Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g1531 ATGTCAAGTCCTCTCCTTTTCCTTCTTCTCCATCTTTACTTTCTTCCATTCTCTATTGACTCAGTTTCTTTCAAAATAGATCGGTTCAAGTCCAATGAAAGCGAAACACTTTACCAAGGAGATGCCATTCCTTCTGTTGGAGCTGTCGAATTCAACAACATTAACTATCTCTGTCGTGTCGGTTGGGTTATCTACAAGGATATCGTTCCAATTTGGGATTCTAAAACAGGAAAAGCCACTGATTTCACGACCCATTTCACCTTTTCAATCGATACTCGAACTGCAGCAAACTACGGCCATGGAGTGGCTTTCTTTCTAGCTCCAGCTGGGTTTCAAATCCCTCCCAACTCAGCTGGTGGATTTCTTGGCCTTTTCAACACCACCAACAGTGACTCCACCATCAACCAGATCGTTCACGTAGAGTTCGATTCTTTCTCCAATCAAGAATGGGATCCTCCGTTTGAACATGTGGGCATAAACGTTAACTCGATTGCTTCTTCTAATTACACTCGTTGGAATGCCAGTTCACACAGTGGGGACGTTGCCGATGCGTGGATCTCCTACAATTCAACTACAAAAAACTTGAGCGTTTCGTGGAAGTACCAAAATTCATCCAACTCGTTTCAAAATTCCACCTTGAGTTACCAGATTGATCTTGTGAAGGTTCTTCCCCAGTGGGCGACCGTGGGATTCTCAGCTGCAACTGGTATGTATGTAGAGAGACATACGTTGTTTTCATGGGAGTTCAACTCGAGCTTGGATGTGAATCAAATGAGTGAAGATAACGGGAATAAAGTTAATATAATTGTGGGTGTGACCGTTTCGATAGGAGTTTTAATTCTCATGGCAGTGGTAGGATTTGTAGTGCTTTGGAGATTGAAGCAAAAGAGAAGAAAATCAGAAGAAAACGTTGATGAGGTAAACTTGACGTCCATTAACGATGATTTGGAAAGAGGGGTTGGACCGAGAAGGTTTTCTCGCAAGCTTCTTGCCATGGCCACCAACAACTTCTCAAACGAAAGGAAGCTGGGTGAAGGAGGATTTGGTGCAGTGTACAGAGGGTACGTACCAGATTTGGATTTGACAATAGCTGTGAAGAAAATCTCAAGGGGTTCGAGACAGGGAAGAAAAGAATACATAACTGAGGTGAAGATCATCAGTAGGCTTCGCCATCGCAATTTGGTTCAACTCATTGGTTGGTGTCATGATAAAGGTGAGTTCTTGCTGGTTTATGAATTCATGCCTAATGGTAGCCTTGATTCTCATCTCTTTGGCAAGAGAAGCCCTCTTGCTTGGGCTGTGAGATATAAGATTGCTTTAGGTTTAGCATCTGCGTTGTTATATCTTCATGAAGAATGGGAACAATGCGTGGTTCATAGAGATATTAAATCCAGCAATGTCATGTTAGACTCGAACTTCAATGTGAAGCTTGGAGATTTTGGGCTGGCTCGATTGATGGACCATGAATTGGGTGCTCAAACAACTGGATTGGTAGGAACTTTGGGCTACTTAGCTCCTGAATACATAAGCACGGGCAGAGCCAGTAAAGAATCTGATGTGTTTAGCTTTGGAGTGGTTGCTTTAGAGATTGCAACTGGAAGAATGTCGAGAAACTCCATGGAAGAGGAATCTCATAAGGGTTTGGTGGAGTGGGTTTGGGATCTTTATGGGAGTGGAAAGCTTCTTATGGGTATGGATGAGAAACTGCAGTCTGATTATGATAAAAAACAAGTTGAGTGTTTGATGCTCGTTGGGCTTTGGAGTGCTTATCCAGACCCTAATCTCAGACCTTCAATAAGACAAGTGATTCAAGTTCTTAATTTTGAGACGACGATGCCAAATCTTCCAAGTAAAATGCCGGTTGCTGTGTATCATGCTCCTTCTACGTCGATGAGCTCAAATGAACCTTCCATTACTGTAAGTCTCGACGTGGGTCGTTGA 1941 42.92 MSSPLLFLLLHLYFLPFSIDSVSFKIDRFKSNESETLYQGDAIPSVGAVEFNNINYLCRVGWVIYKDIVPIWDSKTGKATDFTTHFTFSIDTRTAANYGHGVAFFLAPAGFQIPPNSAGGFLGLFNTTNSDSTINQIVHVEFDSFSNQEWDPPFEHVGINVNSIASSNYTRWNASSHSGDVADAWISYNSTTKNLSVSWKYQNSSNSFQNSTLSYQIDLVKVLPQWATVGFSAATGMYVERHTLFSWEFNSSLDVNQMSEDNGNKVNIIVGVTVSIGVLILMAVVGFVVLWRLKQKRRKSEENVDEVNLTSINDDLERGVGPRRFSRKLLAMATNNFSNERKLGEGGFGAVYRGYVPDLDLTIAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHLFGKRSPLAWAVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRNSMEEESHKGLVEWVWDLYGSGKLLMGMDEKLQSDYDKKQVECLMLVGLWSAYPDPNLRPSIRQVIQVLNFETTMPNLPSKMPVAVYHAPSTSMSSNEPSITVSLDVGR 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34041418 34043358 - Lag0009018.1 Lac9g1531 620457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g1531 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac9g1531 646 FunFam L-type lectin-domain containing receptor kinase IX.1 322 413 - -
Lac9g1531 646 PANTHER - 47 616 IPR050528 GO:0005886(PANTHER)
Lac9g1531 646 ProSiteProfiles Protein kinase domain profile. 337 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g1531 646 ProSitePatterns Protein kinases ATP-binding region signature. 343 367 IPR017441 GO:0005524(InterPro)
Lac9g1531 646 SMART serkin_6 337 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g1531 646 SUPERFAMILY Protein kinase-like (PK-like) 321 628 IPR011009 -
Lac9g1531 646 Gene3D Transferase(Phosphotransferase) domain 1 414 628 - -
Lac9g1531 646 Pfam Legume lectin domain 22 260 IPR001220 GO:0030246(InterPro)
Lac9g1531 646 CDD TM_EGFR-like 268 301 - -
Lac9g1531 646 Pfam Protein kinase domain 338 604 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g1531 646 CDD STKc_IRAK 343 607 - -
Lac9g1531 646 FunFam Lectin-domain containing receptor kinase A4.3 414 626 - -
Lac9g1531 646 Gene3D - 19 268 - -
Lac9g1531 646 Gene3D Phosphorylase Kinase; domain 1 322 413 - -
Lac9g1531 646 FunFam L-type lectin-domain containing receptor kinase IX.1 20 262 - -
Lac9g1531 646 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 255 IPR013320 -
Lac9g1531 646 CDD lectin_legume_LecRK_Arcelin_ConA 22 253 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g1855 Lac-Chr5:36780529 Lac9g1531 Lac-Chr9:34041418 9.20E-169 dispersed
Lac9g1508 Lac-Chr9:33624294 Lac9g1531 Lac-Chr9:34041418 0.00E+00 dispersed
Lac9g1513 Lac-Chr9:33754395 Lac9g1531 Lac-Chr9:34041418 0.00E+00 dispersed
Lac9g1515 Lac-Chr9:33777166 Lac9g1531 Lac-Chr9:34041418 6.20E-75 dispersed
Lac9g1517 Lac-Chr9:33816398 Lac9g1531 Lac-Chr9:34041418 4.30E-294 dispersed
Lac9g1531 Lac-Chr9:34041418 Lac2g1159 Lac-Chr2:9315876 7.20E-68 dispersed
Lac9g1524 Lac-Chr9:33961408 Lac9g1531 Lac-Chr9:34041418 9.70E-207 proximal
Lac9g1525 Lac-Chr9:33962775 Lac9g1531 Lac-Chr9:34041418 1.20E-77 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86431 PF00069 Pkinase 1.50E-48 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g1531 - - - 0.0