Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2324 ATGGATCTCCTCCTCCTGGAGAAGACTCTAATCGGCCTCTTCGTCGCGGTGGTTCTCGCCATTGCCATTTCCAAACTCCGCGGCAAGCGGTTCAAGCTTCCGCCGGGGCCGTTGCCGGTGCCGATCTTCGGTAACTGGCTCCAAGTCGGTGATGATTTGAACCACCGCAATCTGACGGATCTCGCCAAGAAATTCGGCGATATCTTCTTGCTTCGGATGGGACAGAGGAACCTCGTGGTGGTTTCCTCGCCGGAACTGGCCAAGGAAGTGCTCCATACTCAGGGAGTCGAGTTCGGATCTCGAACCAGAAACGTCGTCTTCGATATCTTCACCGGAAAAGGTCAGGATATGGTTTTCACCGTCTATGGCGAGCACTGGAGGAAAATGAGACGTATCATGACGGTTCCGTTTTTCACCAACAAAGTGGTCCAGCAATACCGTCACGGATGGGAGGCCGAGGCCGCAAGCGTCGTGGAGGACGTTAAGAAGAATCCAGACTCCGCGACGACTGGAATCGTTCTCCGACGGCGGTTGCAGCTTATGATGTACAACAACATGTACAGGATTATGTTCGATAGAAGATTCGAGAGTGAAGACGATCCTCTGTTCCTCAAACTCAGGGCTCTGAACGGAGAGAGGAGCCGATTGGCGCAGAGCTTCGATTACAATTATGGCGATTTCATCCCGATCTTGAGGCCGTTCTTGAGAGGTTATCTCAAAATCTGCAAGGAAGTCAAGGAAACAAGGCTGAAACTCTTCAAGGATTATTTCGTAGAGGAGAGGAAGAAACTGGCGAATACTAAGACCACGACGAACGAGGGATTGAAATGTGCGATTGATCACATATTGGATGCGCAACAGAAGGGAGAAATCAACGAAGACAATGTGCTTTACATTGTTGAGAACATTAACGTTGCAGCGATTGAAACAACATTGTGGTCAATCGAATGGGGAATTGCCGAACTGGTAAACCACCCTGAAATCCAAAGGAAGTTGAGGAATGAGCTCGACACCGTACTTGGACCTGGCGTCCCGATCACCGAGCCCGACACCTACAAGCTCCCTTACCTCCAAGCCGTGATCAAGGAGACCCTCCGCCTTCGCATGGCCATCCCCTTGCTCGTGCCCCACATGAACCTCCACGACGCCAAGCTCGCTGGCTACGACATTCCTGCCGAGAGCAAGATCTTAGTCAATGCCTGGTGGCTCGCCAACAACCCTGCCAACTGGAAGAACCCGGAAGAGTTCCGCCCCGAGAGGTTCTTGGAGGAGGAATCTAAGGTCGAGGCCAATGGCAACGATTTTCGATACCTTCCCTTCGGCGTCGGTCGACGAAGCTGCCCTGGCATCATCTTGGCTTTGCCGATCCTTGGCATTACAATTGGGCGTTTGGTTCAGAACTTTGAGCTCCTGCCTCCTCCTGGACAATCGAAGTTGGACACTTCAGAGAAAGGTGGGCAATTTAGCTTGCACATTTTGAAGCACTCCACCATTGTTGCTAAGCCAAGGGTTTTCTAG 1518 51.84 MDLLLLEKTLIGLFVAVVLAIAISKLRGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWEAEAASVVEDVKKNPDSATTGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFLKLRALNGERSRLAQSFDYNYGDFIPILRPFLRGYLKICKEVKETRLKLFKDYFVEERKKLANTKTTTNEGLKCAIDHILDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQRKLRNELDTVLGPGVPITEPDTYKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPANWKNPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKLDTSEKGGQFSLHILKHSTIVAKPRVF 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 42579470 42581810 + Lag0009811.1 Lac9g2324 621250
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2324 505 Pfam Cytochrome P450 34 496 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac9g2324 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 CDD CYP73 63 496 - -
Lac9g2324 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 Gene3D Cytochrome P450 23 495 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac9g2324 505 FunFam Trans-cinnamate 4-monooxygenase 23 497 - -
Lac9g2324 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 503 - GO:0004497(PANTHER)|GO:0009808(PANTHER)|GO:0016710(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g2209 Lac-Chr6:38606283 Lac9g2324 Lac-Chr9:42579470 2.90E-184 dispersed
Lac6g2210 Lac-Chr6:38619470 Lac9g2324 Lac-Chr9:42579470 8.80E-189 dispersed
Lac9g2324 Lac-Chr9:42579470 Lac10g0503 Lac-Chr10:3855639 7.10E-71 dispersed
Lac7g2916 Lac-Chr7:48199061 Lac9g2324 Lac-Chr9:42579470 2.60E-249 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2324 K00487 - csv:101221846 970.689