Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac9g2134 | ATGGATAAGGAGCTCAAATCTCATCCCAGAGTGGACTGTTTCTGTAGTGGCAGTACGGCGGTAACTCTAGTGAAGCAGGGTTCAGATCTATTCGTAGGAAGTATTGGGGATTCTCGAGCAATTCTTGGATCTAAAGACAGCAGTGGTTCCCTTGTAGCAACCCAATTGACAGTAGATCTAAAGCCTGATTTGCCTAGAGAAGCTGAAAGGATAAAGAAGTGTAAAGGAAGGGTATTTGCATTGCAAGATGAGCCAGAAGTGCCAAGAGTGTGGCTTCCATTTTCTGCATATTACTGA | 297 | 44.11 | MDKELKSHPRVDCFCSGSTAVTLVKQGSDLFVGSIGDSRAILGSKDSSGSLVATQLTVDLKPDLPREAERIKKCKGRVFALQDEPEVPRVWLPFSAYY | 98 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 40897116 | 40897591 | - | Lag0009621.1 | Lac9g2134 | 621060 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac9g2134 | 98 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 98 | IPR001932 | - | |
| Lac9g2134 | 98 | Pfam | Protein phosphatase 2C | 2 | 79 | IPR001932 | - | |
| Lac9g2134 | 98 | SUPERFAMILY | PP2C-like | 1 | 80 | IPR036457 | - | |
| Lac9g2134 | 98 | PANTHER | PROTEIN PHOSPHATASE | 1 | 91 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
| Lac9g2134 | 98 | CDD | PP2Cc | 1 | 79 | IPR001932 | - | |
| Lac9g2134 | 98 | Gene3D | - | 1 | 97 | IPR036457 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac9g2134 | Lac-Chr9:40897116 | Lac9g2142 | Lac-Chr9:40949550 | 7.30E-49 | proximal |
Pathway information