Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac9g1818 | ATGGCCGCTTTTCTCGCCACTTCTCTTTCTCCTCTCTTCTTCTTCTTCTTTCTTCTGTTCATTCATGGCTCTGCAGTTTCTGCCGATTCGCCATTGAAGACCTTCATCTTCCGTGTGGATCGTTTCTCCAAGCCCTCTGTTTTTCCCACCCATTACCACTGGTACACTTCCGAGTTCGCCGAATCCCCCCAAATCCTCCATGTTTACGACACTGTCTTCCATGGATTCTCTGCAACTCTCACTCAAGAGCAGGTCGATTCCATCGGAAAACACCCTTCTGTCCTCGCCGTGTTTGAGGACCGTCGCCGTCACCTTCACACCACGCGTTCCCCTCAGTTTCTCGGCCTTCGGAACCAGCGTGGTCTCTGGTCCGATTCTGATTATGGGTCGGATGTAATCATCGGGGTTTTCGACACTGGGATTTCCCCTGAACGGAGAAGCTTCTCCGATGTGAACTTGGGGCCGATTCCTCGCCGGTGGAAGGGGGTTTGTCAGACTGGAACTAAGTTCACTGCCAAAAACTGTAACAGGAAGATCGTCGGAGCGAGGTTTTTCTCTAAAGGTCACGAGGCTGGGAACAACGCTGCCGGTCCGATTATTGGGATCAACGACACGATTGAGTACCGATCTCCGAGAGACGCCGATGGCCATGGGACTCACACGGCCTCGACGGCGGCTGGGCGTCACGCGTTTCAGGCGAGTTTGGAGGGTTATGCTTCTGGAATCGCAAAGGGCGTGGCTCCTAAGGCGCGTTTGGCGGTTTACAAAGTTTGTTGGAAAAATTCGGGTTGTTTTGATTCCGATATTCTCGCGGCGTTTGATGCTGCGGTTAACGACGGCGTCGATGTCATTTCTATCTCGATTGGCGGCGGTGATGGCGTTTCCTCGCCGTATTATCTCGACCCTATTGCAATCGGAGCGTACGGCGCCGCTTCGAGGGGCGTTTTCGTTTCGTCTTCGGCTGGAAATGATGGACCTAATGGAATGTCAGTGACGAACTTGGCGCCGTGGGTTACGACGGTCGGAGCCGGTACGATTGACCGGAATTTCCCGGCGGTGGTGACTCTGGGAAACGGACGGAAGATTTATGGCGTGTCGCTCTACGCGGGAGCGCCGTTGAACGGTACAATGTATCCGTTGGTTTATCCTGGGAAATCAGGGGTGCTCTCTGCTTCGCTCTGTATGGAAAATTCGCTCGACTCCAAGCTTGTGACCGGGAAAATTGTGATCTGCGACAGGGGAAGTAGTCCGAGAGTGGCGAAGGGTTTAGTGGTGAAGAAGGCCGGCGGCATCGGAATGATTCTGGCGAACGGAATTTCCAATGGCGAAGGACTCGTCGGCGATGCCCATCTTCTTCCCGCCTGCGCCGTCGGCTCCGACGAAGGCGATGCCATGAAAGCCTACTCATCATCCTCTGGAAATCCCACCGCCACCATCGCCTTTCAGGGCACTATAATCGGAATCAAACCGGCGCCGGTGGTGGCTTCGTTTTCAGCAAGAGGACCAAACGGATTAAACCCAGAAATTCTGAAACCGGACTTGATCGCACCGGGAGTCAACATTTTAGCGGCCTGGACCGACGCCGTCGGCCCAACCGGTCTGGACTTCGATACACGAAAAACAGAGTTCAATATCTTGTCAGGTACATCAATGGCGTGTCCTCATGTAAGTGGAGCCGCCGCTCTGTTAAAATCGGCTCACCCAGATTGGAGTCCAGCAGCGTTGAGATCCGCCATGATGACCACCGCAAGTATCACCGACAACCGACGGCAGCCAATGACAGAAGAATCCACCGGAAAAGCTTCTACACCGTACGACTTCGGTGCCGGACACGTGAATCTCGGCCTCGCGATGGACCCCGGTCTAGTCTACGACATTACAAACACCGATTACATAAACTTCCTATGCTCAATCGGCTATGGACCGAAGATGATTCAGGTGATAACTCGAACGCCGGTGACATGTCCGGCGAAGAAGCCATTACCGGAGAATCTGAATTACCCATCAATGGTAGCAGTATTTTCGAGCCTAGCAAAAGGGTGGTCGACAAAATCGTTCATCCGAACGGTGACGAACGTGGGTCCAGCAAATTCAGTGTACCGAGCGAAAATCGAAGCTCCAAAAGGGGTGACGGTGAAGGTAAAGCCGTGGAAACTGGTGTTCTCGACGGCGGTGAAGAAACAGAGCTTCGTGGTGGCAATATCAGCCGACAGCCAGAATCTGGCGCTGGGCGATGTGGGCGCTGTTTTTGGTTGGCTTTCTTGGTCGGATGGAAAGCATGTGGTCCGCAGCCCACTGGTAGTGACCCAATTAGAGCCGTTGTAA | 2325 | 53.63 | MAAFLATSLSPLFFFFFLLFIHGSAVSADSPLKTFIFRVDRFSKPSVFPTHYHWYTSEFAESPQILHVYDTVFHGFSATLTQEQVDSIGKHPSVLAVFEDRRRHLHTTRSPQFLGLRNQRGLWSDSDYGSDVIIGVFDTGISPERRSFSDVNLGPIPRRWKGVCQTGTKFTAKNCNRKIVGARFFSKGHEAGNNAAGPIIGINDTIEYRSPRDADGHGTHTASTAAGRHAFQASLEGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGVSSPYYLDPIAIGAYGAASRGVFVSSSAGNDGPNGMSVTNLAPWVTTVGAGTIDRNFPAVVTLGNGRKIYGVSLYAGAPLNGTMYPLVYPGKSGVLSASLCMENSLDSKLVTGKIVICDRGSSPRVAKGLVVKKAGGIGMILANGISNGEGLVGDAHLLPACAVGSDEGDAMKAYSSSSGNPTATIAFQGTIIGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLDFDTRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAALRSAMMTTASITDNRRQPMTEESTGKASTPYDFGAGHVNLGLAMDPGLVYDITNTDYINFLCSIGYGPKMIQVITRTPVTCPAKKPLPENLNYPSMVAVFSSLAKGWSTKSFIRTVTNVGPANSVYRAKIEAPKGVTVKVKPWKLVFSTAVKKQSFVVAISADSQNLALGDVGAVFGWLSWSDGKHVVRSPLVVTQLEPL | 774 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 37984925 | 37987249 | + | Lag0009305.1 | Lac9g1818 | 620744 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac9g1818 | 774 | Pfam | Subtilase family | 129 | 596 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
| Lac9g1818 | 774 | CDD | PA_subtilisin_like | 353 | 479 | - | - | |
| Lac9g1818 | 774 | Gene3D | - | 635 | 771 | - | - | |
| Lac9g1818 | 774 | FunFam | Subtilisin-like protease SBT1.5 | 635 | 771 | - | - | |
| Lac9g1818 | 774 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 102 | 618 | - | - | |
| Lac9g1818 | 774 | Pfam | Fibronectin type-III domain | 664 | 768 | IPR041469 | - | |
| Lac9g1818 | 774 | Gene3D | - | 347 | 486 | - | - | |
| Lac9g1818 | 774 | PRINTS | Subtilisin serine protease family (S8) signature | 213 | 226 | IPR015500 | - | |
| Lac9g1818 | 774 | PRINTS | Subtilisin serine protease family (S8) signature | 547 | 563 | IPR015500 | - | |
| Lac9g1818 | 774 | PRINTS | Subtilisin serine protease family (S8) signature | 129 | 148 | IPR015500 | - | |
| Lac9g1818 | 774 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 62 | 766 | IPR045051 | - | |
| Lac9g1818 | 774 | FunFam | Subtilisin-like protease SBT1.5 | 131 | 360 | - | - | |
| Lac9g1818 | 774 | CDD | Peptidases_S8_3 | 104 | 584 | IPR034197 | - | |
| Lac9g1818 | 774 | Pfam | Peptidase inhibitor I9 | 44 | 106 | IPR010259 | - | |
| Lac9g1818 | 774 | SUPERFAMILY | Subtilisin-like | 105 | 622 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Lac9g1818 | 774 | SUPERFAMILY | PA domain | 398 | 473 | IPR046450 | - | |
| Lac9g1818 | 774 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 548 | 558 | IPR023828 | - | |
| Lac9g1818 | 774 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 23 | 106 | IPR037045 | - | |
| Lac9g1818 | 774 | FunFam | subtilisin-like protease SBT1.5 | 347 | 486 | - | - | |
| Lac9g1818 | 774 | Gene3D | Peptidase S8/S53 domain | 131 | 631 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Lac9g1818 | 774 | SUPERFAMILY | Protease propeptides/inhibitors | 62 | 105 | - | - | |
| Lac9g1818 | 774 | Pfam | PA domain | 378 | 464 | IPR003137 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac1g3629 | Lac-Chr1:55385447 | Lac9g1818 | Lac-Chr9:37984925 | 3.00E-90 | dispersed | |
| Lac4g3060 | Lac-Chr4:48742770 | Lac9g1818 | Lac-Chr9:37984925 | 7.80E-242 | dispersed | |
| Lac5g2867 | Lac-Chr5:46909412 | Lac9g1818 | Lac-Chr9:37984925 | 4.10E-72 | dispersed | |
| Lac5g2868 | Lac-Chr5:46910443 | Lac9g1818 | Lac-Chr9:37984925 | 3.10E-120 | dispersed | |
| Lac6g0258 | Lac-Chr6:2099405 | Lac9g1818 | Lac-Chr9:37984925 | 3.70E-204 | dispersed | |
| Lac6g0289 | Lac-Chr6:2363761 | Lac9g1818 | Lac-Chr9:37984925 | 4.40E-149 | dispersed | |
| Lac6g0828 | Lac-Chr6:7128274 | Lac9g1818 | Lac-Chr9:37984925 | 8.60E-140 | dispersed | |
| Lac6g2273 | Lac-Chr6:39899532 | Lac9g1818 | Lac-Chr9:37984925 | 1.50E-94 | dispersed | |
| Lac9g1818 | Lac-Chr9:37984925 | Lac9g2543 | Lac-Chr9:44095565 | 8.20E-119 | dispersed | |
| Lac9g1818 | Lac-Chr9:37984925 | Lac1g2631 | Lac-Chr1:47657902 | 4.80E-212 | transposed |
Pathway information