Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g1067 ATGGAGGCTGCTGGCGACGCGTTTGTAGGTACTGTAGCTTTACCGCTGCAAATCGTGCAGATATGGAGTCATCGACAGCTTGCTACACGGATCTGGAAGCTGGTCTCTGATCTTCAGCCGTCCGATCAATCTTACAACTCCAGCAGAAACTCAACCAGCACCTCAAAGAATTATTCTGCTGATCAAAATCATTATTGCTACCTTCAGCCACACCCAGAAGAATGCTTCAGCAGCTTGTTCATGGAGGATGAAGATCATTTCTCTGCAGCCTCCTCTTCTACGAAGCAGCATAATCATCATCGTCACCGTCGTCATCCGTATCAACCCCAGCAGCTTCAATGCTCCGCCACCACGGCTAGTACTACTTCAACCGGTACTACTACTCCAACTGATCAATGGTTCTCCCCTTTTATCGGAGAGTTGAATTTCGAATTCTCTAATGATTGGGCCTCTACATTGCTTCTCCAAGCAGCCATTGCCATTGTAGAAAACAACACTTCTCGAATCCAACAACTCATGTGGATGCTCAACGAGCTCGGCTCTCCCTACGGCGACGTTGATCAAAAGCTAGCTTTCTATTTCCTTCAAGCTATGTTTAGTCGTGTCACTGACTCTGGTGACCGATGCTACCGAACCTTGGCAGCAGTGTCGGAGAAGCGATCTTGTTTCGAGTCAATGAGAAGAATGGTGCTCAAGTTTGAGGAGGTGAGTCCTTGGATGACGTTTGGTCATGTTGCTTCAAATGGAGCGATCATGGAGGCTTTTGAAGGAGAAAAGAAGTTGCATATAATTGATATAAGCAACTCCTTTTGCACTCAGTGGCCAACTTTTCTCGAAGCTCTTGCAACGCGATCACACGAAACTCCGCACCTCAGGCTCACGACATTGGTCACAACCAAATCGGATGGGAGCATTCGAGCTCATAAGAAGGTGATGAAAGAAATAAGTACAAGAATGGAGAAATTCGCCAGGCTTATGGGAGTTCCGTTCAAATTCAAAGCAATATTCCACTCCGGCGACGTTTCAGAGATCAATTTTACAGAATTAGGCGTCAAAGACGATGAGGCAGTCGCCGTCAACTGCGTCGGCGCGTTACGCTCCGTCGCGCCGGTCGACAACCGCCGCGATTTTCTAATATCGCAGTTTGGAGCTCTGCGGCCGAGGATAATCACAGTGGTAGAGGAGGAGGCGGATCTCGACGGTGACGGCGGCGGTGGCGTTGACTTTGTCAAAGAGGTTCAAGAGTGCTTACGGTGGTTTAGGGTTTACTTCGATTCGTTGGACGGAAGTTTTCCGACTGCCAGCGACGAGCGGTTGATGCTTGAACGAGCTGCCGGACGCGCCGTCGTGGACCTGCTGGCACGCGCCCCGGCGGAGTCTGTTGAGAGGCGCGAGACGGCGGCGCGTTGGGCGCGTCGTTTGCATGATGGTGGTTTCAATCCGGTCTCGTTCAGCGAGGATGTAAACGACGACGTACGAGCGCTCTTGAGGAGGTATAAGGACGGGTGGACGGTGACTGAGGACAGCGACGGCGCCGGAATATTCTTGGCTTGGAAGGAGCAACCGGTAGTTTGGGCCGCCGCATGGGCTCGTGGACCGCCGGACGGAGAAAAGAGTCGCCGGAGTAGTTCACCCGTGTGA 1641 51.55 MEAAGDAFVGTVALPLQIVQIWSHRQLATRIWKLVSDLQPSDQSYNSSRNSTSTSKNYSADQNHYCYLQPHPEECFSSLFMEDEDHFSAASSSTKQHNHHRHRRHPYQPQQLQCSATTASTTSTGTTTPTDQWFSPFIGELNFEFSNDWASTLLLQAAIAIVENNTSRIQQLMWMLNELGSPYGDVDQKLAFYFLQAMFSRVTDSGDRCYRTLAAVSEKRSCFESMRRMVLKFEEVSPWMTFGHVASNGAIMEAFEGEKKLHIIDISNSFCTQWPTFLEALATRSHETPHLRLTTLVTTKSDGSIRAHKKVMKEISTRMEKFARLMGVPFKFKAIFHSGDVSEINFTELGVKDDEAVAVNCVGALRSVAPVDNRRDFLISQFGALRPRIITVVEEEADLDGDGGGGVDFVKEVQECLRWFRVYFDSLDGSFPTASDERLMLERAAGRAVVDLLARAPAESVERRETAARWARRLHDGGFNPVSFSEDVNDDVRALLRRYKDGWTVTEDSDGAGIFLAWKEQPVVWAAAWARGPPDGEKSRRSSSPV 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 25222187 25230599 - Lag0008554.1 Lac9g1067 619993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g1067 546 Pfam GRAS domain family 152 529 IPR005202 -
Lac9g1067 546 ProSiteProfiles GRAS family profile. 141 530 IPR005202 -
Lac9g1067 546 MobiDBLite consensus disorder prediction 108 128 - -
Lac9g1067 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 108 529 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0045930(PANTHER)|GO:0048366(PANTHER)|GO:0055072(PANTHER)
Lac9g1067 546 MobiDBLite consensus disorder prediction 90 128 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2662 Lac-Chr1:47901921 Lac9g1067 Lac-Chr9:25222187 2.00E-163 dispersed
Lac4g1787 Lac-Chr4:36822893 Lac9g1067 Lac-Chr9:25222187 3.20E-106 dispersed
Lac4g3017 Lac-Chr4:48371850 Lac9g1067 Lac-Chr9:25222187 1.10E-32 dispersed
Lac9g1067 Lac-Chr9:25222187 Lac3g0856 Lac-Chr3:6861724 5.40E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24403 PF03514 GRAS 5.70E-100 CL0063 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g1067 K27743 - csv:101210294 681.789