Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac9g1723 | ATGGCTACCTACTACTCTAGTTCGAATAACGAAAGGGATGCTACTCCTATCCTCTATCCAAGGGGAGCTTTGCTCGGTTCGTATGAGGAAACGCCAGTACTTCCCCGGAATATGATGATGCATGTAAATTCTGGTACATACATGGACTCGTTGCCTTCACAGGCGCAAAATGGTTGTGGTCAGATAGCATCGGCTGGAGCAGCAGGAACCACCCAACAGCAGCAAGAGTTTTTATCAAATCTTGGTGGTTCGCAAATTGCTGAGCATGATTTCAATACATGGAGAGAGGACAGGAGTGAAATGCTTGGTACGAACTCGATGCGTGGCCCTACCAATGTTCTTCATGGAGGGCAAAATTTGCAGGGTCAGGGGTTATCCCTTACTCTCAGTACACAAATCCCATCTGGAATCCAGATACCTTCAATCACATATAGGAATTCGGATATGGGTTTAACTTCATTCTTGAGTCCTAATCCAACGAATTCAGGTGAGGATGGCTGCAGAAATGGCGCTTCTCGAGACGACCAGTTGAGAAGTGGAGAAAACTTGCCACCTAATTTTCAAGAATTGGCTAAGGGTGACTTATCTCAATACAGCATGTCTAGTATTGCAAGAACTATGCCCAATTCGAAGTACCTTAAGGCTGCACAACAACTACTTGATGAAGTTGTTAATGTCAGGAAAGCTTTGAAGCGACCTAATAATGAGAGAAACCAGAGCCCACATGAGCATGAAACTAGGAGTGCAAAGAATGGTGATGCAGGAACCAAAAATGACAGTTCCTTGCTCACTGCGAGCGGAGTGTCTTCAAACCCTCAAGAAATTGGGAGCAATTCAACATGTGAGCTCTCGCATGCCGAAAAACAGGATTTGCAGAACAAGATGACAAAGCTTTTATACATGTTGGATGAGGTTGATAGAAGGTACAATCAGTATTATCACCAGATGCAGATTGTGGTGTCATCATTTGATGTGATAGCCGGATGTGGGGCATCTAAGCCATATACTGCACTTGCACTCCAAACTATTTCTCGTCATTTTCGGTGCTTACGGGATGCAATAGCTGGTCAAGTAAGAGCTACTCGTAAAAGCCTGGGAGAGCATGAAAATTCTGGAAATGACAAGGGAGTCGGAATCACTCGTCTCCGATATGTGGATCAGCAATTAAGGCAACAAAGGGCTCTTCAGCAGCTTGGTATGATACAGCAGCATGCATGGAGGCCTCAAAGAGGGTTGCCTGAGAACTCTGTTTCGATTCTCCGGGCCTGGCTGTTTGAGCACTTCCTTCATCCGTATCCAAAGGATTCTGATAAGATCATGCTTGCAAGGCAAACAGGCTTGACTAGAAGTCAGGTCTCTAATTGGTTTATCAATGCACGTGTGCGTCTTTGGAAACCTATGGTAGAGGAGATGTACAAGGAAGAGATAGGCAGTGCAGAAATGGACTCTATATCATCATCTGAAAATGCTGGCAAAGCAACAAAAGGAGATAACAGGACCTTTGAGGATGATAAAGAGGAGGATCTGCAACAAAGTGCAAGTTCAACAGCCACCGAAAGATGCAGCGCCGGAGACATTAACGACTTAAAATCTGATCAAGCATCTAATCTTGGAAATTCAGGTTCCACGAGACTAGCCAATTTCCAAAATGGTGCTCATATCGAATCCCAAAACGAGCTGGTAAAGTCGAGGGAGGAGCTGAGGCCGAATGTAAATAACTCTAATTTCTTTCCCGATACAATTGTCCACTCTCAGGCAGGGAGTGACAGGTTTATGGCTGCCGCTGCTGCCTATCACATGTCTGAATTGGGAAGGTTCGGGACGGTTAGCGGGGTATCACTGACGTTGGGTTTGCAGCATTGTGAGGGTGGTAGCATACCTATGCCTGCTGGGACACACCACGGTTTTGCAGCCATGAGAGGAGAGGATATGTACAACACCGCCGCATCTTCTCTCGGGGAAACAGTCCATTTTGAATGCGTAAATGCTGGTAATCCGCAACCGAGGTTCGGCCCTTCTCATCTCTATCATGATTTGTTGTGTAAAAGTGCAACTGTACAAGATTGCTGGTCTGCATCATATACTAGATGA | 2091 | 45.53 | MATYYSSSNNERDATPILYPRGALLGSYEETPVLPRNMMMHVNSGTYMDSLPSQAQNGCGQIASAGAAGTTQQQQEFLSNLGGSQIAEHDFNTWREDRSEMLGTNSMRGPTNVLHGGQNLQGQGLSLTLSTQIPSGIQIPSITYRNSDMGLTSFLSPNPTNSGEDGCRNGASRDDQLRSGENLPPNFQELAKGDLSQYSMSSIARTMPNSKYLKAAQQLLDEVVNVRKALKRPNNERNQSPHEHETRSAKNGDAGTKNDSSLLTASGVSSNPQEIGSNSTCELSHAEKQDLQNKMTKLLYMLDEVDRRYNQYYHQMQIVVSSFDVIAGCGASKPYTALALQTISRHFRCLRDAIAGQVRATRKSLGEHENSGNDKGVGITRLRYVDQQLRQQRALQQLGMIQQHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEIGSAEMDSISSSENAGKATKGDNRTFEDDKEEDLQQSASSTATERCSAGDINDLKSDQASNLGNSGSTRLANFQNGAHIESQNELVKSREELRPNVNNSNFFPDTIVHSQAGSDRFMAAAAAYHMSELGRFGTVSGVSLTLGLQHCEGGSIPMPAGTHHGFAAMRGEDMYNTAASSLGETVHFECVNAGNPQPRFGPSHLYHDLLCKSATVQDCWSASYTR | 696 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 36821664 | 36824755 | - | Lag0009210.1 | Lac9g1723 | 620649 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac9g1723 | 696 | Gene3D | - | 401 | 480 | - | - | |
Lac9g1723 | 696 | MobiDBLite | consensus disorder prediction | 231 | 286 | - | - | |
Lac9g1723 | 696 | FunFam | BEL1-like homeodomain protein 4 | 409 | 471 | - | - | |
Lac9g1723 | 696 | MobiDBLite | consensus disorder prediction | 511 | 550 | - | - | |
Lac9g1723 | 696 | MobiDBLite | consensus disorder prediction | 153 | 192 | - | - | |
Lac9g1723 | 696 | ProSiteProfiles | 'Homeobox' domain profile. | 403 | 466 | IPR001356 | GO:0003677(InterPro) | |
Lac9g1723 | 696 | SMART | prehox3 | 201 | 356 | IPR006563 | - | |
Lac9g1723 | 696 | MobiDBLite | consensus disorder prediction | 153 | 167 | - | - | |
Lac9g1723 | 696 | SUPERFAMILY | Homeodomain-like | 407 | 473 | IPR009057 | - | |
Lac9g1723 | 696 | SMART | HOX_1 | 406 | 470 | IPR001356 | GO:0003677(InterPro) | |
Lac9g1723 | 696 | MobiDBLite | consensus disorder prediction | 478 | 550 | - | - | |
Lac9g1723 | 696 | MobiDBLite | consensus disorder prediction | 480 | 494 | - | - | |
Lac9g1723 | 696 | MobiDBLite | consensus disorder prediction | 253 | 286 | - | - | |
Lac9g1723 | 696 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 150 | 503 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Lac9g1723 | 696 | Pfam | Homeobox KN domain | 423 | 462 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Lac9g1723 | 696 | Pfam | Associated with HOX | 208 | 355 | IPR006563 | - | |
Lac9g1723 | 696 | CDD | homeodomain | 406 | 467 | IPR001356 | GO:0003677(InterPro) | |
Lac9g1723 | 696 | MobiDBLite | consensus disorder prediction | 231 | 252 | - | - | |
Lac9g1723 | 696 | MobiDBLite | consensus disorder prediction | 495 | 510 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac1g2488 | Lac-Chr1:46314448 | Lac9g1723 | Lac-Chr9:36821664 | 1.00E-64 | dispersed | |
Lac4g2798 | Lac-Chr4:46677984 | Lac9g1723 | Lac-Chr9:36821664 | 5.50E-93 | dispersed | |
Lac6g0198 | Lac-Chr6:1548481 | Lac9g1723 | Lac-Chr9:36821664 | 2.10E-35 | dispersed | |
Lac7g2385 | Lac-Chr7:40457944 | Lac9g1723 | Lac-Chr9:36821664 | 7.30E-63 | dispersed | |
Lac9g0810 | Lac-Chr9:17043637 | Lac9g1723 | Lac-Chr9:36821664 | 5.30E-72 | dispersed | |
Lac9g1723 | Lac-Chr9:36821664 | Lac9g2737 | Lac-Chr9:45532646 | 2.30E-80 | dispersed | |
Lac9g1723 | Lac-Chr9:36821664 | Lac10g2756 | Lac-Chr10:42068568 | 5.30E-85 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
24428 | PF07526 | POX | 5.20E-51 | No_clan | Lac | TF |
Pathway information
