Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g1843 ATGTTCTCAGAGTTGATGAACTTTCTGAGAGCTTGTTTTCGACCGAGGTCGAATCGACATGTGCACAAAGGTTCAGATGCTAGTGGTCGACAGGATGGTCTCCTATGGTACAAAGATAGTGGGCAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAGGCTAACAATTTACTTGAAGATCAAAGCCAGATGGAGTCAGGCAATTTGAGCTTGCACGAGTCCGGGCCATATGGTACCTTTGTTGGCGTGTATGATGGCCATGGAGGGCCCGAGACATCTCGCTATGTAAATGATCACCTTTTCCAGCATCTTAAAAGGTTTACTTCGGAGCAACAATCCATGTCAGTGGATGTCATACGAAAGGCTTTTCAAGCTACTGAAGAGGGGGTCATTGCTCAAGTTTCGAAACAATGGTCGATGAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTTGGTGTAATTTGTGGTGGAACCCTTTACATTGCTAACCTTGGTGATTCACGAGCTGTTTTAGGGAGAGTTGTAAAGGCAACAGGGGAAGTTTTGTCCGTTCAGTTGTCGGCTGAGCATAATGCATCTATAGAGTCTGTGAGGCAGGAGCTCCGTGCCCTGCATCCTGATGACCCACAGATTGTAGTTTTGAAGCATAATGTATGGCGCGTGAAGGGCCTTATACAGATTTCTCGATCTATCGGTGATGTCTATTTAAAGAAAGCTGAGTTCAACCGAGAGCCTCTTTATGCTAAGTTCCGCCTTCGTGAACCTATCAAAAAGCCCATACTGAGCGCCGAACCATCTATTTCAGTGCTCCAATTGCAGCCACAGGATCAGTTTATTATATTTGCTTCAGATGGGCTCTGGGAACACCTTAGCAATCAGGAAGCTGTTGATATTGTCCAAAACCATCCACGTAGTGGAAGTGCAAGGAGGCTGGTGAAAGCAGCACTGCAAGAGGCAGCAAAGAAGAGAGAAATGCGATATTCCGATTTGAAGAAGATTGACCGTGGCGTACGGCGACATTTCCACGATGACATCACAGTGATTGTTGTTTTTCTCGACTCAAACCTTGTGAGCCGGGCTAGCTCTACAAAATGTGCAAGCCTATCCGTGCGAGGGGGCGGGGTTAACTTGCGTCCAAACTCATTGGCCCCTTGCACCACACCATCAGACACTGGCATGGCCTGA 1194 47.24 MFSELMNFLRACFRPRSNRHVHKGSDASGRQDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQMESGNLSLHESGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAFQATEEGVIAQVSKQWSMRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLSVQLSAEHNASIESVRQELRALHPDDPQIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPIKKPILSAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSTKCASLSVRGGGVNLRPNSLAPCTTPSDTGMA 397
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 38204733 38207148 + Lag0009330.1 Lac9g1843 620769
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac9g1843 397 Gene3D - 33 367 IPR036457 -
Lac9g1843 397 Pfam Protein phosphatase 2C 75 323 IPR001932 -
Lac9g1843 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Lac9g1843 397 CDD PP2Cc 48 355 IPR001932 -
Lac9g1843 397 FunFam Phosphatase 2C family protein 36 365 - -
Lac9g1843 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169(InterPro)
Lac9g1843 397 PANTHER PROTEIN PHOSPHATASE 39 354 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Lac9g1843 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Lac9g1843 397 SMART PP2C_4 39 353 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2623 Lac-Chr10:40361221 Lac9g1843 Lac-Chr9:38204733 5.40E-119 dispersed
Lac10g3064 Lac-Chr10:45114951 Lac9g1843 Lac-Chr9:38204733 7.10E-145 dispersed
Lac13g0870 Lac-Chr13:7066149 Lac9g1843 Lac-Chr9:38204733 1.90E-146 dispersed
Lac8g3063 Lac-Chr8:47318245 Lac9g1843 Lac-Chr9:38204733 8.50E-22 dispersed
Lac9g1843 Lac-Chr9:38204733 Lac9g2142 Lac-Chr9:40949550 1.90E-10 dispersed
Lac11g0967 Lac-Chr11:10660091 Lac9g1843 Lac-Chr9:38204733 7.60E-118 transposed
Lac12g0185 Lac-Chr12:2079906 Lac9g1843 Lac-Chr9:38204733 1.50E-110 transposed
Lac1g3042 Lac-Chr1:51058272 Lac9g1843 Lac-Chr9:38204733 2.00E-182 wgd
Lac4g1279 Lac-Chr4:30786009 Lac9g1843 Lac-Chr9:38204733 1.10E-161 wgd
Lac5g0081 Lac-Chr5:679443 Lac9g1843 Lac-Chr9:38204733 6.80E-170 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g1843 - - - 0.0