Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g1524 ATGATGGGATTTTCTGCCGCAACTGGTGCGAATTTAGAGAAACATATTCTATTTTCATGGGAATTCAACTCGAGCTTGGATATAAAGCAGACAAGTGAGGGAAATAATGGAAAAAAAGTTGGCGTAGTTGTGGCTGTAGCTGTTTCTATTGGAGGACTGGTTATCATGGCAATATTAGTATTTGGAATACTTTGGAGTTTGAAGCGAAGTACAAGAAAAGAAGAAAAGCTAGAAAATCTTGAGGAAGTAAACTTGACATCCATTAACGATGATTTGGAAAGAGGGGTCGGACCGAGGAGGTTTTCTCACGAGCTTCTTGCCATGGCCACCAACAATTTCTCAGATGAGAGGAAGCTTGGCCAAGGAGGATTTGGTGCAGTGTATAAAGGGCACATACCAGATATAGATTTGAGTGTAGCTGTAAAGAAAATCTCAAGGGGTTCTAAACAAGGAAGAAAAGAGTACATAACTGAGGTGAAGATCATTAGTAGGCTTCGACATCGCAATTTGGTGCAACTCATAGGTTGGTGCCATGAGAAGGGCGAGTTCTTGTTAGTTTATGAATTCATGCCTAATGGTAGTCTTGATTCTCATCTCTTTGGTAGGAGATGCCCTCTTGCTTGGGCTGTGAGATATAAGATTGCTTTAGGTTTAGCATCTGCGTTGTTATATCTTCATGAAGAATGGGAACAATGTGTGGTTCATAGAGATATTAAATCTAGCAATGTCATGTTAGACTCGAACTTCAATGTGAAGCTTGGAGATTTTGGGCTGGCTCGATTGATGGACCATGAGTTGGGTCCTCAAACAACTGGGTTGGTGGGAACTTGGGGCTACTTAGCACCAGAATATATAAGTACAGGTAGAGCCAGTAAAGAATCTGATGTGTTTAGCTTTGGAGTGGTTGCTTTAGAGATTGCAACTGGAAGAATGTCGAGAAACTCCATGGACGAGGAATCTCATAAGGGTTTGGTGGAGTGGGTTTGGGATCTTTATGGAAGTGGACAATTGCTTGAGGGTGTGGATGAGAAATTGCAATCTGATTATGACAAAAAACAGGTGGAATGTTTGATGGTTGTTGGACTGTGGAGTGCTTATCCGGACCCTAATCTTCGACCTTCAATAAAACAAGCAATTCAAGTTCTTAACTTTGAGACAATGATGCCAAATCTTCCAAGTAAAATGCCTGTTCCTACATACCATGCTCCTCCCATATCAACAAGCTCAAATGAACCTTCGTCTATTACCGCAAGTCTTGATATGGGTCGTTGA 1272 41.35 MMGFSAATGANLEKHILFSWEFNSSLDIKQTSEGNNGKKVGVVVAVAVSIGGLVIMAILVFGILWSLKRSTRKEEKLENLEEVNLTSINDDLERGVGPRRFSHELLAMATNNFSDERKLGQGGFGAVYKGHIPDIDLSVAVKKISRGSKQGRKEYITEVKIISRLRHRNLVQLIGWCHEKGEFLLVYEFMPNGSLDSHLFGRRCPLAWAVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGPQTTGLVGTWGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRNSMDEESHKGLVEWVWDLYGSGQLLEGVDEKLQSDYDKKQVECLMVVGLWSAYPDPNLRPSIKQAIQVLNFETMMPNLPSKMPVPTYHAPPISTSSNEPSSITASLDMGR 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 33961408 33962679 - Lag0009011.1 Lac9g1524 620450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g1524 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac9g1524 423 FunFam L-type lectin-domain containing receptor kinase IX.1 98 189 - -
Lac9g1524 423 MobiDBLite consensus disorder prediction 402 417 - -
Lac9g1524 423 Gene3D Transferase(Phosphotransferase) domain 1 190 403 - -
Lac9g1524 423 ProSitePatterns Protein kinases ATP-binding region signature. 119 143 IPR017441 GO:0005524(InterPro)
Lac9g1524 423 CDD STKc_IRAK 119 383 - -
Lac9g1524 423 SUPERFAMILY Protein kinase-like (PK-like) 97 404 IPR011009 -
Lac9g1524 423 ProSiteProfiles Protein kinase domain profile. 113 391 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g1524 423 MobiDBLite consensus disorder prediction 401 423 - -
Lac9g1524 423 SMART serkin_6 113 387 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g1524 423 PANTHER - 2 392 IPR050528 GO:0005886(PANTHER)
Lac9g1524 423 FunFam Lectin-domain containing receptor kinase A4.3 190 402 - -
Lac9g1524 423 Pfam Protein kinase domain 114 380 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g1524 423 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 133 IPR013320 -
Lac9g1524 423 Gene3D Phosphorylase Kinase; domain 1 98 189 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac9g1524 Lac-Chr9:33961408 Lac10g0993 Lac-Chr10:7965531 3.80E-70 dispersed
Lac9g1524 Lac-Chr9:33961408 Lac9g1531 Lac-Chr9:34041418 9.70E-207 proximal
Lac9g1241 Lac-Chr9:28812375 Lac9g1524 Lac-Chr9:33961408 4.40E-08 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86430 PF00069 Pkinase 2.00E-49 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g1524 - - - 0.0