Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac9g1463 | ATGGAGATTTGGCTCATCGTCCTCATCTCTCTCTGCATCTGCTGTCTTCTCAACTCCATTTTTGCCCAATTTCGAAGCTCTACCAACCTCCCACCAAGCCCATTTTTGTGGGCTTCAGTTCCAATTATCACCATTTTCCTACGGCTTCGCAAATCGCCTCTCCAATTTGAATCTCTACTTCGCAGTTTTGCCGCCAAATATGGCCCCATCATCACCATCCACTTCAACAACCACCCTGCCATCTTCATCGCCGATCGCTTCGTTGCCCATAAGGCCCTCCTCCAGAACGGCGTTCTCTTCGCCAACCGTGCACCGCGTCCTCCAACCACCAAGATCTTGAGCAGCAACCAGCCCAACATCAGCTCTGAAAATTACGGCCCACTCTGGCGCCTCCTCCGTCGTAATCTCACTTCCCAAATCCTCCATCCTTCTCGGGTCAAGTCTTACGCTCGAGCTCGCAAGTGGGTTTTGAATATTCTTCTCAATCGCCTTCTCTCTCACTCTGAATCAGGAACTCCCGTCTCCGTTGCCGATCATTTTCAGCACACCATGTTCTGTTTGTTGGTATTCATGTGTTTTGGGGACAGGCTTGACGAAACCAAGATCATGGAAATTTTGAACCTGCAGCGTCAGATACTGGTGAATCTTGGGCGTTCCCAAGTCCTCAATTTCTTGCCGAAATTGACCAAGCTTTTCCTTCGAAAGCGCTGGGAGATCCTTTTTGAACTCAGAAGGAACCAAGAGAAAGTCCTCATCCCTTTGATTGAAGCTAGAAGGAAGGCCAACCAAAACAGAGCAAACAGATCGGAAGGTCAAGAAGACGATGAAGAATTCGTGGTGTCGTATGTGGATACGCTCCTCGATTTGGAGCTCCCCGACGAGAATAGAATGCTTACAGATGACGAGATGGTCACCATAAGCTTCGAATTCCTCAACGCTGGCAGCGACAACACCTCCACGGCCTTGCAGTGGATAATGGCGAATATAGTGAAATACCCAGAAATTCAAAACAAGCTTTTCGCTGAGATCAAAGGAGTAAAGGGAGAGGAATCGGGGGAGGAGGAGGTGAAGGAAGAGGATTTGGGGAAACTTCCATATTTGAAGGCTGTGGTTTTGGAAGGATTAAGAAGACACCCACCAGTGCATTTCCTGCTACCACACGCGGTGAAAGAAGATACAGTGTCGGAAAATTATGTGATACCAAAGAATGGAACTGTGAATTTCATGGTGGCGGAGATGGGTTGGGATCCAAAAGTGTGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGAAGGGCGGCAATTGCAAAGAAGAAGAAGTGGCGTTTGATATAACAGGGAGCAAAGAAATAAAGATGATGCCGTTCGGAGCAGGGAGAAGGATGTGTCCTGGATTTGGTTTGGCAATTCTTCATTTGGAGTATTTCGTTGCCAATTTGGTATGGAGGTTTGAATGGAAAGCCTTAGATGGAGACGAAGTTGATCTGTCTGAGAAGGTGGAATTCACTGTCGCCATGGAAAAGCCTCTTCAAGCTAACATACATCCGAGGTGA | 1557 | 47.85 | MEIWLIVLISLCICCLLNSIFAQFRSSTNLPPSPFLWASVPIITIFLRLRKSPLQFESLLRSFAAKYGPIITIHFNNHPAIFIADRFVAHKALLQNGVLFANRAPRPPTTKILSSNQPNISSENYGPLWRLLRRNLTSQILHPSRVKSYARARKWVLNILLNRLLSHSESGTPVSVADHFQHTMFCLLVFMCFGDRLDETKIMEILNLQRQILVNLGRSQVLNFLPKLTKLFLRKRWEILFELRRNQEKVLIPLIEARRKANQNRANRSEGQEDDEEFVVSYVDTLLDLELPDENRMLTDDEMVTISFEFLNAGSDNTSTALQWIMANIVKYPEIQNKLFAEIKGVKGEESGEEEVKEEDLGKLPYLKAVVLEGLRRHPPVHFLLPHAVKEDTVSENYVIPKNGTVNFMVAEMGWDPKVWEDPMAFKPERFMKGGNCKEEEVAFDITGSKEIKMMPFGAGRRMCPGFGLAILHLEYFVANLVWRFEWKALDGDEVDLSEKVEFTVAMEKPLQANIHPR | 518 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 32910459 | 32912015 | - | Lag0008950.1 | Lac9g1463 | 620389 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac9g1463 | 518 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 11 | 518 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Lac9g1463 | 518 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | PRINTS | P450 superfamily signature | 455 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | PRINTS | P450 superfamily signature | 464 | 475 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | SUPERFAMILY | Cytochrome P450 | 31 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | Gene3D | Cytochrome P450 | 24 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | PRINTS | E-class P450 group I signature | 409 | 433 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | PRINTS | E-class P450 group I signature | 454 | 464 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | PRINTS | E-class P450 group I signature | 88 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | PRINTS | E-class P450 group I signature | 464 | 487 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | FunFam | Cytochrome P450 family protein | 24 | 518 | - | - | |
| Lac9g1463 | 518 | Pfam | Cytochrome P450 | 39 | 504 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1463 | 518 | CDD | CYP77_89 | 66 | 512 | - | - | |
| Lac9g1463 | 518 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 457 | 466 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac9g1463 | Lac-Chr9:32910459 | Lac9g1469 | Lac-Chr9:33061015 | 1.60E-232 | dispersed | |
| Lac9g1463 | Lac-Chr9:32910459 | Lac9g1466 | Lac-Chr9:32968133 | 8.20E-224 | proximal | |
| Lac7g1926 | Lac-Chr7:29132811 | Lac9g1463 | Lac-Chr9:32910459 | 4.80E-11 | transposed | |
| Lac9g0389 | Lac-Chr9:6960956 | Lac9g1463 | Lac-Chr9:32910459 | 1.90E-39 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac9g1463 | K24184 | - | csv:101204559 | 717.613 |