Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g0310 ATGGAAGAGAAAAGAAAAGCTTTGTTGGCAGTGATTCTGATTCAAACCATTTACGCCGCCATGTTCTTACTCTCTAAGGCCGCATTTGACGGCGGAATGAACAACTTCATCTTTGTTTTCTATCGCCAGGCCACAGCCACCATCTTCCTTTCTCCCATAGCCTTCTTTTTCGAATGGAAAACTGCCCCACCCTTGACATTCCTCACCTTCTGCAAGATCTTTATGCTTTCTTTATTTGGAATAGCCATATCCTTAAATCTTTATGGGATTGCTCTTGTTTACACGTCAGCAACGTTGGCTGCAGCAACTACCAATTGTCTTCCTGTCATCACCTTCTTCGTCGCCCTCTCACTCAGGATGGAAGTGTTGAGGTTAAAGTCAATAGCAGGAATTGCAAAGCTAGCAGGAATAGTTTTGTGCATTGGTGGTGTAGGGATGTTAGCATTTTACAAAGGCCCTCAACTGAACTTGTTTAACAATCATCATCTCTTTTCTGCCCATAACACTCATTCCCACCATTCTTCTAATGTTGCTTCACCCAACTCTTGGTTGAAGGGCTGCTTTTTGATGCTTGCTTCCAATTCCTTATGGGGCATTTGGATTGTTCTTCAGGCATTCGTATTGAAAAGCTATCCATCGAAGCTTCTGTTAACAAATCTGCAGTGTTTGTTAAGTTCATTTCAATCCTTTGCTATTGCTATTGCAATGGAGAGAGATCCTCAGCAATGGAAACTTGGCTGGAATGTCAGGCTTCTGGCCGTCGCATACTGTGGCGTGGTGGTGACGGCTGTGACATATTACCTTCAAGCATGGGTGATTGAAAAGAAAGGGCCAGTTTATCTAGCCATGTCCACACCGCTCTCTCTTATCATTACAATTTTCCTTTCTGCTATCTTTCTTGGAGACACTATCACTCTTGGAAGTACTTTGGGGGGAGTTTTATTGGTTGGAGGGCTGTATTTTGTGCTGTGGGGAAAGAGCAAAGAGCAGAAAATAACTGAAGGATTGAAAGAAGGTGGCACAGAATGCAACATGCAACAGAAGGAGACCACAAAATTAGGAAATGAAGATCCAGTGGAAAATGTCTGA 1089 43.07 MEEKRKALLAVILIQTIYAAMFLLSKAAFDGGMNNFIFVFYRQATATIFLSPIAFFFEWKTAPPLTFLTFCKIFMLSLFGIAISLNLYGIALVYTSATLAAATTNCLPVITFFVALSLRMEVLRLKSIAGIAKLAGIVLCIGGVGMLAFYKGPQLNLFNNHHLFSAHNTHSHHSSNVASPNSWLKGCFLMLASNSLWGIWIVLQAFVLKSYPSKLLLTNLQCLLSSFQSFAIAIAMERDPQQWKLGWNVRLLAVAYCGVVVTAVTYYLQAWVIEKKGPVYLAMSTPLSLIITIFLSAIFLGDTITLGSTLGGVLLVGGLYFVLWGKSKEQKITEGLKEGGTECNMQQKETTKLGNEDPVENV 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4958882 4964964 - Lag0007797.1 Lac9g0310 619236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g0310 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 151 - -
Lac9g0310 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 328 - -
Lac9g0310 362 MobiDBLite consensus disorder prediction 343 362 - -
Lac9g0310 362 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020(InterPro)
Lac9g0310 362 Pfam EamA-like transporter family 6 144 IPR000620 GO:0016020(InterPro)
Lac9g0310 362 PANTHER WAT1-RELATED PROTEIN 10 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2414 Lac-Chr1:45537259 Lac9g0310 Lac-Chr9:4958882 3.50E-90 dispersed
Lac6g2427 Lac-Chr6:42024535 Lac9g0310 Lac-Chr9:4958882 2.60E-54 dispersed
Lac8g1680 Lac-Chr8:34915837 Lac9g0310 Lac-Chr9:4958882 1.70E-85 dispersed
Lac8g2609 Lac-Chr8:43701185 Lac9g0310 Lac-Chr9:4958882 1.60E-43 dispersed
Lac9g0302 Lac-Chr9:4722652 Lac9g0310 Lac-Chr9:4958882 1.40E-38 dispersed
Lac9g0305 Lac-Chr9:4819882 Lac9g0310 Lac-Chr9:4958882 1.20E-68 dispersed
Lac9g0307 Lac-Chr9:4849982 Lac9g0310 Lac-Chr9:4958882 9.50E-25 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g0310 - - - 0.0