Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g1255 ATGGATATGTTCTTCCTTTCCATTTCTCTCTCTCTGTTCTCTCTCCTTCTTGCCTTGAGCTTTCTTCTTCGATCTCACCGCCAAATCAACCTTCCACCAACCCCACTTTTTTCTCTTCCAATTATCGGCCATCTCCATCTCATCAAACATCCCGTTCATCGAATCCTTCACAACCTCTCCAAAAAGTACGGCCACGTCTTCTCTCTCCGATTTGGCTCACGCCTCGTTGTAGTCGTATCATCCCCTTCCGTTGCCCAAGAATGCTTTACAAAGAACGATATCCTTCTCGCCAATCGCCCATTGCTGGGCACTGGCAAGCACTTGGCATACAACCATACCACCATGGCCGTCGCCCCTTACGGTGAACACTGGCGGAACCTTCGCCGAATCGGCGCCCTTGAGATTTTCTCGACAAGCCGCCTGAATCTCTTCTTGGGAGTTCGAGAGGATGAAGTTAAACGCTTGATGCTTAGGCTGTGTGGGAGTTCGTTGGAAGAATTCACTCTGGTGGAGCCGGAGTCGATGTTCTTGGATCTTATGTACAATGTTATTATGAGAATGGTGGCTGGGAATAAGCCTTATGAAGAGGATAAGGGACAGTCGAGGGAATTTAGAGAGGTGGTGACACGGATTATGGTGGTTGGTGGGGCAACGAATCCAGGAGACTTCATACCCATATGGAATTGGATCGATCCGAGTGGTTTGGAGAAGAAGATAATGAAGCTTGGACATACAATGGATGAACTTCTCCAAGAATTAGTTGATGGGATTAGAAACAATCAAGAAGGTGAAGGGAACACTATGATTGGTCGTTTACTTCATTTGCAGAAAACTGAGCCTGAAAATCATAGTGACCAAATTATCAAAGGCCTAATACAAATCATATTAATAGCAGGGATTGACACAACAGCCGTAACCTTAGAGTGGGCGCTCTCTCATCTACTCAACAATCCAGTTGTGTTGGAGAAAGCAAAAGCCGAGATAGATAATTGTATCGGACAGGAGCGCTTGGTGAACGAAGCAGATTTGTCGAGTTTGAATTATCTGCAGGGAATCATTTCTGAGACTCTACGACTGACCCCAGCAGCTCCTTTGCTTGTGCCACATTGCGCTTCTGAAGACTGCAAAATTGGAGGCTACGATGTACCACGCGACACAATTGTGTTGATTAATGCTTGGGCTATTCATAGAGATCCCAACCTATGGGAAGATCCCACAAGTTTTAAGCCTGAAAGATATACAAATCCTATTGGAGTTGACTCATATAAACTGTTACCATTCGGATCGGGGAGGAGAGCTTGCCCTGGAATGGGAATAGCTCAACGAGTGGCTAGCTTGACTTTGGCATCGTTGATTCAATGCTTTGAGTGGGAAAGAGAGGGCACTTCAATGGTGGACATGAGTGAAGGTGAAGGTATTACAATGCCCAAAGCTCAACGATTGGTGGCCAAGTGTAAACCACGTCCAATCATGAAAGCTATTTTCAGCGATTCAGTTGATCACGACATTTGA 1512 45.77 MDMFFLSISLSLFSLLLALSFLLRSHRQINLPPTPLFSLPIIGHLHLIKHPVHRILHNLSKKYGHVFSLRFGSRLVVVVSSPSVAQECFTKNDILLANRPLLGTGKHLAYNHTTMAVAPYGEHWRNLRRIGALEIFSTSRLNLFLGVREDEVKRLMLRLCGSSLEEFTLVEPESMFLDLMYNVIMRMVAGNKPYEEDKGQSREFREVVTRIMVVGGATNPGDFIPIWNWIDPSGLEKKIMKLGHTMDELLQELVDGIRNNQEGEGNTMIGRLLHLQKTEPENHSDQIIKGLIQIILIAGIDTTAVTLEWALSHLLNNPVVLEKAKAEIDNCIGQERLVNEADLSSLNYLQGIISETLRLTPAAPLLVPHCASEDCKIGGYDVPRDTIVLINAWAIHRDPNLWEDPTSFKPERYTNPIGVDSYKLLPFGSGRRACPGMGIAQRVASLTLASLIQCFEWEREGTSMVDMSEGEGITMPKAQRLVAKCKPRPIMKAIFSDSVDHDI 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 29086268 29088433 + Lag0008742.1 Lac9g1255 620181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g1255 503 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 PANTHER CYTOCHROME P450 82C3-RELATED 15 488 IPR050651 -
Lac9g1255 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac9g1255 503 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 Pfam Cytochrome P450 32 478 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 CDD CYP81 64 481 - -
Lac9g1255 503 FunFam Cytochrome P450 family protein 23 491 - -
Lac9g1255 503 Gene3D Cytochrome P450 20 491 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g1255 503 SUPERFAMILY Cytochrome P450 32 488 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2615 Lac-Chr1:47508697 Lac9g1255 Lac-Chr9:29086268 3.80E-165 dispersed
Lac5g2316 Lac-Chr5:41818343 Lac9g1255 Lac-Chr9:29086268 6.30E-31 dispersed
Lac6g0264 Lac-Chr6:2132886 Lac9g1255 Lac-Chr9:29086268 4.70E-126 dispersed
Lac7g0132 Lac-Chr7:1051535 Lac9g1255 Lac-Chr9:29086268 9.60E-71 dispersed
Lac9g1255 Lac-Chr9:29086268 Lac12g2491 Lac-Chr12:41936321 2.10E-83 dispersed
Lac9g1247 Lac-Chr9:28876482 Lac9g1255 Lac-Chr9:29086268 7.50E-214 proximal
Lac11g2230 Lac-Chr11:38343552 Lac9g1255 Lac-Chr9:29086268 5.30E-69 wgd
Lac9g1255 Lac-Chr9:29086268 Lac9g1471 Lac-Chr9:33084072 2.00E-44 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g1255 K13260 - csv:101204413 791.956