Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g1247 ATGGATTTTGATCTTTTCCTTTGCATTTCGCTCTCTCTTATCTCTGTCCTTCTTGGCTACACCTTTCTATGGCAACCTCACCGCCGAAACCTGCCACCAACCCCACCTTTTTCTCTTCCATTCATAGGCCATCTCCATCTCCTCAAACATCCCGTCCACCAAACACTTGCCAAACTCTCACAAAATCTCGGCCAACTCTTCTCTCTCCGATTCGGCTCCCGTCTTGTCGTCGTCGTATCTTCTCCTTCTGCCGTCCACGAATGCTTCACAAAGAACGACATCATTCTCGCAAACCGGCCACTCTTGAACACTGGAAAGTACTTAGCACACAACAATTCCACCATGGTGGTCGCTCCCTACGGCGACCATTGGCGAAACCTCCGCCGAATCAGCGCCCTCGAGGTTTTCTCAACCACCCGCCTTAATTCCTTCGTGGGTATTCGTCAAGATGAGGTCAAGCGTTTGCTGTGCAATCTATGTGGTGATGATTCCTTGGAAGAGTTCAGGGTGGTGGAGTTGGAGCCGATGCTGTTGGATCTTACGTTCAATATTGTTATGAGGATGGTGGCTGGAAAGAAGTTTTATGGAGAGGACGTGTTGGATGAGGGATATTCTAAAAGATTTAGAGAGTTGGTGACAGAGATTATGGCACATGGTGGGTCAACGAATCCAGGTGACTTCATACCCTTGTGGAATTGGATTGATCCAACTGGTTTTGAGAAGAGGATCATGAAGCTTGGAAGGAGAGCTGATGAACTCCTTCAAGAATTAGTGGATGAGATTCGAAATAAAAATGATGGAGGAAACACTATGATTGACCATTTACTTCGCTTGCAAAACACAGAACCTCAATATTATAGTGACCAAGTTATCAAAGGTCTCATACAAGATATATTCTTAGCAGGGATTGACTCAACTGCTGTGACCTTAGAATGGGCACTGTCTCATTTACTTAACAACCCGGACGTTTTAAAGAGGGCCACTGCTGAGATAGATTGTTCGGTTGGACAAGAGGATATGGTTAATGAAGTTCATTTGTCGAGTTTAAGCTACTTGCAAGGAATTATATCCGAGACTCTACGGCTAAGTCCGGCTGGTCCTTTGCTTGTACCACACTGTGCATCTGAAGATTGTAAAATACAAGGCTATGATGTTCCACGTGATACAATTGTGTTGATTAATGCTTGGGCTATACATCGAGATCCAAATCTATGGGAAGATGCCACTAGATTTAAGCCTGAAAGACATGTAAATATGATTGGATTTGACTCATACAAACTATTACCATTTGGTTTGGGGAGGAGAGCATGTCCTGGTATGGGAATGGCGCAACGAGTGGTTGGCTTGACTTTGGCATCGCTGATTCAATGCTTTGAATGGAAAAGAATGAGCAACTTATTGGTTGACATGAAGGAAGGTAAAGGGCTCACTATGCCCAAAGCTGAATCATTAGTGGCCAAGTGTAGACCGCGCCCTATAATGAAAGCTATTCTTAGCAAATCAACTGCCCATATTTGA 1518 44.47 MDFDLFLCISLSLISVLLGYTFLWQPHRRNLPPTPPFSLPFIGHLHLLKHPVHQTLAKLSQNLGQLFSLRFGSRLVVVVSSPSAVHECFTKNDIILANRPLLNTGKYLAHNNSTMVVAPYGDHWRNLRRISALEVFSTTRLNSFVGIRQDEVKRLLCNLCGDDSLEEFRVVELEPMLLDLTFNIVMRMVAGKKFYGEDVLDEGYSKRFRELVTEIMAHGGSTNPGDFIPLWNWIDPTGFEKRIMKLGRRADELLQELVDEIRNKNDGGNTMIDHLLRLQNTEPQYYSDQVIKGLIQDIFLAGIDSTAVTLEWALSHLLNNPDVLKRATAEIDCSVGQEDMVNEVHLSSLSYLQGIISETLRLSPAGPLLVPHCASEDCKIQGYDVPRDTIVLINAWAIHRDPNLWEDATRFKPERHVNMIGFDSYKLLPFGLGRRACPGMGMAQRVVGLTLASLIQCFEWKRMSNLLVDMKEGKGLTMPKAESLVAKCRPRPIMKAILSKSTAHI 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 28876482 28878187 - Lag0008734.1 Lac9g1247 620173
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac9g1247 505 Gene3D Cytochrome P450 24 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 Pfam Cytochrome P450 33 480 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac9g1247 505 CDD CYP81 64 484 - -
Lac9g1247 505 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 SUPERFAMILY Cytochrome P450 32 491 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 FunFam Cytochrome P450 family protein 24 494 - -
Lac9g1247 505 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1247 505 PANTHER CYTOCHROME P450 82C3-RELATED 18 491 IPR050651 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2613 Lac-Chr1:47497584 Lac9g1247 Lac-Chr9:28876482 7.50E-158 dispersed
Lac4g2084 Lac-Chr4:40534507 Lac9g1247 Lac-Chr9:28876482 1.00E-149 dispersed
Lac9g1247 Lac-Chr9:28876482 Lac12g2490 Lac-Chr12:41931134 1.80E-82 dispersed
Lac9g1247 Lac-Chr9:28876482 Lac9g1255 Lac-Chr9:29086268 7.50E-214 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g1247 K13260 - csv:101205626 790.801