Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g1811 ATGGGTTCTTTGAAGCTGCCTCCTTCGACGACGGTGCTTAAATGGCTGGGATTTGTCTCCGCCGTCTGGGTTCAGGCCATTTCCGGCAACAACTACACCTTTTCCAACTACTCCGACGCCCTCAAATCCCTGATGAACCTGACCCAACTTGAGCTCAACAATCTCTCCGTCGCAAAAGACGTCGGAAAAGCCTTTGGCCTTCTCGCCGGAATCGCCTCTGATCGCTTCCCCACTTGGGTCATCTTGCTTATCGGCTCTCTTGAAGGCCTTCTTGGCTATGGCGTCCAGTGGCTCGTCGTTAGCCAGAGAGTCAGCCCTCTTCCTTACTGGCAGATGTGCATCTTTCTGTGTATGGGCGGGAACAGCACGACGTGGATGAACACGGCGGTGCTGGTGACCTGCATCAGAAACTTCCGGAAGAATCGCGGCCCAGTTTCCGGCATTCTCAAAGGCTACGTCGGCCTCAGCACCGCCATTTTCACCGATCTCTGCACTGCTCTGTTTTCCGGCGACCCATCGTCCTTCCTCGTCATGCTCGCCGTCGTCCCCTTCGCCGTCTGCCTCTTCGCCATGTTCTTCCTCCGCGAGATCCCACCTCCGGAAACCGCCAACGCCGCCGCCGCCGACGCCCAAGAAGAGTCAAACTTCTTCGCCGTCTTCAACGCCCTGGCCGTCGTCGTCGCCGTCTATCTGTTGTGCTTCGATTTCATCAAAAACTCCGGCAGAGTCGTCTCCCAGTTGTTCTCCGTCGGGCTGTTGATTCTCCTCGGATCCCCTTTGGTTATTCCGATTTACTCGTTTTTCAAGAGCTGGCAGTCGAATCGGGCCCCGTCGGATTTGGAGGCCCGGATTGAAGAGCCGCTGCTGAAGGAAGAAGCGGCGGTGGCGGCGGTGAAGGAGGAGGAAATTGAGGAGGAGAGGAGACAGCCGGTGATCGGAGAAGAACATACGATATTTGAGGCGCTGAAAACGGTTGATTTCTGGGTTTTGTTCGTGTCGTTTCTGTGTGGAGTTGGAACTGGAATGGCGGTGATGAACAATATGGGTCAGATCGGATTGGCTCTTGGTTACGCCGATGTATCCATGTTCGTTTCTCTTACGAGTATTTGGGGCTTCTTCGGTCGGATACTTTCCGGCACACTTTCCGAGCATTTTCTCAAAGCCGCTCGTCAAAACTCACGACGGAACCCCGACTTCCGAGGTCATGGCCCGGGGCCCCATCTGGCCCCCATCAAGCATACCACTGACGCGTCTGACGACACTGTTGCTTCTCAATATCTTCATGCCTTCTTAAAAGCAGGCACACCAAGGCCTCTATGGAACGCCGCATCTCAAATTCTAATGGCCGTTGGGTATGTTTTGATGGCAATAGCAATGCCAGGGTCCCTCTACATTGGCTCGGTGGTCGTCGGAATCTGCTACGGCGTACGTCTCTCCATCACCGTCCCCACCGCCTCCGAGCTCTTCGGCCTCAAATACTACGGTCTCATCTACAACATTCTCATCCTCAATCTCCCCATCGGCTCCTTCCTCTTCTCGGGCCTCCTCGCGGGGTTCCTCTACGACAGGGAGGCGACCCCGACCGAAGGCGGCGGTAACACCTGCATCGGGGGCCATTGCTACAGAATTGTGTTCCTGGTGATGGCCGCAGCTTGTGCCATTGGCTTCGTTTTGGACCTTTGGTTGGCCTATAGGACCAAGGAGCTTTATTCGAAGCTGAAAACCAACAAGAAATCAAAGAAGGGAAACAGCAACAGCAGCTCGTAG 1767 55.07 MGSLKLPPSTTVLKWLGFVSAVWVQAISGNNYTFSNYSDALKSLMNLTQLELNNLSVAKDVGKAFGLLAGIASDRFPTWVILLIGSLEGLLGYGVQWLVVSQRVSPLPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSGDPSSFLVMLAVVPFAVCLFAMFFLREIPPPETANAAAADAQEESNFFAVFNALAVVVAVYLLCFDFIKNSGRVVSQLFSVGLLILLGSPLVIPIYSFFKSWQSNRAPSDLEARIEEPLLKEEAAVAAVKEEEIEEERRQPVIGEEHTIFEALKTVDFWVLFVSFLCGVGTGMAVMNNMGQIGLALGYADVSMFVSLTSIWGFFGRILSGTLSEHFLKAARQNSRRNPDFRGHGPGPHLAPIKHTTDASDDTVASQYLHAFLKAGTPRPLWNAASQILMAVGYVLMAIAMPGSLYIGSVVVGICYGVRLSITVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDREATPTEGGGNTCIGGHCYRIVFLVMAAACAIGFVLDLWLAYRTKELYSKLKTNKKSKKGNSNSSS 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37862325 37865698 - Lag0009298.1 Lac9g1811 620737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g1811 588 Coils Coil 289 309 - -
Lac9g1811 588 CDD MFS_Mch1p_like 13 555 - -
Lac9g1811 588 Gene3D MFS general substrate transporter like domains 10 208 IPR036259 -
Lac9g1811 588 Gene3D MFS general substrate transporter like domains 433 573 IPR036259 -
Lac9g1811 588 Pfam Major Facilitator Superfamily 442 576 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Lac9g1811 588 Pfam Nodulin-like 14 264 IPR010658 -
Lac9g1811 588 SUPERFAMILY MFS general substrate transporter 14 568 IPR036259 -
Lac9g1811 588 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 573 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac8g2982 Lac-Chr8:46686858 Lac9g1811 Lac-Chr9:37862325 8.60E-77 dispersed
Lac9g0513 Lac-Chr9:9795469 Lac9g1811 Lac-Chr9:37862325 6.30E-30 dispersed
Lac11g0629 Lac-Chr11:6421156 Lac9g1811 Lac-Chr9:37862325 9.00E-86 transposed
Lac12g1938 Lac-Chr12:36116229 Lac9g1811 Lac-Chr9:37862325 9.90E-61 transposed
Lac4g1331 Lac-Chr4:31461332 Lac9g1811 Lac-Chr9:37862325 3.00E-62 transposed
Lac4g1408 Lac-Chr4:32450860 Lac9g1811 Lac-Chr9:37862325 3.70E-18 transposed
Lac5g2282 Lac-Chr5:41486532 Lac9g1811 Lac-Chr9:37862325 4.00E-62 transposed
Lac7g2898 Lac-Chr7:48074556 Lac9g1811 Lac-Chr9:37862325 4.50E-55 transposed
Lac4g1330 Lac-Chr4:31455159 Lac9g1811 Lac-Chr9:37862325 9.20E-141 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g1811 - - - 0.0