Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2070 ATGAAAATGGGGCGGCTTACTTCTTTGGAGTTGGCCATTATAGTTGGTCTTCTAGGCCTGATAGGCTCCACTCAAGCTCAGTTGCAGCTTGGTTTCTATGCCAAAAGCTGCCCAAACGCTGAGAAAATCGTCTTAGATTTCGTTCACCAGCATATCCACAATGCCCCTTCACTGGCGGCCACTTTCATTAGAATGCACTTCCATGATTGCTTTGTCAGGGGTTGTGATGCATCTGTGCTGATAAATACCACCTCAAATAACCAAGCTGAGAAGGATTCTGCACCAAATCGAACACTCAGAGGCTTTGACTTCCTTGATAGAGTCAAAAGCTTACTTGAAGCTGAATGCCCTGGAGTTGTGTCTTGCGCAGATGTTCTTACCTTGGTTGCGAGAGATACCATTGTAGCCACGGGAGGTCCTTACTGGGAAGTTCCAACTGGCCGAAGGGATGGAGTGATCTCAAGGGCATCAGAAACTAACTCCATTCCTCCTCCTTTTGCAAACTTCACAACACTCCAAACACTTTTCGCAAACCAAGGCCTTGATCTTAAAGACTTGGTCTTGCTATCTGGCGCTCACACAATCGGCATAGCACATTGCTCGTCATTCAGAAACCGACTCTACAACTTCACCGGCGTCGGCGACCAAGACCCCTCCCTCGACCCCAGATACGCCGCTAATCTCAAGGCCAACAAATGCAAAACCCCCACCGACAACAGCAAAGTGGAAATGGACCCAGGAAGCCGCAACACTTTTGACCTCAGCTACTACTCTCTTCTCCTCAAAAGAAGGGGCCTTTTCGAATCCGATTCTGCTCTAACTAAAGACGCAACTACATTGGCTCTAGTTCAGAAGCTCGTTCAAGGACCCATTGAAGAGTTCTTCGCTGAATTTGCAGCGTCCATGGAGAAACTGGGTCGGATTAAAGTGAAGACTGGCACTGAAGGTGAAATCAGAAGAAGATGCGCTGTGGTGAATAGTTAA 984 47.76 MKMGRLTSLELAIIVGLLGLIGSTQAQLQLGFYAKSCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINTTSNNQAEKDSAPNRTLRGFDFLDRVKSLLEAECPGVVSCADVLTLVARDTIVATGGPYWEVPTGRRDGVISRASETNSIPPPFANFTTLQTLFANQGLDLKDLVLLSGAHTIGIAHCSSFRNRLYNFTGVGDQDPSLDPRYAANLKANKCKTPTDNSKVEMDPGSRNTFDLSYYSLLLKRRGLFESDSALTKDATTLALVQKLVQGPIEEFFAEFAASMEKLGRIKVKTGTEGEIRRRCAVVNS 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40326885 40328192 + Lag0009557.1 Lac9g2070 620996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2070 327 FunFam Peroxidase 31 174 - -
Lac9g2070 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 PANTHER PEROXIDASE 25-RELATED 28 322 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Lac9g2070 327 Gene3D - 31 326 - -
Lac9g2070 327 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 Pfam Peroxidase 46 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Lac9g2070 327 SUPERFAMILY Heme-dependent peroxidases 27 326 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 CDD secretory_peroxidase 27 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac9g2070 327 Gene3D Peroxidase, domain 2 163 305 - -
Lac9g2070 327 FunFam Peroxidase 163 305 - -
Lac9g2070 327 ProSiteProfiles Plant heme peroxidase family profile. 27 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2070 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0622 Lac-Chr12:6586955 Lac9g2070 Lac-Chr9:40326885 6.10E-124 dispersed
Lac12g2368 Lac-Chr12:40798105 Lac9g2070 Lac-Chr9:40326885 2.10E-79 dispersed
Lac9g2070 Lac-Chr9:40326885 Lac9g2881 Lac-Chr9:46741595 4.60E-63 dispersed
Lac12g0621 Lac-Chr12:6575020 Lac9g2070 Lac-Chr9:40326885 3.70E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2070 K00430 - csv:101213629 581.252