Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac9g1255 | ATGGATATGTTCTTCCTTTCCATTTCTCTCTCTCTGTTCTCTCTCCTTCTTGCCTTGAGCTTTCTTCTTCGATCTCACCGCCAAATCAACCTTCCACCAACCCCACTTTTTTCTCTTCCAATTATCGGCCATCTCCATCTCATCAAACATCCCGTTCATCGAATCCTTCACAACCTCTCCAAAAAGTACGGCCACGTCTTCTCTCTCCGATTTGGCTCACGCCTCGTTGTAGTCGTATCATCCCCTTCCGTTGCCCAAGAATGCTTTACAAAGAACGATATCCTTCTCGCCAATCGCCCATTGCTGGGCACTGGCAAGCACTTGGCATACAACCATACCACCATGGCCGTCGCCCCTTACGGTGAACACTGGCGGAACCTTCGCCGAATCGGCGCCCTTGAGATTTTCTCGACAAGCCGCCTGAATCTCTTCTTGGGAGTTCGAGAGGATGAAGTTAAACGCTTGATGCTTAGGCTGTGTGGGAGTTCGTTGGAAGAATTCACTCTGGTGGAGCCGGAGTCGATGTTCTTGGATCTTATGTACAATGTTATTATGAGAATGGTGGCTGGGAATAAGCCTTATGAAGAGGATAAGGGACAGTCGAGGGAATTTAGAGAGGTGGTGACACGGATTATGGTGGTTGGTGGGGCAACGAATCCAGGAGACTTCATACCCATATGGAATTGGATCGATCCGAGTGGTTTGGAGAAGAAGATAATGAAGCTTGGACATACAATGGATGAACTTCTCCAAGAATTAGTTGATGGGATTAGAAACAATCAAGAAGGTGAAGGGAACACTATGATTGGTCGTTTACTTCATTTGCAGAAAACTGAGCCTGAAAATCATAGTGACCAAATTATCAAAGGCCTAATACAAATCATATTAATAGCAGGGATTGACACAACAGCCGTAACCTTAGAGTGGGCGCTCTCTCATCTACTCAACAATCCAGTTGTGTTGGAGAAAGCAAAAGCCGAGATAGATAATTGTATCGGACAGGAGCGCTTGGTGAACGAAGCAGATTTGTCGAGTTTGAATTATCTGCAGGGAATCATTTCTGAGACTCTACGACTGACCCCAGCAGCTCCTTTGCTTGTGCCACATTGCGCTTCTGAAGACTGCAAAATTGGAGGCTACGATGTACCACGCGACACAATTGTGTTGATTAATGCTTGGGCTATTCATAGAGATCCCAACCTATGGGAAGATCCCACAAGTTTTAAGCCTGAAAGATATACAAATCCTATTGGAGTTGACTCATATAAACTGTTACCATTCGGATCGGGGAGGAGAGCTTGCCCTGGAATGGGAATAGCTCAACGAGTGGCTAGCTTGACTTTGGCATCGTTGATTCAATGCTTTGAGTGGGAAAGAGAGGGCACTTCAATGGTGGACATGAGTGAAGGTGAAGGTATTACAATGCCCAAAGCTCAACGATTGGTGGCCAAGTGTAAACCACGTCCAATCATGAAAGCTATTTTCAGCGATTCAGTTGATCACGACATTTGA | 1512 | 45.77 | MDMFFLSISLSLFSLLLALSFLLRSHRQINLPPTPLFSLPIIGHLHLIKHPVHRILHNLSKKYGHVFSLRFGSRLVVVVSSPSVAQECFTKNDILLANRPLLGTGKHLAYNHTTMAVAPYGEHWRNLRRIGALEIFSTSRLNLFLGVREDEVKRLMLRLCGSSLEEFTLVEPESMFLDLMYNVIMRMVAGNKPYEEDKGQSREFREVVTRIMVVGGATNPGDFIPIWNWIDPSGLEKKIMKLGHTMDELLQELVDGIRNNQEGEGNTMIGRLLHLQKTEPENHSDQIIKGLIQIILIAGIDTTAVTLEWALSHLLNNPVVLEKAKAEIDNCIGQERLVNEADLSSLNYLQGIISETLRLTPAAPLLVPHCASEDCKIGGYDVPRDTIVLINAWAIHRDPNLWEDPTSFKPERYTNPIGVDSYKLLPFGSGRRACPGMGIAQRVASLTLASLIQCFEWEREGTSMVDMSEGEGITMPKAQRLVAKCKPRPIMKAIFSDSVDHDI | 503 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 29086268 | 29088433 | + | Lag0008742.1 | Lac9g1255 | 620181 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac9g1255 | 503 | PRINTS | P450 superfamily signature | 351 | 362 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | PRINTS | P450 superfamily signature | 425 | 434 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | PRINTS | P450 superfamily signature | 298 | 315 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | PRINTS | P450 superfamily signature | 434 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | PANTHER | CYTOCHROME P450 82C3-RELATED | 15 | 488 | IPR050651 | - | |
Lac9g1255 | 503 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 427 | 436 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Lac9g1255 | 503 | PRINTS | E-class P450 group I signature | 424 | 434 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | PRINTS | E-class P450 group I signature | 391 | 415 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | PRINTS | E-class P450 group I signature | 434 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | PRINTS | E-class P450 group I signature | 350 | 368 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | PRINTS | E-class P450 group I signature | 287 | 304 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | PRINTS | E-class P450 group I signature | 307 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | Pfam | Cytochrome P450 | 32 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | CDD | CYP81 | 64 | 481 | - | - | |
Lac9g1255 | 503 | FunFam | Cytochrome P450 family protein | 23 | 491 | - | - | |
Lac9g1255 | 503 | Gene3D | Cytochrome P450 | 20 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac9g1255 | 503 | SUPERFAMILY | Cytochrome P450 | 32 | 488 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac1g2615 | Lac-Chr1:47508697 | Lac9g1255 | Lac-Chr9:29086268 | 3.80E-165 | dispersed | |
Lac5g2316 | Lac-Chr5:41818343 | Lac9g1255 | Lac-Chr9:29086268 | 6.30E-31 | dispersed | |
Lac6g0264 | Lac-Chr6:2132886 | Lac9g1255 | Lac-Chr9:29086268 | 4.70E-126 | dispersed | |
Lac7g0132 | Lac-Chr7:1051535 | Lac9g1255 | Lac-Chr9:29086268 | 9.60E-71 | dispersed | |
Lac9g1255 | Lac-Chr9:29086268 | Lac12g2491 | Lac-Chr12:41936321 | 2.10E-83 | dispersed | |
Lac9g1247 | Lac-Chr9:28876482 | Lac9g1255 | Lac-Chr9:29086268 | 7.50E-214 | proximal | |
Lac11g2230 | Lac-Chr11:38343552 | Lac9g1255 | Lac-Chr9:29086268 | 5.30E-69 | wgd | |
Lac9g1255 | Lac-Chr9:29086268 | Lac9g1471 | Lac-Chr9:33084072 | 2.00E-44 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac9g1255 | K13260 | - | csv:101204413 | 791.956 |