Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac9g2254 | ATGACGTGGCAACCATCGGGCCCACCTCCCCAACCCCATCTGCACCTAAATCTGGGAACACACACAGATCTTGGAGCTTCCATTGATTCGGTCGATTTCGAGTTATTTCGCCGCTCTAATTCGAAAGGGAAATCGAGGTTGAGGGGGTTGAGTTTCTTCTTCTTGATTTTGGATTGGTTTCGCTTCACCAGCTCTTCTTGCTTGAGAATTTGGACTTCCCCCATTTTCCCCAGAATGCAGCAAGATCAAGCCAAAAAGAATTCAACCGAAGTGGAGTTCTTCTCTGATTATGGCGATGCCAGTAGATACAAAATTCAGGAAGTAATCGGGAAAGGAAGTTATGGTGTGGTGTGTTCTGCAATTGACACTCGCACTGGTGACAAGGTTGCTATAAAGAAGATACATAATATTTTTGAGCATATATCTGATGCGGTCAGAATTCTTCGTGAGATAAAGCTTCTTAGACTTCTTCGCCATCCTGATATTGTTGAAATTAAACACATTATGCTGCCACCTTCAAGGAGGGACTTCAAAGACATCTACGTTGTTTTTGAGCTTATGGAATCAGATCTCCACCAAGTTATTAAAGCGAATGATGATCTGACTCGAGAACACTATCAGTTTTTCCTCTACCAACTACTTCGTGCATTAAAATATATCCATACAGCTAATGTCTACCATCGAGATTTAAAACCAAAGAATATATTAGCAAATGCAAATTGTAAACTTAAGATTTGTGATTTTGGATTGGCAAGAGTTGCCTTCAGTGACACACCAACAACAATTTTCTGGACGGATTATGTTGCTACTAGATGGTATCGAGCTCCAGAGCTATGCGGTTCATTTTTCTCCAAGTATACACCTGCAATTGATATATGGAGTATTGGCTGCATATTTGCTGAAGTATTAATGGGGAAGCCACTTTTTCCTGGTAAAAACGTTGTTCACCAGCTTGATTTGATGACGGATCTCCTTGGAACTCCTTCATTAGATACGATCTCCAGGGTACGTAATGATAAGGCCAGAAGATATTTAACTACTATGAGGAAAAAGCAGCCAGTGCCATTTGCTCAAAAGTTTCCAAATGCAGATCCCTTAGCGCTGAGGCTACTAGAAAGGTTGCTTGCTTTTGATCCAAAAGATAGGCCAACTGCTGAAGAGGCACTGGCCGATCCATACTTCAAGGGATTGGCAAAAATTGAGAGGGAACCTTCTTGCCAGCCAATCACAAAGATGGAATTTGAATTTGAGAGGCGGAGGGTCACAAAAGAAGACATTCAAGAGCTAATCTTCCGTGAGATACTAGAATATCATCCCCAGCTACTAAAAGACTACATGAACGGGACTGAGAGAACAAATTTTCTATATCCAAGTGCTGTTGACCAATTTAGGAAGCAGTTTGCACATCTAGAGGAAAATGGGGGTAAAAGTGCGCCAGTAATTCCTCTTGACAGAAAGCATGTGTCCCTCCCAAGGTCGACAGTTGTACACTCGAACACGGCCTATTCTAAGGACCAACTAAATAATGTACCCCTCCAAGATGGGAAGATCTCCGAAGAGGCATACAACAAGAATTCCCGAGATAGTGAAGGACGGCTAACAAATATATCAAGGGCCATGCAGGCACCACAAAAGATCCCATTCGCTAAGCCTGGTAGAGTGGTTGGACCAGTCATAGCAGATGAGAATGGAAGGCTAGTGAAGGAACCATACGATCCAAGAACGTTGATCAGAGGTCCCATTCTTCCTCCTGCATATCATTACCAAAAACCCATTGCAGGGAATCAAGAAAGATCGGCAGCAGAAACGAAACTGGATATTTCCTTGAGGGCCACCAAGCAAGCATCCCAGTGTGGCATGGCTTCTAAATTAGGAACAGACATAGCCATCAGCATCGATTCAAACCCCTTTTACATGACACGTGCAGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATCGATGCAAACTTCCTGCAGGCGAAGGCTGCCCAATACGGTGGTCTTGGTGCAGCAACCGCCACCACCACCTCGGTTGCTCACAGAAAGGTGGTTGCCGGTCAGTTTAGCATGACAAAGATGTACTGA | 2091 | 43.66 | MTWQPSGPPPQPHLHLNLGTHTDLGASIDSVDFELFRRSNSKGKSRLRGLSFFFLILDWFRFTSSSCLRIWTSPIFPRMQQDQAKKNSTEVEFFSDYGDASRYKIQEVIGKGSYGVVCSAIDTRTGDKVAIKKIHNIFEHISDAVRILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVTKEDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGGKSAPVIPLDRKHVSLPRSTVVHSNTAYSKDQLNNVPLQDGKISEEAYNKNSRDSEGRLTNISRAMQAPQKIPFAKPGRVVGPVIADENGRLVKEPYDPRTLIRGPILPPAYHYQKPIAGNQERSAAETKLDISLRATKQASQCGMASKLGTDIAISIDSNPFYMTRAGVNKVELKDQISIDANFLQAKAAQYGGLGAATATTTSVAHRKVVAGQFSMTKMY | 696 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 41888913 | 41896113 | - | Lag0009741.1 | Lac9g2254 | 621180 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac9g2254 | 696 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 100 | 435 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Lac9g2254 | 696 | Gene3D | Transferase(Phosphotransferase) domain 1 | 189 | 417 | - | - | |
Lac9g2254 | 696 | FunFam | Mitogen-activated protein kinase | 93 | 196 | - | - | |
Lac9g2254 | 696 | Gene3D | Phosphorylase Kinase; domain 1 | 118 | 440 | - | - | |
Lac9g2254 | 696 | ProSiteProfiles | Protein kinase domain profile. | 103 | 394 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac9g2254 | 696 | FunFam | Mitogen-activated protein kinase | 189 | 417 | - | - | |
Lac9g2254 | 696 | CDD | STKc_TDY_MAPK | 102 | 439 | - | - | |
Lac9g2254 | 696 | SUPERFAMILY | Protein kinase-like (PK-like) | 99 | 398 | IPR011009 | - | |
Lac9g2254 | 696 | ProSitePatterns | Protein kinases ATP-binding region signature. | 109 | 133 | IPR017441 | GO:0005524(InterPro) | |
Lac9g2254 | 696 | Pfam | Protein kinase domain | 103 | 394 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac9g2254 | 696 | ProSitePatterns | MAP kinase signature. | 138 | 241 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac9g2254 | 696 | SMART | serkin_6 | 103 | 394 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac13g1491 | Lac-Chr13:15018366 | Lac9g2254 | Lac-Chr9:41888913 | 5.00E-187 | dispersed | |
Lac1g1194 | Lac-Chr1:30826377 | Lac9g2254 | Lac-Chr9:41888913 | 4.60E-38 | dispersed | |
Lac3g0430 | Lac-Chr3:3293053 | Lac9g2254 | Lac-Chr9:41888913 | 6.70E-199 | dispersed | |
Lac5g1130 | Lac-Chr5:19247458 | Lac9g2254 | Lac-Chr9:41888913 | 6.40E-13 | dispersed | |
Lac5g2385 | Lac-Chr5:42576233 | Lac9g2254 | Lac-Chr9:41888913 | 7.10E-205 | dispersed | |
Lac7g2614 | Lac-Chr7:44676305 | Lac9g2254 | Lac-Chr9:41888913 | 1.50E-94 | dispersed | |
Lac8g2882 | Lac-Chr8:45973936 | Lac9g2254 | Lac-Chr9:41888913 | 4.90E-30 | dispersed | |
Lac9g2188 | Lac-Chr9:41315927 | Lac9g2254 | Lac-Chr9:41888913 | 2.80E-45 | dispersed | |
Lac9g2254 | Lac-Chr9:41888913 | Lac9g2934 | Lac-Chr9:47124427 | 1.00E-43 | dispersed | |
Lac12g2338 | Lac-Chr12:40554997 | Lac9g2254 | Lac-Chr9:41888913 | 1.90E-210 | transposed | |
Lac12g0862 | Lac-Chr12:8924073 | Lac9g2254 | Lac-Chr9:41888913 | 1.60E-249 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
86449 | PF00069 | Pkinase | 2.00E-66 | CL0016 | Lac | PK |
Pathway information
