Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g1791 ATGGCGGCAACTATGTCACCGTGGGGCAAGCCCGGAGCTTGGGCTTTGGATGCGGAGGAGCACGAGGCCGAGCTTCTCAAGGACCAGCAGGACCAATCCCGCCAGCAATCGGAACCCAGTGCTGATTTTCCGTCCCTCGCCGCCGCTGCCGCCACCAAGCCCAAGAAGAAGAAAGGTCAGCCCATTACCCTCTCGGAGTTTCAGAGCTATGGCGGTCCTAAGCCCTCGGCTCAATCCAGTGAGCCAAAGGGTCTTACGACCGAAGATCTCATGATGCTTCCGACGGGCCCGCGTCAGCGAACGGCGGAGGAGCTGGACCGAAACCGGCTCGGAGGAGGTTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGATTCGTCGAATTCTCGACGGGGTTCTAGGGTTTTTGATGACTCGAGGAGGAGTAACGATGGATCCAATAGGGAATTCAGAAGGGAACCGTTGCCCTCTAGGGCTGATGAGATCGATGATTGGGGCGCCGGGAAGAAGCCTATGATGGGTAATGGGTTTGAGAGGAGGGAGAGGGGAGGAGGAGGTTTTTTCGATTCGCATTCTTCGAAAGCGGATGAATCGGATAGTTGGGTATCAAATAAGAGCTTTTCGCCTTCTGAGGGTCGGAGATCAGGCGGTATAGGTGGCGGGTTTGAGAGAGAGCGAAGAGGAGGATTTCCCTCGAACGGTGGTGGCGCCGATTCGGACAATTGGGGCAGAAAATCAGAAGGGGCTAGAGGTGGAATTGGCGAGAACGGTGGTGGGGCTGATTCGGATAATTGGGGAAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCAATCCCTTTGAACAATGGGAATACGGAGGCTTCTGGTGCGGCAGTAAAGCCAAAGAGTTCCAATCCTTTTGGAAATGCAAGACCGAGGGAACAGGTATTGGCTGAGAAGGGGCAGGACTGGAAAAAGATTGATGAGCAGCTCGAGTCAATGAAAATTAAGGATACAGTTGAGAGGGCTGAGAGATCTAGTGGGGCTTCTTTTGAGAGAAAAGGCTTTGGAGGTCGAAGTGGTCGGTCTCCCGAAGATCGGTCAGGGAGGAGTTGGAGGAAGCCAGAGGCTGTGGAGTCTCGTCCCCAAAGTGCTGAGGTGGCTGGTGATGGACCTGCTGCGGAAAACTGA 1230 53.98 MAATMSPWGKPGAWALDAEEHEAELLKDQQDQSRQQSEPSADFPSLAAAAATKPKKKKGQPITLSEFQSYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTAEELDRNRLGGGFKSWGQNSLYDRGNRYSNGEDSSNSRRGSRVFDDSRRSNDGSNREFRREPLPSRADEIDDWGAGKKPMMGNGFERRERGGGGFFDSHSSKADESDSWVSNKSFSPSEGRRSGGIGGGFERERRGGFPSNGGGADSDNWGRKSEGARGGIGENGGGADSDNWGKKSEGVRGGIGERPRLNLQPRSIPLNNGNTEASGAAVKPKSSNPFGNARPREQVLAEKGQDWKKIDEQLESMKIKDTVERAERSSGASFERKGFGGRSGRSPEDRSGRSWRKPEAVESRPQSAEVAGDGPAAEN 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37652527 37654671 + Lag0009278.1 Lac9g1791 620717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g1791 409 MobiDBLite consensus disorder prediction 62 85 - -
Lac9g1791 409 MobiDBLite consensus disorder prediction 15 31 - -
Lac9g1791 409 MobiDBLite consensus disorder prediction 183 207 - -
Lac9g1791 409 Coils Coil 16 36 - -
Lac9g1791 409 Pfam Plant specific eukaryotic initiation factor 4B 7 232 IPR010433 GO:0003743(InterPro)
Lac9g1791 409 Pfam Plant specific eukaryotic initiation factor 4B 215 367 IPR010433 GO:0003743(InterPro)
Lac9g1791 409 MobiDBLite consensus disorder prediction 371 393 - -
Lac9g1791 409 MobiDBLite consensus disorder prediction 295 312 - -
Lac9g1791 409 MobiDBLite consensus disorder prediction 329 362 - -
Lac9g1791 409 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 398 IPR010433 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)
Lac9g1791 409 MobiDBLite consensus disorder prediction 1 409 - -
Lac9g1791 409 MobiDBLite consensus disorder prediction 120 138 - -
Lac9g1791 409 MobiDBLite consensus disorder prediction 139 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g0690 Lac-Chr6:5857859 Lac9g1791 Lac-Chr9:37652527 8.80E-32 dispersed
Lac7g2654 Lac-Chr7:45364741 Lac9g1791 Lac-Chr9:37652527 1.20E-19 dispersed
Lac4g1339 Lac-Chr4:31587882 Lac9g1791 Lac-Chr9:37652527 2.30E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g1791 K03258 - csv:101214573 664.07