Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac9g1466 | ATGGAGAGCTGGTTCATCATCCTCGTCTCCCTCTGCGTCTGCTCTCTTCTCAGCTCCATTTTTACCCAATTCCGAAGCTCCACCAAGCTTCCACCAGGCCCTCCTTCAATTCCCTTCGTCACCACGTTCCAATTAATCCGCAAATCCCCACTCCAAATCGAGTCTCTGCTCCGCAGTTTCGTCCCAGAGTACGGCCCCATCCTCACCCTCCGCATCGGCCCCCGCCCCATCATCTTCATCGCCGACCGCACCATTGCCCACAAGGTCCTCGTCCAAAACGGCGCTCTCTTCGCCGACCGTCCACCGGCTCCTCCGTTGAGGAAGGTCTTCACCAGCAACCAGCACAGCATCAGCTCTGCCACTTACGGCCCACTCTGGCGCCTCCTCGGCCGAAATCTCACTTCCCAAATCCTCCATCCCTCTCGGGTCAGGTCCTACGCACGTGCTCGCAAGTGGGTTCTGGATATTCTTCTCACTCGCCTTCTGTCTCAGTCTGAATCTGGAAACCCCGTCCCTGTCGTCGATCATTTTCGGTTCGCTATGTTCTGTTTGTTGGTGTTGATGTGCTTTGGAGATAAGCTTGACGAGTCTCAGATCCGAGAAATCGAGAACGTGGAGCGGGCGATGATGTTGAGTTTTGGGCGTTTCAACGTTCTAAATTTCTGGCCCAAAGTCACCAAGATTTTGCTCCGGAAACGCTGGGAGGCGTTTCTACGAATAAGAAGGAACCAAAAGAAAGTCCTAATTCCGTTGATTGAAGCAAGAAGGAAGGCCAAACAAAACAGAGCAAACAGAGGCCAAACTGAAAAAGAAGAAGAAGAAGAATTCGTGTTGTCATATGTGGATACGCTGCTCGATTTGGAGCTCCCAGAAGAGAAGAGAAAGCTTAACGATGAAGAACTTGTCACTTTATGCTCCGAATTTCTCAACGGCGGCACGGATACGACCACCACGGCCTTGCAGTGGATAATGGCGAATTTAGTGAAATACCCAGAAATTCAAAACAAGCTCTATGCAGAGATCAAAGGAGTAATGGGGGATGGATCGAAGGAGGAGGTGAAGGAAGAAGACTTGGGGAAACTTCCATATCTGAAAGCTGTGGTTTTAGAAGGATTGCGAAGACACCCGCCGACGAATTTTGTGCTACCGCACGCGGTGAAAGAAGATACAGAGTTGGGAAATTACATTATACCAAAGAATGGAGGCATAAATTTCATGGTGGCGGAGATGGGTCGGGATCCAAAAGTGTGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGAAGGGCGGCAATTGCAAAGAAGAAGAAGTGGCGTTTGATATAACAGGGAGCAAAGAAATAAAGATGATGCCGTTCGGAGCAGGGAGAAGGATATGTCCTGGATTTGGTTTGGCAATTCTTCATTTGGAGTATTTCGTTGCTAATTTAGTATGGAGGTTGGAATGGAAGGCCTTAGAAGGAGACGAAGTTGATCTGTCAGAGAAGGTAGAGCTCACCATTGTGATGAAAAATCCTCTCAAAGCGAACATACATCCAAGGTTTCAGATTCCATAG | 1560 | 49.23 | MESWFIILVSLCVCSLLSSIFTQFRSSTKLPPGPPSIPFVTTFQLIRKSPLQIESLLRSFVPEYGPILTLRIGPRPIIFIADRTIAHKVLVQNGALFADRPPAPPLRKVFTSNQHSISSATYGPLWRLLGRNLTSQILHPSRVRSYARARKWVLDILLTRLLSQSESGNPVPVVDHFRFAMFCLLVLMCFGDKLDESQIREIENVERAMMLSFGRFNVLNFWPKVTKILLRKRWEAFLRIRRNQKKVLIPLIEARRKAKQNRANRGQTEKEEEEEFVLSYVDTLLDLELPEEKRKLNDEELVTLCSEFLNGGTDTTTTALQWIMANLVKYPEIQNKLYAEIKGVMGDGSKEEVKEEDLGKLPYLKAVVLEGLRRHPPTNFVLPHAVKEDTELGNYIIPKNGGINFMVAEMGRDPKVWEDPMAFKPERFMKGGNCKEEEVAFDITGSKEIKMMPFGAGRRICPGFGLAILHLEYFVANLVWRLEWKALEGDEVDLSEKVELTIVMKNPLKANIHPRFQIP | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 32968133 | 32969692 | + | Lag0008953.1 | Lac9g1466 | 620392 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac9g1466 | 519 | CDD | CYP77_89 | 63 | 509 | - | - | |
| Lac9g1466 | 519 | SUPERFAMILY | Cytochrome P450 | 31 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac9g1466 | 519 | Gene3D | Cytochrome P450 | 24 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | Pfam | Cytochrome P450 | 31 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | FunFam | Cytochrome P450 family protein | 24 | 517 | - | - | |
| Lac9g1466 | 519 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac9g1466 | 519 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 10 | 515 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac9g1466 | Lac-Chr9:32968133 | Lac9g1471 | Lac-Chr9:33084072 | 1.60E-243 | dispersed | |
| Lac9g1463 | Lac-Chr9:32910459 | Lac9g1466 | Lac-Chr9:32968133 | 8.20E-224 | proximal | |
| Lac9g1466 | Lac-Chr9:32968133 | Lac9g1469 | Lac-Chr9:33061015 | 3.20E-244 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac9g1466 | K24184 | - | csv:101220777 | 830.091 |