Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g0210 ATGGACGGGCAGACCTCGATCTCCAATGGCACAGACGATACAATCGTCTGTTATGCGCCAACGATGATCACGACAAATGGGGTGTGGCAAGGTGACAACCCTTTGGATTATTCTCTCCCTCTCTTTATCTTGCAGTTAACAATGGTGGTTGTGATGACTCGCGCTTTGGTTTACCTCTTAAAACCCTTTCGTCAACCTCGAGTCATCTCCGAAATTTTGGGTGGAGTGATTTTGGGGCCTTCAGTACTGGGGAGGAATGCTAAATTTGCCAACACTGTATTTCCTTTAAGAAGTGTAATGGTGCTTGAAACAATGGCAAACGTAGGGCTTCTCTACTTTCTATTCTTGGTTGGTGTGGAGATGGATCTCTCAGTAATTCGTCGAACTGGGAAGAAGGCAATGGCAATAGCTGTAGCAGGAATGATTCTTCCATTTGGAATAGGAGCTGCTTTTTCATTCCAGCTGCACAAGACTGGTGATCAAATCAACCAGAGCACTTACATTATGTTTCTTGGTATTGCGCTCTCTGTGACTGCTTTCCCAGTGCTTGCTAGAATTCTTGCAGAGCTTAAACTGATAAATTCAGAGCTTGGAAGGATGGCTATGGCTTCTGCTCTTTTTAATGATATGTGTGCTTGGGTTCTCTTAGCTTTAGCCATAGCCTTATCCGAGAATGATTCCTCATCTTTGGCTTCTTTATGGGTTGTATTGTCAAGTGCAAGCTTTGTTTTGTTTTGCATCTTCATCATTAGACCCATGATCTCGTGGATGATTCGAAGAACCCCGGAAGGAGAAAGTATCAGTGAGTTCTACATTTGTTTGATCCTCACAGGGGTTATGATCTCAGGGTTTGTTACAGATGCCATAGGGACACACTCGGTTTTTGGGGCATTTGTGTTTGGGTTGGTTATCCCAAATGGATCGCTTGGGGTGGCTTTGATTGAGAAACTTGAGGATTTTGTTTCAGGACTTTTGCTTCCTCTCTTCTTCGCAATAAGTGGGCTAAAGACTAATGTGGCTACCATAGACGGAATGCTATCTTGGATATCTATTTTATTTATCACTTTCCTTGCTTTTATTGGAAAAATCCTTGGAACTCTCCTTGCCGCCATTTGTTATCAGATGTCCTATCGCGAAGGCGTCACATTAGGCTTTCTTATGAACACCAAAGGTCTTATTGAAATGATCATCCTCAATGTCGGAAAGGACCAAAAGGTGTTAGATGATCAAACATTCACAGTTATGGTGATTGTGGCCCTCGTTATGACAGGGATAATAACACCTGCAGTCACCATAATCTATAGGCCAACAAGAAGGTTTCTACCATATAAGAAACGAACAATCCAAGCATCAAAACCAGATTCAGAGTTCAGAGTATTAGTTTGCATCCACACACCTCGAAATGTGCCAACAATCATCAACCTCCTTGATGCATCCCACCCGACCAAAAGATCTCCCATTTGCATTTATGTTTTACACTTGGTCGAACTCACAGGTCGAGCCTCCGCCATGCTCATTGTCCACAACACCAGAAAATCTGGCCGTCCTGCCCTGAATAGAACCCAAGCTCAATCAGATCACATCATCAATGCATTCGAGAACTACGAACAACACGTGGATTGTGTCTCTGTACAGCCTCTCACCGCCATTTCCCCCTACTCCACAATGCACGAAGACATCTGCAATTTAGCAGAGGACAAACGCGTTGCCTTCATAATCATCCCATTCCACAAGCAACAAACAGTCGATGGAGGAATGGAAGCCACAAATCCAGCATTTAGAATGGTCAACCAAAATGTGCTAGCCAATGCCCCTTGCTCTGTTGGAATCCTAGTCGATCGAGGTCTAAATGGCTCAAATCGAGCCGCATCCAACAAGGCATCTCACTATAACATAATCGTGCTGTTCTTCGGCGGACAAGACGACAGAGAAGCTCTATCATACGCATGGAGAATGTCAGAAAATCCAGGAGTGAGCTTAACCGTAATGCGATTCATCGCCGCAAAAGAAGTACTAGAACCAAAACCCGAAGCAAATGGACAAGGAGCTTCACCAATGGAAATAGAAATCGACAGAGAGAGGCAACTCGACGAAGAATACATAAATGAGTTTAGAGCAAAGAATGAAAACACGGAGTCAATTACTTACACAGAGAGAATCTTGAACAACGGCGAGGAGACAGTGGCGGCCATAAGATCGATGGACGATGCTCACGACCTGTTCATCGTGGGTAGAGGAGAAGCTCAGGTATCATCTCTCACCGCCGGGATGACAGACTGGAGCGAATGTCCAGAGCTCGGAGCAATCGGCGATCTGTTAGCTTCATCGGATTTTGCAGCGACGGCTTCAGTTTTGGTAGTGCAACAATTCGGAGCAGCAATGGCGGCTGAGCATGGAGAAGAAGAAGAAGAAAGTTCACCACGCAACCATGATCTAGGTGATCCCTACCAAGGCTTAAGATCCATGAACTTGAGGCAACATACTCCAACAAGAACTCAAATTATGTACAATACACAACATATTTAG 2526 44.5 MDGQTSISNGTDDTIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTMVVVMTRALVYLLKPFRQPRVISEILGGVILGPSVLGRNAKFANTVFPLRSVMVLETMANVGLLYFLFLVGVEMDLSVIRRTGKKAMAIAVAGMILPFGIGAAFSFQLHKTGDQINQSTYIMFLGIALSVTAFPVLARILAELKLINSELGRMAMASALFNDMCAWVLLALAIALSENDSSSLASLWVVLSSASFVLFCIFIIRPMISWMIRRTPEGESISEFYICLILTGVMISGFVTDAIGTHSVFGAFVFGLVIPNGSLGVALIEKLEDFVSGLLLPLFFAISGLKTNVATIDGMLSWISILFITFLAFIGKILGTLLAAICYQMSYREGVTLGFLMNTKGLIEMIILNVGKDQKVLDDQTFTVMVIVALVMTGIITPAVTIIYRPTRRFLPYKKRTIQASKPDSEFRVLVCIHTPRNVPTIINLLDASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHVDCVSVQPLTAISPYSTMHEDICNLAEDKRVAFIIIPFHKQQTVDGGMEATNPAFRMVNQNVLANAPCSVGILVDRGLNGSNRAASNKASHYNIIVLFFGGQDDREALSYAWRMSENPGVSLTVMRFIAAKEVLEPKPEANGQGASPMEIEIDRERQLDEEYINEFRAKNENTESITYTERILNNGEETVAAIRSMDDAHDLFIVGRGEAQVSSLTAGMTDWSECPELGAIGDLLASSDFAATASVLVVQQFGAAMAAEHGEEEEESSPRNHDLGDPYQGLRSMNLRQHTPTRTQIMYNTQHI 841
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3239579 3242487 + Lag0007697.1 Lac9g0210 619136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g0210 841 PANTHER CATION/H + ANTIPORTER 17 795 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Lac9g0210 841 Gene3D - 478 764 - -
Lac9g0210 841 MobiDBLite consensus disorder prediction 796 817 - -
Lac9g0210 841 Pfam Sodium/hydrogen exchanger family 53 431 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Lac9g0210 841 Gene3D - 41 439 IPR038770 -
Lac9g0210 841 FunFam Cation/H(+) antiporter 15 41 441 - -
Lac9g0210 841 MobiDBLite consensus disorder prediction 796 810 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2360 Lac-Chr11:39794310 Lac9g0210 Lac-Chr9:3239579 7.00E-94 dispersed
Lac13g1203 Lac-Chr13:10707807 Lac9g0210 Lac-Chr9:3239579 5.50E-130 dispersed
Lac1g0444 Lac-Chr1:9773591 Lac9g0210 Lac-Chr9:3239579 1.20E-198 dispersed
Lac4g2643 Lac-Chr4:45419195 Lac9g0210 Lac-Chr9:3239579 3.70E-90 dispersed
Lac5g2192 Lac-Chr5:40523238 Lac9g0210 Lac-Chr9:3239579 1.70E-204 dispersed
Lac5g2193 Lac-Chr5:40534211 Lac9g0210 Lac-Chr9:3239579 8.10E-202 dispersed
Lac7g2886 Lac-Chr7:47963075 Lac9g0210 Lac-Chr9:3239579 4.70E-69 dispersed
Lac8g0082 Lac-Chr8:1154807 Lac9g0210 Lac-Chr9:3239579 4.70E-138 dispersed
Lac8g0083 Lac-Chr8:1162010 Lac9g0210 Lac-Chr9:3239579 1.70E-135 dispersed
Lac8g2079 Lac-Chr8:39286898 Lac9g0210 Lac-Chr9:3239579 9.30E-126 dispersed
Lac8g2081 Lac-Chr8:39298083 Lac9g0210 Lac-Chr9:3239579 1.30E-114 dispersed
Lac9g0210 Lac-Chr9:3239579 Lac9g2349 Lac-Chr9:42755250 8.40E-101 dispersed
Lac9g0210 Lac-Chr9:3239579 Lac7g2881 Lac-Chr7:47919347 1.70E-125 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g0210 K26731 - csv:101219265 1466.83