Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2303 ATGAGGTTAATGGCAATGGCAATGGCTTCCTTTGCTCTCTTCCTCCTCCTTCATCTTCATTTGGTCATGGCGGAACCTGTCGTTCAGCCTCGGAATATTACCGCCACCTCTCTGGCGAGTCGTGTATCACCACCACCCGCTGCTCTATTGTCGCACACTTTTTATCATCGGACATGCCCAGACGTCGAGGGCATAATCCATCGTAGAGTGCTTGCTTGGATCAATAAGGATTTCACGTTGGCTCCTGCTCTTATTCGCTTGCATTTCCACGATTGTGCGGTTAGGGGATGCGACGCATCGGTTCTACTAAACTATCGAAGAAGCGAAAGAAGAGCCTACGCCAGCAGAACCCTCAGGGGATTCCATGTGATCGACGATATCAAGGCCGAGCTCGAGAGAAAATGCCCTAAAACCGTCTCCTGCTCCGACATCCTCACCACCGCCGCCAGAGACGCCACCATTCTCGCCGGAGGTCCGTTCTGGGAGGTTCCTTTTGGCCGTAAGGATGGAAGAATCTCCATCGCCGCCGAAGCAGAGCGCGTTCCTCAGGGCCACGAAAACGTCACCGCTTTGATCGACTACTTCCGAACTCTAGGGCTCGACGTCCTCGATTTGGTCGCCCTCTCCGGCGCCCACACCATCGGCCGAGCCGCCTGCCACACCTTCAAAGACAGGCTCTACAACTTCAACCGGACTCTGAAGCCCGACCCGATTCTGAAACCTCCATTCCTGAATTTGCTTCGACGGCAGTGTAAGAACGATATGGACCTCGTTTTTCTCGACGCGACGACTCCGAGAATGTTCGATACTGTTTACTTCACGAACCTTCAGAAGAAATTAGGGCTTCTTTCGACGGATCAAGCGCTGTTCTCAGATGAAAGAACTTCTTCGTTTGTGGATTTGATGGCGAATCAACCGTTTCTGTTTGATAGCCAATTCGCGTCGTCGATGGTGAAATTGGGGAATGTGGGAGTGCTCACGAGGAAAAATGAAGGCGAAATTCGAGTCAATTGCAATTTCGTCAATCCCAGAAGGAAGTGA 1041 51.87 MRLMAMAMASFALFLLLHLHLVMAEPVVQPRNITATSLASRVSPPPAALLSHTFYHRTCPDVEGIIHRRVLAWINKDFTLAPALIRLHFHDCAVRGCDASVLLNYRRSERRAYASRTLRGFHVIDDIKAELERKCPKTVSCSDILTTAARDATILAGGPFWEVPFGRKDGRISIAAEAERVPQGHENVTALIDYFRTLGLDVLDLVALSGAHTIGRAACHTFKDRLYNFNRTLKPDPILKPPFLNLLRRQCKNDMDLVFLDATTPRMFDTVYFTNLQKKLGLLSTDQALFSDERTSSFVDLMANQPFLFDSQFASSMVKLGNVGVLTRKNEGEIRVNCNFVNPRRK 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 42385509 42387747 - Lag0009790.1 Lac9g2303 621229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2303 346 Gene3D - 53 342 - -
Lac9g2303 346 ProSiteProfiles Plant heme peroxidase family profile. 49 342 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 CDD secretory_peroxidase 50 341 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac9g2303 346 ProSitePatterns Peroxidases active site signature. 81 92 IPR019794 GO:0004601(InterPro)
Lac9g2303 346 Pfam Peroxidase 69 304 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Haem peroxidase superfamily signature 81 95 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Haem peroxidase superfamily signature 261 276 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Plant peroxidase signature 259 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Plant peroxidase signature 59 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Plant peroxidase signature 315 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Plant peroxidase signature 83 103 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PRINTS Plant peroxidase signature 275 292 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 SUPERFAMILY Heme-dependent peroxidases 50 343 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 PANTHER - 43 342 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2303 346 FunFam Peroxidase 182 320 - -
Lac9g2303 346 Gene3D Peroxidase, domain 2 182 320 - -
Lac9g2303 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Lac9g2303 346 FunFam Peroxidase 53 192 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0621 Lac-Chr10:4761504 Lac9g2303 Lac-Chr9:42385509 1.00E-105 dispersed
Lac9g2303 Lac-Chr9:42385509 Lac9g2883 Lac-Chr9:46755861 1.50E-64 dispersed
Lac9g2303 Lac-Chr9:42385509 Lac1g2545 Lac-Chr1:46818589 7.70E-69 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2303 K00430 - csv:101204209 559.681