Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g0319 ATGCTCAAGAATGATTGGGGTGCCACAAACTATCCTATAGTCCCAGGGCATGAGATTGCTGGAGTTGTGACTTCTGTTGGTAAAAACGTGACGAAATTCAAAGCGGGGGACGAAGTCGGGGTCGGTGTCATGGTTGGATCTTGTAGAAATTGTGAAAATTGTGAACAAGACTTGGAGAGTTACTGTCCCAAGATGATATATACTTACAATTTTCCCGGAGTCGATGGATCGAATAATTACGGTGGTTACTCCGATACGATCGTCGTCGATCAACATTTTGTTGTCAGATTTCCTGACAACTTACCTCTTCATGCTGGGGCTCCCCTTCTTTGTGCTGGAATTACAGTTTATAGCCCAATGAAATATTTTGGAATGACTGAACCTGGTAAGCATTTGGGTGTGGCTGGACTTGGTGGCCTTGGCCATGTTGCTGTTAAGCTTGCCAAGGTATTTGGCTTGAAAGTTACTGTCATCAGTACCTCTCTCAGGAAGAAAGAGGAAGCAATCCACCAGCTCGGTGCCGATGCGTTCATTGTTTCGAGTGATCTCGCAGAAATGAAGGCTGCCGTGGGAACTTTGGATTACATTGTGGACACAATTTCCGCTGTTCATTCCCTTGATTCATTGATTAGTCTGCTCAAGTTCAATGGAAAACTGATCGCGGTCGGTTTACCTAACAAGCCAGTTGACGTATCGCTCGGGATTCTCGTTTCTGGTAGGAAGCTCATTGCTGGAAGCAACTTTGGAGGACCAAAAGAGACACAGGAGATGTTGGATTTCTGTGGAAAGCACAACATTACAGCAGATATTGAGCTCATTAAGATGGATGACATTAACTCGGCCATCGAAAGGCTTGCGAAAGCTGATGTGAAGTATCGGTTCGTGATCGACGTCGAAAACTCTTTCAAATAG 912 44.96 MLKNDWGATNYPIVPGHEIAGVVTSVGKNVTKFKAGDEVGVGVMVGSCRNCENCEQDLESYCPKMIYTYNFPGVDGSNNYGGYSDTIVVDQHFVVRFPDNLPLHAGAPLLCAGITVYSPMKYFGMTEPGKHLGVAGLGGLGHVAVKLAKVFGLKVTVISTSLRKKEEAIHQLGADAFIVSSDLAEMKAAVGTLDYIVDTISAVHSLDSLISLLKFNGKLIAVGLPNKPVDVSLGILVSGRKLIAGSNFGGPKETQEMLDFCGKHNITADIELIKMDDINSAIERLAKADVKYRFVIDVENSFK 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5156493 5158075 - Lag0007806.1 Lac9g0319 619245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g0319 303 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 266 IPR036291 -
Lac9g0319 303 SMART PKS_ER_names_mod 4 296 IPR020843 GO:0016491(InterPro)
Lac9g0319 303 FunFam Cinnamyl alcohol dehydrogenase 112 268 - -
Lac9g0319 303 CDD CAD1 1 297 IPR047109 GO:0016616(InterPro)
Lac9g0319 303 SUPERFAMILY GroES-like 2 130 IPR011032 -
Lac9g0319 303 Gene3D - 1 298 - -
Lac9g0319 303 Pfam Zinc-binding dehydrogenase 139 261 IPR013149 -
Lac9g0319 303 Gene3D - 112 268 - -
Lac9g0319 303 PANTHER ALDEHYDE REDUCTASE 1 301 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Lac9g0319 303 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 16 30 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Lac9g0319 303 Pfam Alcohol dehydrogenase GroES-like domain 4 99 IPR013154 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3297 Lac-Chr1:52753072 Lac9g0319 Lac-Chr9:5156493 1.60E-07 dispersed
Lac1g3298 Lac-Chr1:52755898 Lac9g0319 Lac-Chr9:5156493 3.00E-06 dispersed
Lac9g0319 Lac-Chr9:5156493 Lac9g0322 Lac-Chr9:5203641 1.80E-138 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g0319 K00083 - csv:101205228 506.138