Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac9g1614 | ATGCCGCGCCCTTATTTCCACAAGCTTGTTCTCTCCTCCACTATTCAAGCTAGGAAATTGAGAATCCCTGAGACTTTTGTCAGGATGATCAGGGATGAGCTTTCTGCAGTTGCAACACTTACTGTTCCTGACGGTCATGTTTGGCGTGTGGGGTTGAGGAAAACTGATAATAAATTTTGGTTTGAAGATGGTTGGCATGGATTTCTCGAGCATTATGCCATACGGGTTGGATTTTTATTAGTATTCAGATATGAGGGAAACTCAGCATTCTGTGTTTTTATCTTTAATCTTAATACATCTGAAATAAACTACCAATCTGCTGCTCTCGGTAGTAATCAAAGGAATAATTACAGCATTCAAAACCGAATCTTTGAAGAAATGGAGGATTATGACATTCCTGAAGCTATTCCTTCCAATCAGTCCATGAATTCTGGTTCTTTACGAAACAAGCTATTTGGAGATGAATGGAATCTGCACCAATCAAAATCTGCAAGTACGTTGCAAGCCGAATACTTATCTACTCGAGATATTGGGGTTCAGTTTAGTGCTGTAGAGGTTAAAAAATCTGCAGATGAGGTGAGATTTCAGAATTTGGGTGATGATGGACACAGACCTAAAAAAAGTGGAGGCAAAAAGAGGAAAATTGATTCTAGCGAGCACCATCCATCTGCTCATAATAGTGAAGATTTAGGAGACATTCGCTTTAGATTTTATGAAAGTGCTTCTGCTAGGAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGAGCTATCAACGCTGCAAAGGCTTTCGAGCCTGCTAATCCTTTCTGCAGGGTTGTCTTGCGACCATCTTATCTATACAGAGGTTGCATAATGTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGTGGAGTTTCAGGATTCATCAAACTTCAGACACCTGATGGTAGACAGTGGCCGGTCCGATGTCTTTATAAAGTTGGTAGAGCCAAGTTAAGTCAGGGATGGTATGAGTTTTGCCTGGAAAATAATTTAGGGGAGGGCGATGTTTGTGTGTTTGAGCTTCTCAGGATGAGAGAAATTGTGCTCAAAGTTACCATGTTTCGTGTCATTGAAGATGCTGGACGAATGGTAAACCCGAATCCTCCTAGCATGATGAATCCACCTCCGCTGCGAAGTGTTAGCCAAATTAAGCTGATCAGAAATTAA | 1191 | 40.81 | MPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSAVATLTVPDGHVWRVGLRKTDNKFWFEDGWHGFLEHYAIRVGFLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGSNQRNNYSIQNRIFEEMEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNLHQSKSASTLQAEYLSTRDIGVQFSAVEVKKSADEVRFQNLGDDGHRPKKSGGKKRKIDSSEHHPSAHNSEDLGDIRFRFYESASARKRTVTAEERERAINAAKAFEPANPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVIEDAGRMVNPNPPSMMNPPPLRSVSQIKLIRN | 396 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 35401561 | 35404620 | + | Lag0009101.1 | Lac9g1614 | 620540 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac9g1614 | 396 | Gene3D | - | 1 | 99 | IPR015300 | - | |
Lac9g1614 | 396 | SUPERFAMILY | DNA-binding pseudobarrel domain | 3 | 98 | IPR015300 | - | |
Lac9g1614 | 396 | CDD | B3_DNA | 268 | 363 | IPR003340 | GO:0003677(InterPro) | |
Lac9g1614 | 396 | Gene3D | - | 247 | 367 | IPR015300 | - | |
Lac9g1614 | 396 | MobiDBLite | consensus disorder prediction | 195 | 228 | - | - | |
Lac9g1614 | 396 | ProSiteProfiles | B3 DNA-binding domain profile. | 5 | 98 | IPR003340 | GO:0003677(InterPro) | |
Lac9g1614 | 396 | SUPERFAMILY | DNA-binding pseudobarrel domain | 265 | 366 | IPR015300 | - | |
Lac9g1614 | 396 | CDD | B3_DNA | 4 | 96 | IPR003340 | GO:0003677(InterPro) | |
Lac9g1614 | 396 | SMART | B3_2 | 6 | 98 | IPR003340 | GO:0003677(InterPro) | |
Lac9g1614 | 396 | SMART | B3_2 | 270 | 365 | IPR003340 | GO:0003677(InterPro) | |
Lac9g1614 | 396 | PANTHER | B3 DOMAIN-CONTAINING | 3 | 350 | IPR050655 | - | |
Lac9g1614 | 396 | ProSiteProfiles | B3 DNA-binding domain profile. | 270 | 365 | IPR003340 | GO:0003677(InterPro) | |
Lac9g1614 | 396 | Pfam | B3 DNA binding domain | 7 | 96 | IPR003340 | GO:0003677(InterPro) | |
Lac9g1614 | 396 | Pfam | B3 DNA binding domain | 272 | 363 | IPR003340 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac5g2734 | Lac-Chr5:45783864 | Lac9g1614 | Lac-Chr9:35401561 | 1.90E-35 | dispersed | |
Lac9g1614 | Lac-Chr9:35401561 | Lac9g1615 | Lac-Chr9:35411358 | 2.00E-57 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
24423 | PF02362 | B3 | 5.30E-18 | CL0405 | Lac | TF |
Pathway information
