Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2080 ATGATGATTCAAAGAGAAATGGAATGGAAAAGAGCAAGTTATGTTGTTGTTTTTGTGATTCTGCTCTGTGCATTGGCAATTGCGAGCTCAGAGGGCAGAAGGAAGACGATCGAAATGGTTCTCGCCAATGCCGACGATTGCCATTTCACATCGTTGGAATTGGAAGCACATATGGGCGAGCAGGCGTGTTTGAAAGAATTGGCAGAGAGGGAATATGAAGATGATGAATTTGTTCCTTGCATCCAAAAAGAGGACATGGATGAAGCTATAAGAATTCTGCCTCCTGACATGAAACAAGACTTGTTGGATTGTTTAAGAAAGAAAAGTATGCTTTCTCGTGGGTCTGAACCAAGACATAGCTTCTTTGATTGGTTTAGCAAGTCAATTGAGTTGATCTTCGGAGGGCCTCATATTCACCTTAGACATACAATTAGAGCATCGGAACCTTCACCATCACCATCACCGAACCCTGCTGCAGCTGGAGCTCCATCTCCTTCATCAGAATCACCAGCGGATTCTCCATCACCATCTCCTAGTTATGCTCCAATGCCATCGCCAAGAAATGCCCCAGCCAAGTCTCCATCGCCAGACCTTCATCCTGAGGCTCCAACACCATCCGCTCGGGAACCCCCAGTGGACGACAACGACACTCCGCCAGCCCCGCCGGCGGACGACAACGACACTCCGCCTGCCCCGCCGGCGGACGACAACGACACTCCGCCAGCCCCACCGGCGGAGGACAACGACACTCCGCCAGCAGACGACAACGACACCCCGCCAGCGGACGACAACGACACCCCGCCAGCGGACGACAACAACAGCGATGTTTTAGATTCACCTCCACGATCTGTTGGTCGCTCACCACCTCGTCCACGTGCTCCTCCCAAGCCTCGCTCGACAGAGAAGGAAGAAGAAAGCCAGATAGCTATAATTGCTGGTATTGTAGCAGCTGGTGTGGGAGTTATTCTTATTGTTGTCCTACTTTTGTTCTGCTGTCATAGTGATGATAAAAGTAAGATTGATCCGAAGGATGGGCAAAGGGATGAGAAACCTCTTCTCAACATATCTATGGGCGAATTATCAGCTGGTTCTTTAAAGCAGTCATACAATCCTGGAAATTCAGCTGCCAAAGAGTTCAGCAATAATGCCGATAATGGAAATAAACCACCCTCTTTTGCTGGCAAATTATCAGTGGATCCTGAAAATGGTACCTCAATAGCTGAGGCTCCAACATCTGAGGGAAAATCATCAGCAATGCCACCTCTAAAACCCCCTCCTGGAAGATCAGATTCTCAGCCTCCTCCTCCACCTCCAGCAGACCCAGCACCAGCACCAGCACCAGAACCAGAACCAGTGGTGGCACCTCCACCGCCTCCGCCACCTGCTCCTAGAGCCCCACCGCCGCCACCCCTGAAAGCTGCTCGGCCCCCACCTGCCCCACCGGCAGCAATCCCTAAATCTCAAGTAGGGCCTGTGGCGCCACATCAGCGTGGACCCAGTGGCTCGAGCATGGATGCGGATTCAGTAGGCAAGACCAAGTTAAAGCCATTCTTCTGGGATAAGGTTCTGGCCAACCCTGGCCAATCCATGGTTTGGCACGAGATTAGTGCAGGATCTTTCCAATTCAATGAGGAGATGATGGAGTCTCTATTTGGATATACAGCGGCAGAAACTAACAAAGGCGACCGCAGGAAAGATTCAGTTTCAGATTCTTCAGTACAATACATTCAAATCATCGACGCAAAGAAAGCTCAAAACCTTTCAATTCTCCTACGAGCACTGAATGTGACAACAGCAGAAGTTGTGGATGCCATTGAAGAAGGAAATCCTGAACTTCCGGCGGAGCTTATACAGACCTTGTTGAAGATGGCACCAACAACAGAAGAGGAACTGAAACTGAGATTATTCTCAGGTGACCTTTCTCAGTTAGGTCCAGCAGAACGGTTCCTCAAAGTGTTGGTGGACATTCCTTTTGCTTTCAAACGATTAGAGTGTCTTCTCTTCATGCTCTCATTGTCGGAAGAAGTCACCACCATTAAAGAATCATTCGCAACTCTACAGGTCGCTTGCAACAAACTCAGAAACAGCAGGCTATTTCTCAAGCTATTAGAAGCAGTTCTCAAAACTGGCAATCGAATGAACGATGGGACGTACCGTGGCGGTGCTCAGGCGTTTAAGCTCGACACTCTCTTGAAACTGGCGGATGTTAAAGGAACCGACGGCAAGACTTCGCTCTTACACTTCGTCCTACAGGAGATTATTCGTTCGGAAGGCATACGAGCAGCCCGCTCTGACAGACAGAGCCGGAGTTTGTCCAGCGTAACCTCCGCCGATACGATTCCTGAGGAATCCGCCGACGATTCAGCGGAACATTATCGGCAATTAGGCCTTCAGGTCATTTCTGGTTTGAGTACGGAGCTCCAGGACGTTAAAAGAGCGGCAGCCATAGATGCGGAAGGGCTAACGACAACGATATCGAAACTTGGGCAGTCTATGTTGAGAACCAAAGGATTTATAAACGCCGAGATGAAGAGTTTAGACGAAGACAGCAAATTCCACCAATCGCTGTCGAAATTTTTGGAAGGAGCAGAAGCGGATATTTTGTGGATTTCAGGGGAAGAAAAGAAGATAATGGCACTGGTGAGGAGCACAGTGGATTACTTCCATGGAAATTCTGGAAAGGACGAAGGATTGAGATTGTTTACGATCGTACGTGATTTTCTGATTGTGTTAGACAAGACATGTAAACAGGTTAAAGATGCGGCTGCAGCGGCTGCAGCAGCGGCAAAGCAAGCGAAAAATTCCAAAAAAGAAACTCCAACATTGTCGGCTACTAATCAGCGGGATGATCTACGGCAGCGGCTATTTCCGGCGATTGCAGAGCGACGGATGGGCGAGTACTCTAGTTCTTCGGACGACGAGGAGGACGACGAGAGTTCATCTTCATCATCCTAG 2955 49.14 MMIQREMEWKRASYVVVFVILLCALAIASSEGRRKTIEMVLANADDCHFTSLELEAHMGEQACLKELAEREYEDDEFVPCIQKEDMDEAIRILPPDMKQDLLDCLRKKSMLSRGSEPRHSFFDWFSKSIELIFGGPHIHLRHTIRASEPSPSPSPNPAAAGAPSPSSESPADSPSPSPSYAPMPSPRNAPAKSPSPDLHPEAPTPSAREPPVDDNDTPPAPPADDNDTPPAPPADDNDTPPAPPAEDNDTPPADDNDTPPADDNDTPPADDNNSDVLDSPPRSVGRSPPRPRAPPKPRSTEKEEESQIAIIAGIVAAGVGVILIVVLLLFCCHSDDKSKIDPKDGQRDEKPLLNISMGELSAGSLKQSYNPGNSAAKEFSNNADNGNKPPSFAGKLSVDPENGTSIAEAPTSEGKSSAMPPLKPPPGRSDSQPPPPPPADPAPAPAPEPEPVVAPPPPPPPAPRAPPPPPLKAARPPPAPPAAIPKSQVGPVAPHQRGPSGSSMDADSVGKTKLKPFFWDKVLANPGQSMVWHEISAGSFQFNEEMMESLFGYTAAETNKGDRRKDSVSDSSVQYIQIIDAKKAQNLSILLRALNVTTAEVVDAIEEGNPELPAELIQTLLKMAPTTEEELKLRLFSGDLSQLGPAERFLKVLVDIPFAFKRLECLLFMLSLSEEVTTIKESFATLQVACNKLRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLADVKGTDGKTSLLHFVLQEIIRSEGIRAARSDRQSRSLSSVTSADTIPEESADDSAEHYRQLGLQVISGLSTELQDVKRAAAIDAEGLTTTISKLGQSMLRTKGFINAEMKSLDEDSKFHQSLSKFLEGAEADILWISGEEKKIMALVRSTVDYFHGNSGKDEGLRLFTIVRDFLIVLDKTCKQVKDAAAAAAAAAKQAKNSKKETPTLSATNQRDDLRQRLFPAIAERRMGEYSSSSDDEEDDESSSSSS 984
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40406557 40410218 + Lag0009567.1 Lac9g2080 621006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2080 984 MobiDBLite consensus disorder prediction 360 388 - -
Lac9g2080 984 ProSiteProfiles Formin homology-2 (FH2) domain profile. 504 937 IPR015425 -
Lac9g2080 984 Gene3D Formin, FH2 domain 514 949 IPR042201 -
Lac9g2080 984 Pfam Formin Homology 2 Domain 511 910 IPR015425 -
Lac9g2080 984 PANTHER FORMIN-RELATED 272 974 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Lac9g2080 984 SMART it6_source 503 954 IPR015425 -
Lac9g2080 984 MobiDBLite consensus disorder prediction 356 508 - -
Lac9g2080 984 MobiDBLite consensus disorder prediction 970 984 - -
Lac9g2080 984 MobiDBLite consensus disorder prediction 419 487 - -
Lac9g2080 984 MobiDBLite consensus disorder prediction 960 984 - -
Lac9g2080 984 SUPERFAMILY Formin homology 2 domain (FH2 domain) 574 935 - -
Lac9g2080 984 MobiDBLite consensus disorder prediction 145 305 - -
Lac9g2080 984 MobiDBLite consensus disorder prediction 169 248 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0591 Lac-Chr3:4581722 Lac9g2080 Lac-Chr9:40406557 1.90E-27 dispersed
Lac3g2794 Lac-Chr3:44066133 Lac9g2080 Lac-Chr9:40406557 4.60E-97 dispersed
Lac6g0039 Lac-Chr6:356970 Lac9g2080 Lac-Chr9:40406557 2.10E-65 dispersed
Lac9g1078 Lac-Chr9:25485814 Lac9g2080 Lac-Chr9:40406557 2.80E-102 dispersed
Lac2g1354 Lac-Chr2:11379705 Lac9g2080 Lac-Chr9:40406557 1.60E-157 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2080 K28090 - csv:101206094 1030.01