTHER)|GO:1902626(PANTHER)
Lac9g0114 285 Pfam eIF-6 family 44 243 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g0114 K03264 - csv:101212091 461.07