Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2273 ATGAAGGAGAGTGGAAGAAAACAAGGCACTCTTTCACCGTGTGCAGCTTGTAAGCTTCTTCGTCGAAGATGTGCTCAAGATTGCGTTTTCGCCCCTTATTTTCCCGCTGACGAGCCTCACAAGTTCGCCAGCGTTCATAAAGTCTTCGGAGCGAGTAATGTCAACAAGATGTTGCAGGAGCTACCAGAGCACCAGCGAAGTGATGCGGTGAGCTCGATGGTATACGAGGCAAACGCAAGAGTGCGGGATCCAGTGTACGGTTGTGTCGGAGCCATATCGTCGCTACAACAACAAATCGATCTCTTGCAAACCCAGCTAGCGATTGCACAAGCGGAAGTGGTACACATGCGGATGCGCCAATTCCCGTCGCCCTCCAACCCAACCACCGGCCACTCGCCGGAAACCGCCTCGCCCTCGGGCAAGATGAACATTCCGGCACAAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAACATGGGGGAGTCCTTGTGGTCGTCTTGCTAG 513 53.02 MKESGRKQGTLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRQFPSPSNPTTGHSPETASPSGKMNIPAQNKSYFSMDMVDHDNMGESLWSSC 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 42086121 42088033 + Lag0009760.1 Lac9g2273 621199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2273 170 Coils Coil 92 112 - -
Lac9g2273 170 MobiDBLite consensus disorder prediction 120 142 - -
Lac9g2273 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 136 - -
Lac9g2273 170 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Lac9g2273 170 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Lac9g2273 170 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g1284 Lac-Chr10:11430852 Lac9g2273 Lac-Chr9:42086121 1.90E-60 dispersed
Lac13g1221 Lac-Chr13:10860305 Lac9g2273 Lac-Chr9:42086121 2.20E-38 dispersed
Lac8g2852 Lac-Chr8:45705239 Lac9g2273 Lac-Chr9:42086121 2.00E-39 dispersed
Lac9g2015 Lac-Chr9:39749012 Lac9g2273 Lac-Chr9:42086121 1.20E-17 dispersed
Lac9g2273 Lac-Chr9:42086121 Lac9g2362 Lac-Chr9:42835271 1.10E-39 dispersed
Lac12g0891 Lac-Chr12:9335793 Lac9g2273 Lac-Chr9:42086121 7.60E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24479 PF03195 LOB 8.50E-44 No_clan Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2273 - - - 0.0