Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g1508 ATGGCCACTTCCTTGCTAAGTCATCTCTTTCTCCTTCTTCTTCTCTATTTTGCTCTCTTTGTTGACTCAGTTTTTTTCAAACTTGATCCAATCGAGCCCAATGAAAATCGTTTACTTTACCAAGGAGATGCAGTTCCTTCTAATGGAGGAGTTCTATTCAGCGATCCTTCGTACACCTGTCTTGTTGGTCGAGCTATTTACAGAGATGCCGTGCCAATTTGGGATTCTGAAACAGGAAAAGTCACCGATTTCACAACTCATTTCTCCTTCACTATTGATACACAACATGCTACAGAATATGGCCATGGGGTTGTTTTCTTCTTGGCCCCAGCTGGGTTTCAGATCCCTCCAAACTCAGCTGGTGGGTTTCTTGGCCTTTTCAACAAGACGTACAATGATTCACCCATAAACCAAATCGTTCATGTTGAGTTTGATTCTTTCTCTAATGAATGGGATCCTAAATTTGAACATGTGGGTATCAACATTAACTCGCTTTCTTCCTCTAATTTCACTAGTTGGAACGTTAGCTTACACAGCCTGGACACTGTTGATGTGTTTATTTCGTACGATTCGACCACCAAAAACTTGGGTGTCTCATGGAAACATCAGAAGACATCGACTTCTTTTGAAAATACAACCCTGAGTTACCAGATTGATCTTATGAAGGTTCTTCCTCAATGGGCTACGGTAGGATTTTCAGCTGCAACAGGTAAATTTTCAGAGCGACATTTGCTATTTTCTTGGGAATTCAACTCAAGCTTGGAAATGAAACAACCAGGCGAAAATAATGGGAAAAAAGTTGATAAAATTGTGGGTCTCACAGTTTCACTTGGAGTTTTCATTATTATCGTGGCAATAATAGCATTCGTGGTGTTTTGGAGATTGAAGCAAAAGAAACGAAAAGCAGGACCAGAAAACCTTGAGGAAGTAAACTTGACATCCATTAACGATGACTTGGAAAGAGGGGTTGGACCGAGGAGGTTTTCTCACAAGCTTCTTGCCATGGCCACCAACAATTTCTCAGACGAGAGGAAGCTTGGCCAAGGAGGATTTGGTGCAGTGTACAGAGGGCACATACCAGATATAGATTTGACTGTAGCTGTGAAGAAAATCTCAAGGGGTTCTAAACAAGGAAGAAAAGAGTACATAACTGAGGTGAAGATCATTAGTAGGCTTCGACATCGCAATTTGGTGCAACTCATAGGTTGGTGCCATGAGAAGGGCGAGTTCTTGTTAGTTTATGAATTCATGCCTAATGGTAGTCTTGATTCTCATCTCTTTGGCAAGAGAAACCCTCTTGCTTGGGCAGTGAGATATAAGATTGCTTTAGGTTTAGCATCTGCGTTGTTATATCTTCATGAAGAATGGGAACAATGCGTGGTTCATAGAGATATTAAATCTAGCAATGTCATGTTAGATTCAAACTTCAACGTCAAGCTTGGAGATTTTGGGCTGGCTCGATTAATGGACCATGAATTGGGTGCTCAAACAACTGGATTGGTAGGAACTTTGGGCTACTTAGCTCCTGAATACATAAGCACAGGCAGAGCCAGTAAAGAATCTGACGTATTTAGCTTTGGAGTAGTTGCTTTAGAGATTGCGACTGGAAGAATGTCGAGAACCTCCATGGAAAAGGAATCTCATAAGGGTTTGGTGGAGTGGGTTTGGGATCTTTATGGAAGTGGGCAGTTGTTTGAGGGTGTTGATGAGAAATTGCAATCTGATTGTGACAAAAAACAGGTGGAATGTTTGATGGTTGTTGGACTATGGAGTGCTTATCCAGACCCTAATCTTCGACCTTCGATAAAACAAGCAATTCAAGTTCTTAACTTTGAGACAACGACGCCAAATCTTCCAAGTAAAATGCCTGTTCCTACGTATCATGCTCCTCCCACATCGATGAGCTCAAATGAACCTTCCATTACTGTAAGTCTTGACATGGGTCGTTGA 1950 41.49 MATSLLSHLFLLLLLYFALFVDSVFFKLDPIEPNENRLLYQGDAVPSNGGVLFSDPSYTCLVGRAIYRDAVPIWDSETGKVTDFTTHFSFTIDTQHATEYGHGVVFFLAPAGFQIPPNSAGGFLGLFNKTYNDSPINQIVHVEFDSFSNEWDPKFEHVGININSLSSSNFTSWNVSLHSLDTVDVFISYDSTTKNLGVSWKHQKTSTSFENTTLSYQIDLMKVLPQWATVGFSAATGKFSERHLLFSWEFNSSLEMKQPGENNGKKVDKIVGLTVSLGVFIIIVAIIAFVVFWRLKQKKRKAGPENLEEVNLTSINDDLERGVGPRRFSHKLLAMATNNFSDERKLGQGGFGAVYRGHIPDIDLTVAVKKISRGSKQGRKEYITEVKIISRLRHRNLVQLIGWCHEKGEFLLVYEFMPNGSLDSHLFGKRNPLAWAVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRTSMEKESHKGLVEWVWDLYGSGQLFEGVDEKLQSDCDKKQVECLMVVGLWSAYPDPNLRPSIKQAIQVLNFETTTPNLPSKMPVPTYHAPPTSMSSNEPSITVSLDMGR 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 33624294 33626243 + Lag0008995.1 Lac9g1508 620434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g1508 649 MobiDBLite consensus disorder prediction 627 649 - -
Lac9g1508 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac9g1508 649 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Lac9g1508 649 FunFam L-type lectin-domain containing receptor kinase IX.1 22 263 - -
Lac9g1508 649 SMART serkin_6 340 614 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g1508 649 Pfam Legume lectin domain 34 263 IPR001220 GO:0030246(InterPro)
Lac9g1508 649 ProSiteProfiles Protein kinase domain profile. 340 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g1508 649 Pfam Protein kinase domain 341 546 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g1508 649 FunFam Lectin-domain containing receptor kinase A4.3 417 629 - -
Lac9g1508 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 254 IPR013320 -
Lac9g1508 649 SUPERFAMILY Protein kinase-like (PK-like) 324 632 IPR011009 -
Lac9g1508 649 FunFam L-type lectin-domain containing receptor kinase IX.1 325 416 - -
Lac9g1508 649 PANTHER - 55 619 IPR050528 GO:0005886(PANTHER)
Lac9g1508 649 CDD lectin_legume_LecRK_Arcelin_ConA 33 254 IPR001220 GO:0030246(InterPro)
Lac9g1508 649 Gene3D - 21 268 - -
Lac9g1508 649 ProSitePatterns Protein kinases ATP-binding region signature. 346 370 IPR017441 GO:0005524(InterPro)
Lac9g1508 649 CDD STKc_IRAK 346 610 - -
Lac9g1508 649 Gene3D Transferase(Phosphotransferase) domain 1 417 630 - -
Lac9g1508 649 MobiDBLite consensus disorder prediction 629 643 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac9g1508 Lac-Chr9:33624294 Lac9g1531 Lac-Chr9:34041418 0.00E+00 dispersed
Lac9g1508 Lac-Chr9:33624294 Lac9g1513 Lac-Chr9:33754395 0.00E+00 proximal
Lac10g2657 Lac-Chr10:40749016 Lac9g1508 Lac-Chr9:33624294 2.00E-89 transposed
Lac11g1804 Lac-Chr11:32561847 Lac9g1508 Lac-Chr9:33624294 1.90E-38 wgd
Lac8g1415 Lac-Chr8:30899266 Lac9g1508 Lac-Chr9:33624294 9.90E-97 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86427 PF00069 Pkinase 1.30E-48 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g1508 - - - 0.0