Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2254 ATGACGTGGCAACCATCGGGCCCACCTCCCCAACCCCATCTGCACCTAAATCTGGGAACACACACAGATCTTGGAGCTTCCATTGATTCGGTCGATTTCGAGTTATTTCGCCGCTCTAATTCGAAAGGGAAATCGAGGTTGAGGGGGTTGAGTTTCTTCTTCTTGATTTTGGATTGGTTTCGCTTCACCAGCTCTTCTTGCTTGAGAATTTGGACTTCCCCCATTTTCCCCAGAATGCAGCAAGATCAAGCCAAAAAGAATTCAACCGAAGTGGAGTTCTTCTCTGATTATGGCGATGCCAGTAGATACAAAATTCAGGAAGTAATCGGGAAAGGAAGTTATGGTGTGGTGTGTTCTGCAATTGACACTCGCACTGGTGACAAGGTTGCTATAAAGAAGATACATAATATTTTTGAGCATATATCTGATGCGGTCAGAATTCTTCGTGAGATAAAGCTTCTTAGACTTCTTCGCCATCCTGATATTGTTGAAATTAAACACATTATGCTGCCACCTTCAAGGAGGGACTTCAAAGACATCTACGTTGTTTTTGAGCTTATGGAATCAGATCTCCACCAAGTTATTAAAGCGAATGATGATCTGACTCGAGAACACTATCAGTTTTTCCTCTACCAACTACTTCGTGCATTAAAATATATCCATACAGCTAATGTCTACCATCGAGATTTAAAACCAAAGAATATATTAGCAAATGCAAATTGTAAACTTAAGATTTGTGATTTTGGATTGGCAAGAGTTGCCTTCAGTGACACACCAACAACAATTTTCTGGACGGATTATGTTGCTACTAGATGGTATCGAGCTCCAGAGCTATGCGGTTCATTTTTCTCCAAGTATACACCTGCAATTGATATATGGAGTATTGGCTGCATATTTGCTGAAGTATTAATGGGGAAGCCACTTTTTCCTGGTAAAAACGTTGTTCACCAGCTTGATTTGATGACGGATCTCCTTGGAACTCCTTCATTAGATACGATCTCCAGGGTACGTAATGATAAGGCCAGAAGATATTTAACTACTATGAGGAAAAAGCAGCCAGTGCCATTTGCTCAAAAGTTTCCAAATGCAGATCCCTTAGCGCTGAGGCTACTAGAAAGGTTGCTTGCTTTTGATCCAAAAGATAGGCCAACTGCTGAAGAGGCACTGGCCGATCCATACTTCAAGGGATTGGCAAAAATTGAGAGGGAACCTTCTTGCCAGCCAATCACAAAGATGGAATTTGAATTTGAGAGGCGGAGGGTCACAAAAGAAGACATTCAAGAGCTAATCTTCCGTGAGATACTAGAATATCATCCCCAGCTACTAAAAGACTACATGAACGGGACTGAGAGAACAAATTTTCTATATCCAAGTGCTGTTGACCAATTTAGGAAGCAGTTTGCACATCTAGAGGAAAATGGGGGTAAAAGTGCGCCAGTAATTCCTCTTGACAGAAAGCATGTGTCCCTCCCAAGGTCGACAGTTGTACACTCGAACACGGCCTATTCTAAGGACCAACTAAATAATGTACCCCTCCAAGATGGGAAGATCTCCGAAGAGGCATACAACAAGAATTCCCGAGATAGTGAAGGACGGCTAACAAATATATCAAGGGCCATGCAGGCACCACAAAAGATCCCATTCGCTAAGCCTGGTAGAGTGGTTGGACCAGTCATAGCAGATGAGAATGGAAGGCTAGTGAAGGAACCATACGATCCAAGAACGTTGATCAGAGGTCCCATTCTTCCTCCTGCATATCATTACCAAAAACCCATTGCAGGGAATCAAGAAAGATCGGCAGCAGAAACGAAACTGGATATTTCCTTGAGGGCCACCAAGCAAGCATCCCAGTGTGGCATGGCTTCTAAATTAGGAACAGACATAGCCATCAGCATCGATTCAAACCCCTTTTACATGACACGTGCAGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATCGATGCAAACTTCCTGCAGGCGAAGGCTGCCCAATACGGTGGTCTTGGTGCAGCAACCGCCACCACCACCTCGGTTGCTCACAGAAAGGTGGTTGCCGGTCAGTTTAGCATGACAAAGATGTACTGA 2091 43.66 MTWQPSGPPPQPHLHLNLGTHTDLGASIDSVDFELFRRSNSKGKSRLRGLSFFFLILDWFRFTSSSCLRIWTSPIFPRMQQDQAKKNSTEVEFFSDYGDASRYKIQEVIGKGSYGVVCSAIDTRTGDKVAIKKIHNIFEHISDAVRILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVTKEDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGGKSAPVIPLDRKHVSLPRSTVVHSNTAYSKDQLNNVPLQDGKISEEAYNKNSRDSEGRLTNISRAMQAPQKIPFAKPGRVVGPVIADENGRLVKEPYDPRTLIRGPILPPAYHYQKPIAGNQERSAAETKLDISLRATKQASQCGMASKLGTDIAISIDSNPFYMTRAGVNKVELKDQISIDANFLQAKAAQYGGLGAATATTTSVAHRKVVAGQFSMTKMY 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 41888913 41896113 - Lag0009741.1 Lac9g2254 621180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2254 696 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 100 435 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Lac9g2254 696 Gene3D Transferase(Phosphotransferase) domain 1 189 417 - -
Lac9g2254 696 FunFam Mitogen-activated protein kinase 93 196 - -
Lac9g2254 696 Gene3D Phosphorylase Kinase; domain 1 118 440 - -
Lac9g2254 696 ProSiteProfiles Protein kinase domain profile. 103 394 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g2254 696 FunFam Mitogen-activated protein kinase 189 417 - -
Lac9g2254 696 CDD STKc_TDY_MAPK 102 439 - -
Lac9g2254 696 SUPERFAMILY Protein kinase-like (PK-like) 99 398 IPR011009 -
Lac9g2254 696 ProSitePatterns Protein kinases ATP-binding region signature. 109 133 IPR017441 GO:0005524(InterPro)
Lac9g2254 696 Pfam Protein kinase domain 103 394 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g2254 696 ProSitePatterns MAP kinase signature. 138 241 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g2254 696 SMART serkin_6 103 394 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g1491 Lac-Chr13:15018366 Lac9g2254 Lac-Chr9:41888913 5.00E-187 dispersed
Lac1g1194 Lac-Chr1:30826377 Lac9g2254 Lac-Chr9:41888913 4.60E-38 dispersed
Lac3g0430 Lac-Chr3:3293053 Lac9g2254 Lac-Chr9:41888913 6.70E-199 dispersed
Lac5g1130 Lac-Chr5:19247458 Lac9g2254 Lac-Chr9:41888913 6.40E-13 dispersed
Lac5g2385 Lac-Chr5:42576233 Lac9g2254 Lac-Chr9:41888913 7.10E-205 dispersed
Lac7g2614 Lac-Chr7:44676305 Lac9g2254 Lac-Chr9:41888913 1.50E-94 dispersed
Lac8g2882 Lac-Chr8:45973936 Lac9g2254 Lac-Chr9:41888913 4.90E-30 dispersed
Lac9g2188 Lac-Chr9:41315927 Lac9g2254 Lac-Chr9:41888913 2.80E-45 dispersed
Lac9g2254 Lac-Chr9:41888913 Lac9g2934 Lac-Chr9:47124427 1.00E-43 dispersed
Lac12g2338 Lac-Chr12:40554997 Lac9g2254 Lac-Chr9:41888913 1.90E-210 transposed
Lac12g0862 Lac-Chr12:8924073 Lac9g2254 Lac-Chr9:41888913 1.60E-249 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86449 PF00069 Pkinase 2.00E-66 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2254 - - - 0.0