Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g0322 ATGCAAGAGATGGTTGTCGACGCGGCGGATGAAGGTCGTTGGCACGGCGGAGATGGTTCGTCTGCGTGGGGTGTGGAATGCTCTCAAGGGTTTCTACTTTTGGAGGAAGAAGATGGACGGGTGGGCTGCTGCATGAAGGCTATTCTGGTGGTGAGGGTGGGCGGTGACATGACGTTTTTACCCATTGTATTTACGGGGGAGAAACGACCGAACATGCAAGAGATGGTTGTCGACGCGGCGGATGAAGGTCGTTGGCACGGCGGAGATGGTTCGTCGACGTGGTGTGAGAGACGTCGTTTACGTCATTTCCGAGGACATAGATGTGTTTTGCAGTATTTAATTGCAATTATTCATTCTGGTGGTGAGGGTGGGCGGGAAAATGGTGAGGATGATGTCAGCATCAAAGTCCTTTACTGTGGGGTTTGCCATTCTGATCTGCACTTGCTCAAGAATGATTGGGGTGTCACAAGTTATCCAATAGTCCCAGGGCATGAGATTGTTGGTGTAGTAACTTCTGTTGGGAATAATGTGAAGAAATTCAAAGCGGGCGACCAAGTTGGAGTCGGTGTCATAGTTGGATCTTGCAAAAGTTGTGAAAATTGTGAACAGGACTTGGAGAATTACTGCCCCAAGATGATATATACTTACAACTCACATTCATATGATGGAGCAAAGACTTACGGTGGTTATTCCGATAAGATCGTCGTCGATCAGCGTTTCGTGCTTCGATTTCCCGAAAACTTACCCCTTGATGCTGGAGCTCCACTTCTATGCGCTGGAATCACAATTTATAGCCCTATGAAATACTATGGAATGACTGAATCTGGTAAGCATTTGGGTGTGGTTGGACTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGCAAGGCATTTGGCTTGAAAGTTACTGTCATCAGTACCTCTCCAAGAAAGAAGGAGGAAGCTATCGATAGGCTCGGTGCCGACGCATTCCTTGTTTCGAGTGATCCTGCACAATTGAAGGCTTCCATGGGGACAATGGATTACATCATTGACACGGTATCAGCTATCCATGCTCTGGCTCCATTGCTTGGTCTGCTAAAACTCAATGGAAAGTTGGTCACTGTGGGTTTACCTAACAAGCCACTCGATCTGCCAATTGCTTCTCTAGTTATCGGTAGGAAGATGGTTGGTGGAAGCAACTTTGGAGGGCTGAAAGAGACACAAGAGATGTTGGATTTCTGTGCTAAACACAACATCACAGCAGAGATTGAGCTCATTCAGATGGACGACATTAACACGGCCATCGAAAGGCTTGCGAAAGCGGATGTTCGATATCGGTTTGTGATCGACATTGGAAACTCCTTGAAATAG 1353 47.08 MQEMVVDAADEGRWHGGDGSSAWGVECSQGFLLLEEEDGRVGCCMKAILVVRVGGDMTFLPIVFTGEKRPNMQEMVVDAADEGRWHGGDGSSTWCERRRLRHFRGHRCVLQYLIAIIHSGGEGGRENGEDDVSIKVLYCGVCHSDLHLLKNDWGVTSYPIVPGHEIVGVVTSVGNNVKKFKAGDQVGVGVIVGSCKSCENCEQDLENYCPKMIYTYNSHSYDGAKTYGGYSDKIVVDQRFVLRFPENLPLDAGAPLLCAGITIYSPMKYYGMTESGKHLGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFLVSSDPAQLKASMGTMDYIIDTVSAIHALAPLLGLLKLNGKLVTVGLPNKPLDLPIASLVIGRKMVGGSNFGGLKETQEMLDFCAKHNITAEIELIQMDDINTAIERLAKADVRYRFVIDIGNSLK 450
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 5203641 5207092 + Lag0007809.1 Lac9g0322 619248
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac9g0322 450 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 248 413 IPR036291 -
Lac9g0322 450 CDD CAD1 130 444 IPR047109 GO:0016616(InterPro)
Lac9g0322 450 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 163 177 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Lac9g0322 450 Gene3D - 125 445 - -
Lac9g0322 450 Pfam Alcohol dehydrogenase GroES-like domain 128 245 IPR013154 -
Lac9g0322 450 Gene3D - 259 415 - -
Lac9g0322 450 SUPERFAMILY GroES-like 126 277 IPR011032 -
Lac9g0322 450 Pfam Zinc-binding dehydrogenase 286 409 IPR013149 -
Lac9g0322 450 FunFam probable cinnamyl alcohol dehydrogenase 122 267 - -
Lac9g0322 450 FunFam Cinnamyl alcohol dehydrogenase 259 415 - -
Lac9g0322 450 PANTHER ALDEHYDE REDUCTASE 125 448 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Lac9g0322 450 SMART PKS_ER_names_mod 120 443 IPR020843 GO:0016491(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2574 Lac-Chr5:44271303 Lac9g0322 Lac-Chr9:5203641 8.40E-100 dispersed
Lac9g0322 Lac-Chr9:5203641 Lac6g2362 Lac-Chr6:41349760 1.40E-46 dispersed
Lac9g0319 Lac-Chr9:5156493 Lac9g0322 Lac-Chr9:5203641 1.80E-138 proximal
Lac11g1844 Lac-Chr11:33161640 Lac9g0322 Lac-Chr9:5203641 4.50E-96 transposed
Lac1g0041 Lac-Chr1:818356 Lac9g0322 Lac-Chr9:5203641 3.50E-15 transposed
Lac1g1641 Lac-Chr1:37671286 Lac9g0322 Lac-Chr9:5203641 1.30E-47 transposed
Lac1g2761 Lac-Chr1:48760825 Lac9g0322 Lac-Chr9:5203641 1.40E-129 transposed
Lac2g0127 Lac-Chr2:960842 Lac9g0322 Lac-Chr9:5203641 9.70E-115 transposed
Lac2g2801 Lac-Chr2:43756208 Lac9g0322 Lac-Chr9:5203641 1.40E-22 transposed
Lac5g1150 Lac-Chr5:19933018 Lac9g0322 Lac-Chr9:5203641 1.20E-29 wgd
Lac6g1547 Lac-Chr6:20220823 Lac9g0322 Lac-Chr9:5203641 2.30E-18 wgd
Lac7g2193 Lac-Chr7:36087021 Lac9g0322 Lac-Chr9:5203641 1.80E-18 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g0322 K00083 - csv:101206562 548.895