Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac9g2273 | ATGAAGGAGAGTGGAAGAAAACAAGGCACTCTTTCACCGTGTGCAGCTTGTAAGCTTCTTCGTCGAAGATGTGCTCAAGATTGCGTTTTCGCCCCTTATTTTCCCGCTGACGAGCCTCACAAGTTCGCCAGCGTTCATAAAGTCTTCGGAGCGAGTAATGTCAACAAGATGTTGCAGGAGCTACCAGAGCACCAGCGAAGTGATGCGGTGAGCTCGATGGTATACGAGGCAAACGCAAGAGTGCGGGATCCAGTGTACGGTTGTGTCGGAGCCATATCGTCGCTACAACAACAAATCGATCTCTTGCAAACCCAGCTAGCGATTGCACAAGCGGAAGTGGTACACATGCGGATGCGCCAATTCCCGTCGCCCTCCAACCCAACCACCGGCCACTCGCCGGAAACCGCCTCGCCCTCGGGCAAGATGAACATTCCGGCACAAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAACATGGGGGAGTCCTTGTGGTCGTCTTGCTAG | 513 | 53.02 | MKESGRKQGTLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRQFPSPSNPTTGHSPETASPSGKMNIPAQNKSYFSMDMVDHDNMGESLWSSC | 170 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 42086121 | 42088033 | + | Lag0009760.1 | Lac9g2273 | 621199 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac9g2273 | 170 | Coils | Coil | 92 | 112 | - | - | |
Lac9g2273 | 170 | MobiDBLite | consensus disorder prediction | 120 | 142 | - | - | |
Lac9g2273 | 170 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 12 | 136 | - | - | |
Lac9g2273 | 170 | Pfam | Lateral organ boundaries (LOB) domain | 13 | 110 | IPR004883 | - | |
Lac9g2273 | 170 | ProSiteProfiles | LOB domain profile. | 12 | 113 | IPR004883 | - | |
Lac9g2273 | 170 | MobiDBLite | consensus disorder prediction | 121 | 142 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g1284 | Lac-Chr10:11430852 | Lac9g2273 | Lac-Chr9:42086121 | 1.90E-60 | dispersed | |
Lac13g1221 | Lac-Chr13:10860305 | Lac9g2273 | Lac-Chr9:42086121 | 2.20E-38 | dispersed | |
Lac8g2852 | Lac-Chr8:45705239 | Lac9g2273 | Lac-Chr9:42086121 | 2.00E-39 | dispersed | |
Lac9g2015 | Lac-Chr9:39749012 | Lac9g2273 | Lac-Chr9:42086121 | 1.20E-17 | dispersed | |
Lac9g2273 | Lac-Chr9:42086121 | Lac9g2362 | Lac-Chr9:42835271 | 1.10E-39 | dispersed | |
Lac12g0891 | Lac-Chr12:9335793 | Lac9g2273 | Lac-Chr9:42086121 | 7.60E-51 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
24479 | PF03195 | LOB | 8.50E-44 | No_clan | Lac | TF |
Pathway information
