Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2010 ATGCCGAAGGGTTTGAAGAGTAAATGCCAATCTGCTTCTCATCAGCTTTTGAAGGAGAAAGCTAAGAGCCGGGTTAATGACCTTCAAGGGATATTCACTAATCTTCAGTCTGCTAGGAAGGAGAGTCGTGCTACTGACGTTGCTGTCTTGGAGGAGCAAGTACATCAGATGCTTAGGGAGTGGAATGCTGAACTTAACGAACCGTCACCTGCCTCTTCATTTGTTGAGGGCAGTCTTGGATCGTTCTCTCAAGAATTAGCCCGCCTTCTCGAGCATTGTGATGAGCAAGACGATGCGACTAGTATATTAGCTGAACCAAAGCCTGAGCCTGACCTCCATTGCGTTCTTGCCAGCAATGTGTCAAATTTTCAGCAGGATGGTTTTGGTATTCCGGAGCTCCAACAGGATAGTTTTCTTGGATTTGAAGAGTGCAAAGTTGCTACCCCAGTCCTACAGAATTATTCGTTTTACAAATCAGACATGGCTACTCAGTCTAATAGTCAGGATTTCAAATTAGATCAGAACGTTGTGCAGAACACAGTGGTCAGTAAGGATGATATGTCTACTTTGGATTGCCATTTATTGGATTCACATCAAGAGTATGACTATGGGGTTCTCATTGGGGCATATGATATGGGAGACTTTAGTCAGGACACAAAGCCTGGTGTTCTCCCAAATATCTCGCCCCCACCGTCTGCGTTTATGGGGCCAATATGTGCTCTCTGGGATTGTTTCAGACCTGCTCAAGGATCTAAATGGTGTCAGGACTATTGCAGTAGCTGTCATTCTATTCTTGCAATAAATGAAGGCCTTCCAGGAATGACTCCAATATTGCGCCCTGGGGGCATTGGCTTAAAGGATGGTCCATTGTTTGCTGCTCTTCGTGCAAAGACACAGGACAAAGCAGTTGGCATACCTATATGTGATGGTGCTGCGACAAAGAAATCTCCATGGAATGCTCCTGAGCTTTTTGATATCTCGTTTCTTGAGGGTGAGACAATCAGGGAATGGCTCTATTTTGACAGGCCTAGACGGGCCTTTGAGAGTGGTAACCGAAAGCAAAGGTCATTACCGGATTATAGAGGCCGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAGTTCGGTGGTCAGAAGAAGTCCTATTACATGGATCCACAGCCATCAAGCTCTATAGAATGGCACTTGTACGAATATGATATCAGCAATTATGATTCATTTGCATTGTATAGGCTGGAACTCAAGCATGCTGATGCAAAGAAGAGTCCAAAGGGAAAATTGACAGCTGATCCTCTGGCCGATCTGCAGAAGAAGATGGGAAGGCTTACTGCAGAGGGGCCTGTTGAGCTTGGACAATCAATTAAAGGTGTGACGAAGGAAAATAATAAGGCTGATACTGTAAATATCAATCTTGCTCCTCATCTTCAGAACATGTCTAACACTAATTGA 1452 44.7 MPKGLKSKCQSASHQLLKEKAKSRVNDLQGIFTNLQSARKESRATDVAVLEEQVHQMLREWNAELNEPSPASSFVEGSLGSFSQELARLLEHCDEQDDATSILAEPKPEPDLHCVLASNVSNFQQDGFGIPELQQDSFLGFEECKVATPVLQNYSFYKSDMATQSNSQDFKLDQNVVQNTVVSKDDMSTLDCHLLDSHQEYDYGVLIGAYDMGDFSQDTKPGVLPNISPPPSAFMGPICALWDCFRPAQGSKWCQDYCSSCHSILAINEGLPGMTPILRPGGIGLKDGPLFAALRAKTQDKAVGIPICDGAATKKSPWNAPELFDISFLEGETIREWLYFDRPRRAFESGNRKQRSLPDYRGRGWHESRKQVMKEFGGQKKSYYMDPQPSSSIEWHLYEYDISNYDSFALYRLELKHADAKKSPKGKLTADPLADLQKKMGRLTAEGPVELGQSIKGVTKENNKADTVNINLAPHLQNMSNTN 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39717427 39720306 + Lag0009497.1 Lac9g2010 620936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2010 483 PANTHER TRANSCRIPTION FACTOR VOZ1 1 478 IPR039277 GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0045893(PANTHER)|GO:0048578(PANTHER)|GO:0048578(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3371 Lac-Chr1:53317558 Lac9g2010 Lac-Chr9:39717427 6.00E-144 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24449 None None None None Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2010 - - - 0.0