Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac9g0565 | ATGTCATCGTCGAATTCACCATGTGCGGCGTGCAAATTCCTGAGGCGAAAATGCACACAAGAATGCGTGTTCGCTCCTTATTTCCCACCGGATCAGCCACAGAAATTCGCGAACGTCCACAAGGTATTCGGCGCAAGCAACGTGGCGAAGCTTTTGAACGAACTGAACGCGTCGCAGCGCGAGGACGCAGTGAACTCATTAGCCTACGAGGCCGAGTTCCGTTTACGAGACCCTGTGTACGGCTGCGTGGGCCTCATCTCTCTCCTCCAGCACAAGCTCAAGCAAATGCAAAGCGATCTCTACAATGCCAAAAAGGAACTCGCCTCTTACATTGGCCCTCAAGCCATGCTCCCAATGGCCCCGCAAGGCGCCAGCCCTTCCTCCGTCCTGTCCTACAACATGTCCCCCATGCTCGGGATTTCCCCTTCTCCGGGCTCCTCTCAGCAGATGCTCATCCGCGACTCGCCCCAGCAACACCACCAAATACAGCAGCAGCAACAGCAACAGCTGTTCGAGGCTCAGCAGTTGGCTGCAGCCGTGGCCGCCAGAGAGCAGCAGGAAATGTTTAGAGCGTACGAGCAGAAACAAACCCAACAGCACCATCATTCTCAACGCCAACACGAGCTCTTGAGGTTCAATGGGTTCGACCCGGCTGGGACTGGCGGCAGCGGCGGTGGGTTTAATCAAATGAATTCGGCGTCTAATTTGACATTGGGCACTTTTGTCGATAGCAGCTACCAAATTCAAACGCAACCTGAACATTCACATTCGCATTCGCATTCGCATTCGCATCACCATCATCATCAGCAGCTTCCGGTACAGCTGTTTCTTCAACCTCAGCAAACACAAGTCGAGCAGCAGCAGCAGCAACCACAACAACCCCATCAACACCAATCGCAGCAAACCCAGAAGCCTGAAGCCACTGCAGATGATGGTAGGAATATTAACATTGGCCCATCTTGTTAA | 966 | 53.42 | MSSSNSPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELNASQREDAVNSLAYEAEFRLRDPVYGCVGLISLLQHKLKQMQSDLYNAKKELASYIGPQAMLPMAPQGASPSSVLSYNMSPMLGISPSPGSSQQMLIRDSPQQHHQIQQQQQQQLFEAQQLAAAVAAREQQEMFRAYEQKQTQQHHHSQRQHELLRFNGFDPAGTGGSGGGFNQMNSASNLTLGTFVDSSYQIQTQPEHSHSHSHSHSHHHHHQQLPVQLFLQPQQTQVEQQQQQPQQPHQHQSQQTQKPEATADDGRNINIGPSC | 321 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 10928658 | 10929623 | + | Lag0008052.1 | Lac9g0565 | 619491 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac9g0565 | 321 | Coils | Coil | 86 | 106 | - | - | |
Lac9g0565 | 321 | ProSiteProfiles | LOB domain profile. | 6 | 107 | IPR004883 | - | |
Lac9g0565 | 321 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 5 | 260 | - | - | |
Lac9g0565 | 321 | MobiDBLite | consensus disorder prediction | 248 | 321 | - | - | |
Lac9g0565 | 321 | MobiDBLite | consensus disorder prediction | 273 | 309 | - | - | |
Lac9g0565 | 321 | Pfam | Lateral organ boundaries (LOB) domain | 7 | 104 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac6g2155 | Lac-Chr6:37715647 | Lac9g0565 | Lac-Chr9:10928658 | 2.20E-46 | dispersed | |
Lac8g0240 | Lac-Chr8:2655989 | Lac9g0565 | Lac-Chr9:10928658 | 3.90E-40 | dispersed | |
Lac8g2566 | Lac-Chr8:43367021 | Lac9g0565 | Lac-Chr9:10928658 | 5.60E-40 | dispersed | |
Lac8g2875 | Lac-Chr8:45888163 | Lac9g0565 | Lac-Chr9:10928658 | 4.60E-36 | dispersed | |
Lac9g0565 | Lac-Chr9:10928658 | Lac9g2362 | Lac-Chr9:42835271 | 1.40E-35 | dispersed | |
Lac9g0563 | Lac-Chr9:10833321 | Lac9g0565 | Lac-Chr9:10928658 | 2.50E-85 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
24388 | PF03195 | LOB | 1.90E-41 | No_clan | Lac | TF |
Pathway information
