Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g1665 ATGTCGGATTCTCCACCTCCTTCTTCTTCCGATTCCGATTCCGATTCCTCTTCCTCTCCCCCGCCCCCCTCTGACTCTTCTCCACCTCCCGCCGCTTCTCCGCCCCCGGATGCTTCTCCGCCTCCGCCCGATTCCTCCCCTCCTCCGCCCGATTCCTCTCCACCTCCGCCCGATGACTCCTCTTCTCCACCTCCGCCGACTGCATCACCGCCGCCTCCCGACTCCGACTCCGACTCCTCCTCCCCCTCGCCTCCCAAAGATTCCTCTTCCCCACCGCCACCGCCCAAGGACTCGAAGTCTCCGTCGTCTCCTCCCTCTCCTTCTCCGCCGCCGCCTCCGCCACCTCCACCGCCGCCGCCTCCTTCGCCACCCGGATCCCCTTCTAGGCATTCTCCTCCATCTCCCCGATCGATCTCCTCCCCGCCTAATTCCCGATCGTCAGACTCCTCGGGCGGCGGGTCTACGCCCCAGGCGGTGCCGATCATTGTAGGAGTGGCGGTGGCGGCTGGTTTTTTGCTATTCGCCATGGCGTTGATATTCTTCGCTTGCACAAGAAAGAAAAAGAAGAGAAGTAATAATTCCATGTATTACGATGATCAGCCTGGTCCAAAAGGTGGAGATCCATATTACAACGGAAGGAATAACAACTGGAACAACCCGAGCGAACACTTCGTGAACATGCCGCCAATCAGCGGCGGAGGTCAAGGAGGAGGAGGAGGAGGAGGAGGATGGCCGTCGCCGCCACCGCCGCCGCCGCCAGGATTAGTGAGCAGTGACATGAGCTCCAATTTCTCAGGGCCACACGGGCCGCCGTTGCCGCCGCCGCACCCGTCGGTGGCGCTGGGGTTCAACAAGAGCACGTTCACGTACGACGAGCTGGTGGCGGCGACGGGAGGATTCTCTCCGGCCAACTTGCTGGGGCAAGGGGGATTCGGGTACGTTCATAAAGGATTGCTGCCCAACGGCAAGGAAATCGCAGTGAAAAGCCTGAAAACGGGTAGCGGCCAAGGAGATCGGGAATTCGCGGCGGAAGTGGAGATCATCAGCCGCGTCCACCACCGCCATTTGGTCTCCCTCGTCGGATATTGCATCTCCGGTGACCGGAAGATGTTGGTTTACGAATTTGTTCCTAATAACAACCTCGAATTCCACCTCCACGGAAAGGGACGGGCACCAATGGACTGGTCAACGAGGGTCAAAATTGCATTGGGCTCAGCCAAGGGCCTGGCCTATCTCCACGAAGACTGTCATCCTCGCATCATCCATAGAGACATCAAGACTGCAAATATTCTTATAGACATGAGTTTCGAAGCCAAGGTGGCCGATTTCGGATTGGCAAAGCTCAACCAGGACAATTACACTCACGTATCCACTCGCGTTATGGGCACATTTGGATATTTGGCTCCGGAGTACGCATCAAGTGGGAAGCTAACAGAGAAATCAGATGTATTCTCATATGGAGTAATGCTTTTGGAACTGATAACCGGAAGACGACCGGTGGACCCGACCGGGGACATGGAGGACAGCTTAGTGGACTGGTCGAGACCTCTTTGCTTGAAATCAATGGGTGATGGAAACTACGAGGAGTTGGCTGATCCACGGCTAGAGAAGAACTTCGATGTCCAGGAAATGATTCGCATGGTCGCTTGCGCCGGTGCTTGCATTCGCCATTCGGCTAGACGCCGTCCCAAAATGAGCCAGGTCGTACGAGCACTCGAAGGCGACGTGTCGCTAGAGGATTTGAACGACGGAGTAAAGCCAGGGCAGAGCTCGTACTTCGGGTCTGGCACGTCGTCCGAGTACGACGCTAGCTCGTACAGCGCCGACATGAAAAGGTTTAGAAAGGTAGCGTTGGACAGCCGTGAGTACACGAGTAGTGACTACGGCGGCACGAGCGAGTACGGGCTAAACCCATCCTCAACGAGCAGCGACAACAGCCAGAAGCCTAGTCACCAGGCTTCCCCCAATTTACCGCCCAACAATCCCTAA 1989 57.11 MSDSPPPSSSDSDSDSSSSPPPPSDSSPPPAASPPPDASPPPPDSSPPPPDSSPPPPDDSSSPPPPTASPPPPDSDSDSSSPSPPKDSSSPPPPPKDSKSPSSPPSPSPPPPPPPPPPPPPSPPGSPSRHSPPSPRSISSPPNSRSSDSSGGGSTPQAVPIIVGVAVAAGFLLFAMALIFFACTRKKKKRSNNSMYYDDQPGPKGGDPYYNGRNNNWNNPSEHFVNMPPISGGGQGGGGGGGGWPSPPPPPPPGLVSSDMSSNFSGPHGPPLPPPHPSVALGFNKSTFTYDELVAATGGFSPANLLGQGGFGYVHKGLLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGYCISGDRKMLVYEFVPNNNLEFHLHGKGRAPMDWSTRVKIALGSAKGLAYLHEDCHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNYTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLELITGRRPVDPTGDMEDSLVDWSRPLCLKSMGDGNYEELADPRLEKNFDVQEMIRMVACAGACIRHSARRRPKMSQVVRALEGDVSLEDLNDGVKPGQSSYFGSGTSSEYDASSYSADMKRFRKVALDSREYTSSDYGGTSEYGLNPSSTSSDNSQKPSHQASPNLPPNNP 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36012322 36016754 + Lag0009152.1 Lac9g1665 620591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g1665 662 SUPERFAMILY Protein kinase-like (PK-like) 275 572 IPR011009 -
Lac9g1665 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac9g1665 662 Gene3D Phosphorylase Kinase; domain 1 277 375 - -
Lac9g1665 662 MobiDBLite consensus disorder prediction 140 155 - -
Lac9g1665 662 SMART serkin_6 300 572 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g1665 662 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 127 616 IPR047117 -
Lac9g1665 662 MobiDBLite consensus disorder prediction 624 654 - -
Lac9g1665 662 FunFam proline-rich receptor-like protein kinase PERK1 278 375 - -
Lac9g1665 662 ProSiteProfiles Protein kinase domain profile. 300 578 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g1665 662 MobiDBLite consensus disorder prediction 579 605 - -
Lac9g1665 662 MobiDBLite consensus disorder prediction 1 20 - -
Lac9g1665 662 FunFam Proline-rich receptor-like protein kinase PERK1 376 583 - -
Lac9g1665 662 MobiDBLite consensus disorder prediction 588 605 - -
Lac9g1665 662 Pfam Protein tyrosine and serine/threonine kinase 305 572 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac9g1665 662 MobiDBLite consensus disorder prediction 1 155 - -
Lac9g1665 662 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524(InterPro)
Lac9g1665 662 MobiDBLite consensus disorder prediction 189 278 - -
Lac9g1665 662 Gene3D Transferase(Phosphotransferase) domain 1 376 583 - -
Lac9g1665 662 MobiDBLite consensus disorder prediction 621 662 - -
Lac9g1665 662 MobiDBLite consensus disorder prediction 21 139 - -
Lac9g1665 662 MobiDBLite consensus disorder prediction 211 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0903 Lac-Chr3:7322582 Lac9g1665 Lac-Chr9:36012322 1.80E-157 dispersed
Lac4g1479 Lac-Chr4:33359712 Lac9g1665 Lac-Chr9:36012322 1.40E-37 dispersed
Lac5g1610 Lac-Chr5:32801458 Lac9g1665 Lac-Chr9:36012322 2.50E-61 dispersed
Lac5g2063 Lac-Chr5:39108611 Lac9g1665 Lac-Chr9:36012322 1.50E-163 dispersed
Lac6g2998 Lac-Chr6:47585561 Lac9g1665 Lac-Chr9:36012322 3.80E-157 dispersed
Lac8g2805 Lac-Chr8:45266396 Lac9g1665 Lac-Chr9:36012322 4.60E-122 dispersed
Lac9g1665 Lac-Chr9:36012322 Lac9g2257 Lac-Chr9:41932067 1.60E-75 dispersed
Lac5g2874 Lac-Chr5:46972873 Lac9g1665 Lac-Chr9:36012322 9.30E-73 transposed
Lac1g2481 Lac-Chr1:46243453 Lac9g1665 Lac-Chr9:36012322 4.90E-26 wgd
Lac4g1495 Lac-Chr4:33581982 Lac9g1665 Lac-Chr9:36012322 1.20E-77 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86433 PF07714 PK_Tyr_Ser-Thr 2.50E-46 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g1665 - - - 0.0