Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g0267 ATGTACTTGTTTCAGGGGGAGCCAATCCTTCTTTTGGCAATGCAGAAGTTAGAGGGTCCAGCCAATTGTGGTTCCCATTGGTTCTTCCTAAGTCGATCGTTTCTTGAATTTTGTGTTCTCGGGTGGGATAACCTTCCTCGGACACTTCTTATCCCTCTTTCGCCGTATTCGCCAGTCAGTAATGTTCTTCCTCTTGTTGTTGTTATTGAAGTCACCATGGCCAAGGAGGCAAGAGAATTTGGTTTTGAATTCTATGAAAGGACTCAAACAAGCATTTCATTGCGAGAGTTCGACCCGGCCTCTGCCAAAATAGTTGAAAGATCATATCAACTACTAGATATTTTGGAATTTAATAGCACAAGAAAGAGGATGTTTGTGATTGTAAGAAATGAAAAGGAACAGCTACTACTACTTTGTAAAGGAGCTGACAGTGTTATGTTTGAAAGACTGGCAAAGAATGGAAGTGAGTTTGAAGAACAAACAAAGGTGCACATTAATGAGTACGCCGATGCTGGTTTAAGAACTTTAGTGCTAGCGTATCGTGAGCTGATGGAGGAGGAATTCAATACATTTCTTCAAGAATTCATCAAAGCCAAAAACACAGTGAGCACAGATCACGATGACATAATCGGCCAGTTAATAGAAAGTGTTAAGAAAGATTTGATTCTTCTTGGTGCTACATCAGTTGAAGATAAGCTCCAAAATGGGGTTGGAATTAAACTATGGGTTCTAACTGGAGATAAAATGGAAACAACCATCAACATTGGCTTTGCTTGTAGTTTACTTAGACAAGGAATGAGGCAAATAATTATCAGCTCAGAGACTCCGAAAGGAAAAGCTTTAGACAAAGTCGAAGACATTCACAAATTTGCAGCTATCAAGGCGTTTAAGGCAAGTGTAACTCAGCAAATAAGTGATGCAAAAGCATTACTTGCAACTTCGAGCGAAACCCCGGAAGCATGGGCTTTGATCATTGATGGAAAATCCCTCACCTATACTCTGGAGGATGATGTGAATGACCTATTTCTGGAGTTTGTCATTGGTTGTGCTTCAGTTATATGCTGCAGATCATCTCCAAAACAGAAAGCACGAGTTACCCAATTGGTTAAGGTTAAAACAGGCAGCACCACCCAGTTGGTGATGGTGCAAATGATGTTGGAATGCTCCAAGAAGCGGATATCGGGATTGGTATTAGTAGTCATGTCAAGTGACATTGCAATAGCACAGTTTCGATATTTGGAGCGATTCCTTCTTGTGCATGGACATTGGTGTTACAAAGGATCTCTTCCATGGTAA 1296 40.74 MYLFQGEPILLLAMQKLEGPANCGSHWFFLSRSFLEFCVLGWDNLPRTLLIPLSPYSPVSNVLPLVVVIEVTMAKEAREFGFEFYERTQTSISLREFDPASAKIVERSYQLLDILEFNSTRKRMFVIVRNEKEQLLLLCKGADSVMFERLAKNGSEFEEQTKVHINEYADAGLRTLVLAYRELMEEEFNTFLQEFIKAKNTVSTDHDDIIGQLIESVKKDLILLGATSVEDKLQNGVGIKLWVLTGDKMETTINIGFACSLLRQGMRQIIISSETPKGKALDKVEDIHKFAAIKAFKASVTQQISDAKALLATSSETPEAWALIIDGKSLTYTLEDDVNDLFLEFVIGCASVICCRSSPKQKARVTQLVKVKTGSTTQLVMVQMMLECSKKRISGLVLVVMSSDIAIAQFRYLERFLLVHGHWCYKGSLPW 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4319043 4323028 + Lag0007754.1 Lac9g0267 619193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g0267 431 SUPERFAMILY HAD-like 164 372 IPR036412 -
Lac9g0267 431 Gene3D - 223 385 IPR023214 -
Lac9g0267 431 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 95 187 IPR023299 GO:0000166(InterPro)
Lac9g0267 431 Pfam Cation transport ATPase (P-type) 102 150 - -
Lac9g0267 431 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 76 426 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Lac9g0267 431 Gene3D - 88 222 IPR023299 GO:0000166(InterPro)
Lac9g0267 431 Pfam Phospholipid-translocating P-type ATPase C-terminal 400 426 IPR032630 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g2196 Lac-Chr2:28434690 Lac9g0267 Lac-Chr9:4319043 8.60E-54 dispersed
Lac8g2267 Lac-Chr8:40900203 Lac9g0267 Lac-Chr9:4319043 3.80E-46 dispersed
Lac8g1560 Lac-Chr8:33276715 Lac9g0267 Lac-Chr9:4319043 4.60E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g0267 K01530 - csv:101205650 537.724