Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g1086 ATGGGAGGAAATAGATTGGGAAGCTTTGTAGTGGTTTTGGTTATTGTTTTGACAACGTTGCCGGTTGTTCCGATGTGTGAGGCGCAGCTCCGGCGAGATTTCTACGCCGATGTCTGCCCTAACGTCGAGAGCATCGTCCGGAACGCCGTGACGAAGAAGTTCCGGCAGACTTTCGTCACCGTTCCAGCCACGCTCCGCCTCTTCTTTCACGACTGTTTCGTTCAGGGATGTGATGCATCGGTGCTGATTGCTTCGAGTGGAGGTAATACAGCAGAGAAGGATCATCCTGATAATCTTTCATTGGCCGGAGACGGGTTTGATACTGTAATCAAGGCCAAAGCGGCGGTTGATGCAGTGCCCGGATGTAGAAATAAAGTCTCTTGCGCCGATATTCTTGTCATGGCTACTCGAGATGTGATTTCATTGGCACGAGGACCTTCCTATGTGGTGGAACTGGGGAGGAAGGATGGGGTTGTGTCAAGAGCTTCAGATGTGGAAGGGAAATTGCCTCAGCCGACCTTTAATCTCAACCAGCTCAATGCCTTGTTTGCTGCCAATGGCCTTTCTCAGACTGACATGATTGCTCTCTCTGCGGCACATACCGTGGGATTCTCCCATTGTGGGAAGTTCGCGAACAGAATCTACAATTTCAGCGCTAGAAATCCAGTGGACCCCACACTGAACCCAACGTACGCAGCGAAGCTTCAAGGCATGTGTCCGAGAGACGTCGATCCAAGGATAGCCATAGACATGGATCCAAACACCCCGAGAAAGTTCGACAACATGTACTTCAAGAATCTCCAGCAGGGAATGGGCCTTTTCACTTCCGACCAAGTCCTCTTCACGGACCCAAGGTCCAGGCCCACTGTCAAGGTCTGGGCCCACAGTGGCCAGACCTTCTACAAGGCCTTCATCGATGCCATGACCAAGTTGGGCCGGGTCGGAGTCAAGACCGGATCCAACGGCAACATTCGCACTGATTGTGGTGCGTTTAATTAA 999 51.65 MGGNRLGSFVVVLVIVLTTLPVVPMCEAQLRRDFYADVCPNVESIVRNAVTKKFRQTFVTVPATLRLFFHDCFVQGCDASVLIASSGGNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPGCRNKVSCADILVMATRDVISLARGPSYVVELGRKDGVVSRASDVEGKLPQPTFNLNQLNALFAANGLSQTDMIALSAAHTVGFSHCGKFANRIYNFSARNPVDPTLNPTYAAKLQGMCPRDVDPRIAIDMDPNTPRKFDNMYFKNLQQGMGLFTSDQVLFTDPRSRPTVKVWAHSGQTFYKAFIDAMTKLGRVGVKTGSNGNIRTDCGAFN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 25580087 25582744 - Lag0008573.1 Lac9g1086 620012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g1086 332 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 ProSiteProfiles Plant heme peroxidase family profile. 29 332 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PANTHER - 14 332 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601(InterPro)
Lac9g1086 332 FunFam Peroxidase 170 311 - -
Lac9g1086 332 CDD secretory_peroxidase 29 331 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac9g1086 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Lac9g1086 332 Gene3D Peroxidase, domain 2 170 311 - -
Lac9g1086 332 SUPERFAMILY Heme-dependent peroxidases 29 332 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 FunFam Peroxidase 33 179 - -
Lac9g1086 332 Pfam Peroxidase 46 295 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1086 332 Gene3D - 33 332 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac8g2616 Lac-Chr8:43756430 Lac9g1086 Lac-Chr9:25580087 1.30E-78 dispersed
Lac8g2980 Lac-Chr8:46678010 Lac9g1086 Lac-Chr9:25580087 4.80E-113 dispersed
Lac8g2981 Lac-Chr8:46682092 Lac9g1086 Lac-Chr9:25580087 9.40E-109 dispersed
Lac9g1086 Lac-Chr9:25580087 Lac3g0810 Lac-Chr3:6451293 2.60E-58 dispersed
Lac1g2645 Lac-Chr1:47770754 Lac9g1086 Lac-Chr9:25580087 2.80E-145 transposed
Lac2g0680 Lac-Chr2:5100698 Lac9g1086 Lac-Chr9:25580087 4.00E-115 transposed
Lac10g1775 Lac-Chr10:21559474 Lac9g1086 Lac-Chr9:25580087 1.30E-46 wgd
Lac11g1712 Lac-Chr11:31035587 Lac9g1086 Lac-Chr9:25580087 3.60E-55 wgd
Lac13g1829 Lac-Chr13:22207321 Lac9g1086 Lac-Chr9:25580087 2.70E-50 wgd
Lac8g0409 Lac-Chr8:5201816 Lac9g1086 Lac-Chr9:25580087 1.00E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g1086 K00430 - csv:101208254 577.4