Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2175 ATGGGGTCTCGACGCTTTGCTGGTTTTGTGGCTTTGGCTTTACTTGGGGCTATGGTTTGTTCTTCTGAAGCTTACAGATTCTATGTTGGTGGCAGAGATGGCTGGGTTTTGAACCCTTCTGAGACCTTCAATCATTGGGCTGAACGTAATAGGTTTCAAGTCAATGATACTCTTTATTTCAAGTACAAAAACGAGACGGATTCAGTGTTGGTTGTAAGCAAGGACGATTACAATTCATGCAACACCAAAAACCCAATTATTTCTCTAAAAGATGGTGAATCGATCTTCAAATTTGGTCACTCTGGTCCATTTTATTTCATCAGTGGAAATGCCGATGCCTGCCAAAAGGGCCAAAAGCTCATCGTTGTGGTTCTCGCTGTCAGACACAATCAAAATCAACACCACGCTCAGCCGCCGTGTTCTTCTTCTCCGGTGCCGCCGCCGTCGCAACCTCAGACCCCCACTGCACAGTCACCGGAAAAACCTGGTTCGCCGGAATCCGCCGTCGCGCCAGTTCCGGCTCCGGCCAAAAGTTCCGCTTTTAGAGGCCCAGTTACATTCAGCTTCTGTCTAGGGATAATCAATGCTGTTCTTGCAAGCGGTTTTTTTGTGGGTTTTCTTTAA 624 46.96 MGSRRFAGFVALALLGAMVCSSEAYRFYVGGRDGWVLNPSETFNHWAERNRFQVNDTLYFKYKNETDSVLVVSKDDYNSCNTKNPIISLKDGESIFKFGHSGPFYFISGNADACQKGQKLIVVVLAVRHNQNQHHAQPPCSSSPVPPPSQPQTPTAQSPEKPGSPESAVAPVPAPAKSSAFRGPVTFSFCLGIINAVLASGFFVGFL 207
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 41218947 41220186 - Lag0009662.1 Lac9g2175 621101
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2175 207 Gene3D - 23 129 IPR008972 -
Lac9g2175 207 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Lac9g2175 207 FunFam Early nodulin-like protein 1 24 129 - -
Lac9g2175 207 MobiDBLite consensus disorder prediction 140 155 - -
Lac9g2175 207 CDD OsENODL1_like 25 125 IPR041846 -
Lac9g2175 207 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055(InterPro)
Lac9g2175 207 MobiDBLite consensus disorder prediction 133 173 - -
Lac9g2175 207 Pfam Plastocyanin-like domain 35 118 IPR003245 GO:0009055(InterPro)
Lac9g2175 207 PANTHER BLUE COPPER PROTEIN 20 148 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g0590 Lac-Chr6:4927116 Lac9g2175 Lac-Chr9:41218947 3.80E-24 dispersed
Lac10g0209 Lac-Chr10:1626367 Lac9g2175 Lac-Chr9:41218947 4.30E-20 transposed
Lac2g1369 Lac-Chr2:11549615 Lac9g2175 Lac-Chr9:41218947 3.10E-30 transposed
Lac5g0132 Lac-Chr5:1076138 Lac9g2175 Lac-Chr9:41218947 6.40E-20 transposed
Lac8g2534 Lac-Chr8:43137326 Lac9g2175 Lac-Chr9:41218947 4.50E-22 transposed
Lac2g1256 Lac-Chr2:10287733 Lac9g2175 Lac-Chr9:41218947 1.50E-36 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2175 - - - 0.0