Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g1235 ATGGCGGACGAGCAGCCCTCAGCCGCTAATCGCCGGAGGAGCCGAGGATCTGAGGCAGCCGCCCGCCTTCAGGCTCTAGAACGTCTCAAAGCCATCCGCAGCGGCGGCCGTCGGTCGGAATCCGGTGCTTTCCAACTTAAGTTGGAGAACCCTATCTACGATACCATTCCCGAGGACGAGTACGATGCTCTCGTTGCGAAGCGTCGAGAAGAAGCCCGAGGGTTTATTGTTGACGACGACGGTCTTGGATATGGAGACGAGGGGGAAGAAGAGGATTGGTCTAAAGCTGGGGTTTGTACCTCCGATGAGTCTGACGGTGAGCTTGAGAAACCTAAGAAGAGGAAAACAGACAAGAAAGAAGCGCAACCCAAGAAGCCCTCTTCTTCTTCCCTATCGGCCGCCGCGGCGATGATGGGAAAGCAAAAACTTTCTTCGATGTTCACTTCATCGATCTTCAGGAAAACGGGTAGAGACGACAAGGCTAAAGGGTTGGCCTGTGACAGTATTGTCGATGATGTGATTGCCGAATTTGCGCCGGATGAAACTGATAGAGAGCGGCGTAGAAAGGGGCAAATTGGAGCTATACCGGTTTCGAGGACTTTTCCAGTTCCTGCTGTGAAGTGCGAGGGATTAACTGCCCAGAGTCTTAATTTGACTGGTGGATCTGAATCAATCAAGGATACTGAAAATGGGAACTCTGGAATGACCAGGGTTATTACGAGCAATGATTTGGAGCCTGTGCGAAACGGTGTAGAGGTCCAGGGAAATGGTGAGACTAAGGAATTTGATGAAAAGGAGGGTTTCAATTCTCAAATCAATCTGGATCCGACCGTCCAATCACATAATTCTTCGATCAAGGAAGATGTACATGAAGATAATATGCCAATTATGGTTGAAACAAAGGCAGAACCGTTAGTAAAGAAGGAGCCGGCTTGTACTTTGAATGCTAAGATTAGCGATGAAAAAGACCCAGCTTTGAGTGCTACTGCAGGATGGCAAGCAGTGAGGAGTGAAGGGAGTGGAAACGCTGATTCTGCTGCAGAAATTTCAGAAAAATCCGATTTTGATATTGACGCTGACGGCTCTCTGCCTTTCTATATAGTTGATGCGCATGAGGAGCTCTTTGGTGCAAATATGGGCATTGTATATCTGTTTGGCAAGGTCAAAGCTGGAGATACGTACCACAGTTGTTGTGTTGTGGTGAAAAACATGCAAAGATGCATATATGCTATTCCAAGTGCCTCTTTTCTTCATTCGGATGAGATGATGAAGCTTCAGAACGATGCTGAACAGTCTCGGCTTTCTCCTACAGATCTGCGTGCCAAGTTGCAAGAAGTGACTGCAGGATTAAAAAATGAAATAGCTAAACAGTTGCTAGATCTCAATGTTTCAACATTTAGCATGACACCGGTTCAGAGGAAATATGCATTTGAGCGTCAAGACATACCTGCGGGGGAAAATTACGTGCTTAAAATTAATTACCCATTCAAGCACCCACCGCTTCCTGCTGATCTAAAAGGAGAATCATTCTGTGCTCTCTTAGGAACACATCGCAGTGCTTTGGAGCTTCTTCTCATTAAAAGGAAAATAAAGGGCCCCTCCTGGTTGTCGATTTCAAAATTTTCTTCCTGTCCTGGTTCTCAACGAGTGAGCTGGTGCAAGTTTGAGGTGATAGTTGACTCTCCAAAAGATGTTCAGACTTCAACTTCATCAAGCAAAACTTTGGAGATTCCTTCTATGATTGTCAGTGCAATAAACATAAAGACCATCATTAACGAAAGGCAGAATGTCAATGAAATTGTGTCTGCATCTGTTATATGCTGTCAAAGAGCGAAGATTGACGGTCCCATGTTGGCCACAGAATGGAAAAAGCCTGGTATGCTTAGGCATTTTACTATCATCCGTAAGCTTGATGGTGGCATATTTCCTATGGGATTTGCTAAAGAGTCCACAGATAGAAATTTGAAGGCTGGATCAAATGTTTTAATCTGCGAGGGCAATGAAAGAGCCTTGTTGAATCGATTAATGATAGAGTTGTTCAAATTGGATAGTGATGTGCTGGTTGGACACAATATCTCTGGGTTTGACCTTGATATTCTTCTCCATCGAGCCCAGTTTTGCCGAGTACCAAGCAGCACGTGGTCTAAAATAGGTCGCCTTAAACGGTCTGTTATGCCTAAACTTGGAAAAGGAGGAAGCATTTTTGGGTCTGGAGCAAGTCCAGGAGTCATGTCTTGCATTGCTGGTCGACTCTTATGTGATACATACTTGTCTTCCCGTGACCTATTGAAAGAGATAAGTTATTCTTTGACAGAGCTAGCAAAGACTCAACTTAATAAGGACCGCAAGGAAGTCACTCCACATGATATTCCAAGAATGTACCAAGCATCGGAGTCTCTCATGAACCTGGGAGCTTTAGCAGAAGACTTAATTGTGGAGGTAGGCCAGATTAGGTTCCTGGAATTTAGTAGTGTTCTGCTGTGA 2484 45.13 MADEQPSAANRRRSRGSEAAARLQALERLKAIRSGGRRSESGAFQLKLENPIYDTIPEDEYDALVAKRREEARGFIVDDDGLGYGDEGEEEDWSKAGVCTSDESDGELEKPKKRKTDKKEAQPKKPSSSSLSAAAAMMGKQKLSSMFTSSIFRKTGRDDKAKGLACDSIVDDVIAEFAPDETDRERRRKGQIGAIPVSRTFPVPAVKCEGLTAQSLNLTGGSESIKDTENGNSGMTRVITSNDLEPVRNGVEVQGNGETKEFDEKEGFNSQINLDPTVQSHNSSIKEDVHEDNMPIMVETKAEPLVKKEPACTLNAKISDEKDPALSATAGWQAVRSEGSGNADSAAEISEKSDFDIDADGSLPFYIVDAHEELFGANMGIVYLFGKVKAGDTYHSCCVVVKNMQRCIYAIPSASFLHSDEMMKLQNDAEQSRLSPTDLRAKLQEVTAGLKNEIAKQLLDLNVSTFSMTPVQRKYAFERQDIPAGENYVLKINYPFKHPPLPADLKGESFCALLGTHRSALELLLIKRKIKGPSWLSISKFSSCPGSQRVSWCKFEVIVDSPKDVQTSTSSSKTLEIPSMIVSAINIKTIINERQNVNEIVSASVICCQRAKIDGPMLATEWKKPGMLRHFTIIRKLDGGIFPMGFAKESTDRNLKAGSNVLICEGNERALLNRLMIELFKLDSDVLVGHNISGFDLDILLHRAQFCRVPSSTWSKIGRLKRSVMPKLGKGGSIFGSGASPGVMSCIAGRLLCDTYLSSRDLLKEISYSLTELAKTQLNKDRKEVTPHDIPRMYQASESLMNLGALAEDLIVEVGQIRFLEFSSVLL 827
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 28659646 28665709 - Lag0008722.1 Lac9g1235 620161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g1235 827 CDD DNA_polB_alpha_exo 578 803 - -
Lac9g1235 827 Gene3D - 365 564 - -
Lac9g1235 827 FunFam DNA polymerase 405 531 - -
Lac9g1235 827 Gene3D - 578 814 IPR036397 GO:0003676(InterPro)
Lac9g1235 827 Pfam DNA polymerase alpha subunit p180 N terminal 26 93 IPR024647 -
Lac9g1235 827 SUPERFAMILY Ribonuclease H-like 356 807 IPR012337 -
Lac9g1235 827 Gene3D - 405 531 - -
Lac9g1235 827 MobiDBLite consensus disorder prediction 1 20 - -
Lac9g1235 827 Pfam DNA polymerase family B, exonuclease domain 518 772 IPR006133 -
Lac9g1235 827 MobiDBLite consensus disorder prediction 76 136 - -
Lac9g1235 827 MobiDBLite consensus disorder prediction 1 18 - -
Lac9g1235 827 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 14 808 - GO:0003682(PANTHER)|GO:0003688(PANTHER)|GO:0003697(PANTHER)|GO:0003887(PANTHER)|GO:0005658(PANTHER)|GO:0006272(PANTHER)|GO:0006273(PANTHER)|GO:1902975(PANTHER)
Lac9g1235 827 MobiDBLite consensus disorder prediction 88 124 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g1235 K02320 - csv:101211201 1362.05