Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g1594 ATGATAATTCGATATCGTGTTTGGGGTGCGGTCCAAAACGACTCGAGAATTGCCGCATCACTGTTGCGGTTGCAATTCCACGATTATCGGTCGATTGCTTGTCTTTTTGGTTTCGCTGTTCTAGGATGCGATGCGTCGGTGTTGCTTGACGATACAAAGGACATGAAAGGTGAGAAAAAAGCACCAGGCAATGTGAACTCACTTAGAGGGTTTGAAGTGATTGATGCCATAAAAGCAGATGTAGAAACATATTGCCCAGAAACAGTTTCATGTGTTGATATATTGGGTCTTGCCGCTAGAGAAGCTGTGTATCTGGTCGGAGGACCATCGTGGAACCTCCCACTAGGACGTAGAGATGGCTTAACCGCAAACATAAAATCAGTGTTGGAACAGCTGCCATCCCCCAAGGCATCTCTAGAGAACAATACAGCCAAGTTCATCTCAAAGGGCCTCGACTTAAAGGACCTCGTCGTGCTTTCAGGCGCGCACACGATCGGGTTCGCCCGCTGCGTGACATTCAAGGGCCGGCTCTTCAACTACAAGGGCTCCGGCCAGGCGGACCCTGACATCAACGCGGCCATGCTGACGGAGCTGCGGACCACGTGCCCCAACAGAAACGACGGCACCAACGCCAACTTGGCCCCGCTGGATGTGGCCAGTTTCGACAGGTTTGACAACGAGTACTACACCAATCTGATTGGCGGTGTTGGGCTTTTGGAGTCGGACCAGGGTCTGATGGCCGACCCACAGACGGCTTCCTTGGTCAGAGATTACAGTTTCGATACGAATTTGTTCTTCGATGACTTTGCGGAGTCCATGACGAGGATGAGCTTGGTTGGCGTTCTCACTGGCCGCAATGGCCAGATCCGAAAGGAATGTCACGTTGTTAATGTCGATGATGGCTATTGA 909 51.27 MIIRYRVWGAVQNDSRIAASLLRLQFHDYRSIACLFGFAVLGCDASVLLDDTKDMKGEKKAPGNVNSLRGFEVIDAIKADVETYCPETVSCVDILGLAAREAVYLVGGPSWNLPLGRRDGLTANIKSVLEQLPSPKASLENNTAKFISKGLDLKDLVVLSGAHTIGFARCVTFKGRLFNYKGSGQADPDINAAMLTELRTTCPNRNDGTNANLAPLDVASFDRFDNEYYTNLIGGVGLLESDQGLMADPQTASLVRDYSFDTNLFFDDFAESMTRMSLVGVLTGRNGQIRKECHVVNVDDGY 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35150553 35152135 - Lag0009081.1 Lac9g1594 620520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g1594 302 Pfam Peroxidase 4 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 ProSitePatterns Peroxidases proximal heme-ligand signature. 155 165 IPR019793 -
Lac9g1594 302 Gene3D - 2 297 - -
Lac9g1594 302 Gene3D Peroxidase, domain 2 133 276 - -
Lac9g1594 302 PANTHER PEROXIDASE 72-RELATED 2 296 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 PRINTS Haem peroxidase superfamily signature 18 32 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 PRINTS Haem peroxidase superfamily signature 217 232 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 SUPERFAMILY Heme-dependent peroxidases 2 297 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 PRINTS Plant peroxidase signature 88 98 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 PRINTS Plant peroxidase signature 215 230 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 PRINTS Plant peroxidase signature 154 166 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 PRINTS Plant peroxidase signature 69 82 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 PRINTS Plant peroxidase signature 107 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 PRINTS Plant peroxidase signature 271 284 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 PRINTS Plant peroxidase signature 231 248 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 PRINTS Plant peroxidase signature 20 40 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 ProSiteProfiles Plant heme peroxidase family profile. 1 297 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g1594 302 CDD secretory_peroxidase 2 296 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac9g1594 302 FunFam Peroxidase 133 276 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac9g1594 Lac-Chr9:35150553 Lac9g2881 Lac-Chr9:46741595 6.30E-75 dispersed
Lac1g2545 Lac-Chr1:46818589 Lac9g1594 Lac-Chr9:35150553 1.40E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g1594 K00430 - csv:101209504 498.434